FFCP PHASE1:Hg19::chrX:46404931..46404964,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=401588 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc004dgs.3_5end | |||
|description=CAGE_peak_1_at_LOC401588_5end | |||
|id=chrX:46404931..46404964,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.89e-11!45;CL:0002057!4.57e-10!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.08e-09;33!CL:0002057;6.08e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.43e-10,42;CL:0002057,6.43e-10,42 | |||
|ontology_enrichment_development_v019=CL:0002057;2.91e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.67e-10!82;UBERON:0001049!5.69e-10!57;UBERON:0005068!5.69e-10!57;UBERON:0006241!5.69e-10!57;UBERON:0007135!5.69e-10!57;UBERON:0000955!6.45e-10!69;UBERON:0006238!6.45e-10!69;UBERON:0005743!9.02e-10!86;UBERON:0003075!6.05e-09!86;UBERON:0007284!6.05e-09!86;UBERON:0002346!9.01e-09!90;UBERON:0002780!9.31e-09!41;UBERON:0001890!9.31e-09!41;UBERON:0006240!9.31e-09!41;UBERON:0002616!1.07e-08!59;UBERON:0000073!1.16e-08!94;UBERON:0001016!1.16e-08!94;UBERON:0003080!2.25e-08!42;UBERON:0003056!4.30e-08!61;UBERON:0002791!9.81e-08!33;UBERON:0001893!1.05e-07!34;UBERON:0002020!1.07e-07!34;UBERON:0003528!1.07e-07!34;UBERON:0001869!6.29e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.81e-07;41!UBERON:0001890;1.81e-07;41!UBERON:0001893;4.79e-07;34!UBERON:0002791;7.61e-07;32!UBERON:0000073;8.01e-07;53!UBERON:0002616;8.01e-07;53!UBERON:0003528;9.65e-07;34!UBERON:0002020;9.65e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.56e-10,56;UBERON:0005068,2.56e-10,56;UBERON:0006241,2.56e-10,56;UBERON:0007135,2.56e-10,56;UBERON:0001017,2.97e-10,81;UBERON:0000955,3.16e-10,68;UBERON:0006238,3.16e-10,68;UBERON:0000073,3.20e-10,53;UBERON:0002616,3.20e-10,53;UBERON:0003075,4.30e-09,82;UBERON:0007284,4.30e-09,82;UBERON:0001016,5.34e-09,89;UBERON:0002346,7.56e-09,86;UBERON:0002780,1.09e-08,41;UBERON:0001890,1.09e-08,41;UBERON:0003080,1.09e-08,41;UBERON:0006240,1.09e-08,41;UBERON:0003056,7.46e-08,61;UBERON:0001893,1.54e-07,34;UBERON:0003528,1.58e-07,34;UBERON:0002020,1.58e-07,34;UBERON:0002791,3.25e-07,32;UBERON:0001869,9.21e-07,32 | |||
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| |||
|short_description=p1@LOC401588 | |||
}} |
Revision as of 05:26, 23 January 2014
Short description: | p1@LOC401588 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC401588_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc004dgs.3_5end |
EntrezGene: | LOC401588 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.43e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.43e-10 | 42 |
Ontology term | p-value | n |
---|---|---|
neural tube | 2.56e-10 | 56 |
neural rod | 2.56e-10 | 56 |
future spinal cord | 2.56e-10 | 56 |
neural keel | 2.56e-10 | 56 |
central nervous system | 2.97e-10 | 81 |
brain | 3.16e-10 | 68 |
future brain | 3.16e-10 | 68 |
regional part of nervous system | 3.20e-10 | 53 |
regional part of brain | 3.20e-10 | 53 |
neural plate | 4.30e-09 | 82 |
presumptive neural plate | 4.30e-09 | 82 |
nervous system | 5.34e-09 | 89 |
neurectoderm | 7.56e-09 | 86 |
regional part of forebrain | 1.09e-08 | 41 |
forebrain | 1.09e-08 | 41 |
anterior neural tube | 1.09e-08 | 41 |
future forebrain | 1.09e-08 | 41 |
pre-chordal neural plate | 7.46e-08 | 61 |
telencephalon | 1.54e-07 | 34 |
brain grey matter | 1.58e-07 | 34 |
gray matter | 1.58e-07 | 34 |
regional part of telencephalon | 3.25e-07 | 32 |
cerebral hemisphere | 9.21e-07 | 32 |