FFCP PHASE1:Hg19::chr7:71557606..71557611,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1520 | |||
|description=CAGE_peak_at_chr7:71557606..71557611,- | |||
|id=chr7:71557606..71557611,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.67e-23;3!UBERON:0010122;1.38e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.88e-31!57;UBERON:0005068!4.88e-31!57;UBERON:0006241!4.88e-31!57;UBERON:0007135!4.88e-31!57;UBERON:0002616!2.38e-27!59;UBERON:0001893!3.54e-25!34;UBERON:0000073!1.81e-24!94;UBERON:0001016!1.81e-24!94;UBERON:0000955!6.01e-24!69;UBERON:0006238!6.01e-24!69;UBERON:0002791!1.58e-23!33;UBERON:0002020!8.43e-23!34;UBERON:0003528!8.43e-23!34;UBERON:0005743!1.63e-22!86;UBERON:0001017!2.24e-22!82;UBERON:0002780!2.51e-22!41;UBERON:0001890!2.51e-22!41;UBERON:0006240!2.51e-22!41;UBERON:0003080!1.13e-21!42;UBERON:0001869!1.25e-21!32;UBERON:0002346!3.05e-21!90;UBERON:0003075!4.93e-21!86;UBERON:0007284!4.93e-21!86;UBERON:0007023!9.20e-19!115;UBERON:0003056!9.35e-15!61;UBERON:0000153!1.24e-14!129;UBERON:0007811!1.24e-14!129;UBERON:0002420!3.51e-14!9;UBERON:0007245!3.51e-14!9;UBERON:0010009!3.51e-14!9;UBERON:0010011!3.51e-14!9;UBERON:0000454!3.51e-14!9;UBERON:0002619!4.23e-14!22;UBERON:0002308!5.38e-14!9;UBERON:0000125!5.38e-14!9;UBERON:0009663!8.72e-14!7;UBERON:0001950!4.07e-13!20;UBERON:0000924!8.33e-13!173;UBERON:0006601!8.33e-13!173;UBERON:0004121!1.95e-12!169;UBERON:0000033!3.41e-12!123;UBERON:0000956!3.75e-12!25;UBERON:0000203!3.75e-12!25;UBERON:0002298!2.28e-11!8;UBERON:0000369!2.71e-11!4;UBERON:0002435!2.71e-11!4;UBERON:0000204!2.71e-11!4;UBERON:0010082!2.71e-11!4;UBERON:0003076!1.62e-10!15;UBERON:0003057!1.62e-10!15;UBERON:0004733!2.63e-10!12;UBERON:0002028!2.63e-10!12;UBERON:0007277!2.63e-10!12;UBERON:0004732!1.99e-09!13;UBERON:0005383!3.39e-09!3;UBERON:0005382!3.39e-09!3;UBERON:0001896!7.46e-09!3;UBERON:0005290!7.46e-09!3;UBERON:0010096!7.46e-09!3;UBERON:0001873!4.73e-07!2;UBERON:0010122!4.73e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.91e-12;6!UBERON:0000922;7.03e-10;49!UBERON:0000955;7.77e-10;68!UBERON:0002370;1.38e-09;2!UBERON:0001873;1.38e-09;2!UBERON:0005058;1.38e-09;2!UBERON:0009113;1.38e-09;2!UBERON:0000073;8.54e-09;53!UBERON:0002616;8.54e-09;53!UBERON:0002680;1.77e-08;9!UBERON:0001895;1.77e-08;9!UBERON:0002791;8.64e-08;32!UBERON:0001016;1.05e-07;83!UBERON:0001869;1.10e-07;32!UBERON:0001950;1.10e-07;20!UBERON:0001017;1.79e-07;75!UBERON:0003528;4.52e-07;34!UBERON:0002020;4.52e-07;34!UBERON:0002619;4.63e-07;22!UBERON:0002780;8.08e-07;41!UBERON:0001890;8.08e-07;41!UBERON:0002114;8.38e-07;2!UBERON:0005383;8.38e-07;3!UBERON:0005382;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.91e-12,6;UBERON:0006215,2.91e-12,6;UBERON:0000955,3.03e-11,68;UBERON:0006238,3.03e-11,68;UBERON:0000073,7.08e-11,53;UBERON:0002616,7.08e-11,53;UBERON:0001049,2.71e-10,56;UBERON:0005068,2.71e-10,56;UBERON:0006241,2.71e-10,56;UBERON:0007135,2.71e-10,56;UBERON:0001873,1.22e-09,2;UBERON:0010122,1.22e-09,2;UBERON:0001017,2.03e-09,81;UBERON:0002680,1.77e-08,9;UBERON:0001895,1.77e-08,9;UBERON:0010092,1.77e-08,9;UBERON:0001016,1.88e-08,89;UBERON:0002791,2.79e-08,32;UBERON:0001869,2.79e-08,32;UBERON:0003528,8.02e-08,34;UBERON:0002020,8.02e-08,34;UBERON:0001893,8.02e-08,34;UBERON:0001950,1.25e-07,20;UBERON:0002619,5.20e-07,22;UBERON:0003075,5.44e-07,82;UBERON:0007284,5.44e-07,82;UBERON:0005383,7.70e-07,3;UBERON:0005382,7.70e-07,3;UBERON:0002114,8.15e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0.254253650292766,0,1.03423011972439,0,0,0.885741385813839,1.32656082487949,0,2.76448149828062,2.95547618953547,0,0,0,0.230850775511391,0,0,0,0.54323685961004,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0.067401132980677,0,0,0,0,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0.275078873194468,0,0.2249738915515,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.221858103073705,0.310482014706917,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0.895260599125562,0.107824811396682,0,0.54604819096007,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.128458450192919,0,0.319267718114302,0,1.26035848110859,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.126831620387814,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20934568419972,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.0679914901909147,1.30905207102113,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0.378893491091197,1.33982065078089,0,0.20686599172379,0,0.952257725854961,0.839655827868079,1.86224142887574,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr7:71557606..71557611,- | |||
}} |
Revision as of 17:17, 22 January 2014
Short description: | p@chr7:71557606..71557611, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:71557606..71557611, - |
Coexpression cluster: | C1520_cerebellum_parietal_occipital_temporal_duodenum_middle_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.91e-12 | 6 |
rhombic lip | 2.91e-12 | 6 |
brain | 3.03e-11 | 68 |
future brain | 3.03e-11 | 68 |
regional part of nervous system | 7.08e-11 | 53 |
regional part of brain | 7.08e-11 | 53 |
neural tube | 2.71e-10 | 56 |
neural rod | 2.71e-10 | 56 |
future spinal cord | 2.71e-10 | 56 |
neural keel | 2.71e-10 | 56 |
caudate nucleus | 1.22e-09 | 2 |
future caudate nucleus | 1.22e-09 | 2 |
central nervous system | 2.03e-09 | 81 |
regional part of metencephalon | 1.77e-08 | 9 |
metencephalon | 1.77e-08 | 9 |
future metencephalon | 1.77e-08 | 9 |
nervous system | 1.88e-08 | 89 |
regional part of telencephalon | 2.79e-08 | 32 |
cerebral hemisphere | 2.79e-08 | 32 |
brain grey matter | 8.02e-08 | 34 |
gray matter | 8.02e-08 | 34 |
telencephalon | 8.02e-08 | 34 |
neocortex | 1.25e-07 | 20 |
regional part of cerebral cortex | 5.20e-07 | 22 |
neural plate | 5.44e-07 | 82 |
presumptive neural plate | 5.44e-07 | 82 |
caudate-putamen | 7.70e-07 | 3 |
dorsal striatum | 7.70e-07 | 3 |
duodenum | 8.15e-07 | 2 |