FFCP PHASE1:Hg19::chr10:105880675..105880704,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:105880675..105880704,- to FFCP PHASE1:Hg19::chr10:105880675..105880704,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:105880675..105880704,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:105880675..105880704,- | |||
|id=chr10:105880675..105880704,- | |||
|ontology_enrichment_celltype=CL:0002057!5.55e-56!42;CL:0000860!1.64e-53!45;CL:0000738!3.87e-50!140;CL:0002031!2.55e-42!124;CL:0002087!9.52e-42!119;CL:0000766!4.17e-41!76;CL:0000557!2.61e-38!71;CL:0000037!2.07e-37!172;CL:0000566!2.07e-37!172;CL:0002009!4.01e-37!65;CL:0000839!2.00e-35!70;CL:0002194!5.81e-35!63;CL:0000576!5.81e-35!63;CL:0000040!5.81e-35!63;CL:0000559!5.81e-35!63;CL:0000988!5.67e-34!182;CL:0002032!1.23e-33!165;CL:0000837!1.23e-33!165;CL:0000763!6.83e-26!112;CL:0000049!6.83e-26!112;CL:0000134!4.66e-18!358;CL:0002320!8.37e-18!365;CL:0000048!1.19e-14!430;CL:0000219!1.35e-14!390;CL:0000034!1.49e-14!444;CL:0000723!4.76e-14!436;CL:0002393!1.06e-12!9;CL:0002397!1.06e-12!9;CL:0002371!3.52e-10!591;CL:0000063!3.99e-10!578;CL:0000144!6.29e-09!625;CL:0000012!7.65e-09!682;CL:0000548!6.73e-08!679;CL:0000004!6.73e-08!679;CL:0000255!6.73e-08!679;CL:0000838!1.00e-07!52;CL:0000542!1.80e-07!53;CL:0000051!1.80e-07!53;CL:0000003!1.95e-07!722;CL:0000084!6.61e-07!25;CL:0000827!6.61e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.06e-60;33!CL:0002057;1.06e-60;33!CL:0000473;3.44e-42;39!CL:0000234;3.44e-42;39!CL:0000576;1.43e-39;48!CL:0000766;5.41e-32;69!CL:0002087;4.55e-19;104!CL:0002393;8.19e-14;6!CL:0002397;8.19e-14;6!CL:0000763;1.10e-13;100!CL:0000738;4.79e-12;136!CL:0000623;1.80e-11;3!CL:0000767;3.47e-11;3!CL:0000094;9.89e-11;8!CL:0000988;5.94e-09;177!CL:0000624;1.49e-08;6!CL:0000791;6.61e-08;18!CL:0000789;6.61e-08;18!CL:0002419;6.61e-08;18!CL:0000771;6.75e-08;2!CL:0000081;1.06e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.62e-76,42;CL:0002057,1.62e-76,42;CL:0000473,7.10e-66,48;CL:0000234,7.10e-66,48;CL:0000766,8.80e-66,72;CL:0000738,9.44e-64,136;CL:0000557,2.38e-56,67;CL:0000839,5.59e-54,66;CL:0002031,7.11e-54,120;CL:0002009,2.26e-52,61;CL:0002087,1.14e-51,115;CL:0000037,1.71e-51,168;CL:0002194,5.55e-51,59;CL:0000576,5.55e-51,59;CL:0000040,5.55e-51,59;CL:0000559,5.55e-51,59;CL:0000988,2.79e-48,177;CL:0002032,9.42e-48,161;CL:0000837,9.42e-48,161;CL:0000763,4.93e-43,108;CL:0000049,4.93e-43,108;CL:0000134,3.71e-19,354;CL:0002320,1.51e-18,361;CL:0000219,2.11e-16,386;CL:0000034,1.16e-14,441;CL:0000048,8.89e-14,427;CL:0000723,2.05e-13,433;CL:0002393,1.43e-12,9;CL:0002397,1.43e-12,9;CL:0000623,1.77e-11,3;CL:0000825,1.77e-11,3;CL:0000767,3.53e-11,3;CL:0000094,9.31e-11,8;CL:0000624,1.09e-08,6;CL:0000791,5.56e-08,18;CL:0000789,5.56e-08,18;CL:0002420,5.56e-08,18;CL:0002419,5.56e-08,18;CL:0000790,5.56e-08,18;CL:0000771,5.99e-08,2;CL:0000081,1.01e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.04e-55;42!CL:0000049;5.57e-10;108!CL:0000790;6.61e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.55e-35!80;UBERON:0001474!6.74e-32!86;UBERON:0002390!6.87e-31!102;UBERON:0003061!6.87e-31!102;UBERON:0002193!1.50e-26!112;UBERON:0004765!6.24e-26!101;UBERON:0001434!6.24e-26!101;UBERON:0002405!7.24e-23!115;UBERON:0002384!3.55e-17!375;UBERON:0003081!9.48e-14!216;UBERON:0002204!1.45e-13!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.50e-51,76;UBERON:0001474,3.92e-47,82;UBERON:0002390,3.66e-45,98;UBERON:0003061,3.66e-45,98;UBERON:0002405,6.19e-43,93;UBERON:0004765,3.76e-42,90;UBERON:0002193,4.28e-40,108;UBERON:0001434,4.91e-37,100;UBERON:0002204,1.57e-18,167;UBERON:0002384,1.02e-17,371;UBERON:0003081,8.34e-17,203;UBERON:0000926,3.65e-08,315;UBERON:0004120,3.65e-08,315;UBERON:0006603,3.65e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,9.04737836752479,7.67658796194425,6.19264493264304,0,0.6024118375565,0,0,0.142169232487422,1.17440175733939,7.75593571944628,9.02450013615638,7.37836960433896,0,0,0,0.726991193897824,1.51150377475524,1.21292030593908,3.48643555358527,2.46700732813095,8.6717783850629,8.34307937734236,4.35473201099471,15.8443094025352,27.2349087781929,18.719055823931,25.7310324529249,2.63539275359647,0.818718450173537,6.29225756446237,32.4448925913157,23.4278189765548,37.0815532963444,0.329851300186716,0.997318288108159,2.55734850319616,18.2831820336008,8.5107783703671,19.3074897188628,2.51248665256743,1.5644487552606,8.25317609879443,8.47559303686716,14.7311054395026,30.3803891943249,1.26753171787165,1.06302149982522,0.838634582033504,0.112328631146495,0.150176892841506,0,0.285012743741249,0.19891667719909,1.0959849225878,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,1.17447437874188,1.14681968437569,2.64342657158052,3.36305137788922,0,1.57367816091066,1.57204305099666,2.46721798799411,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,1.53288197440768,1.03088233644789,1.01207876807801,0.318565414324097,0,0,0.150575119077773,0,0,0,0,4.23374160771938,4.54648332831962,3.47578569318718,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,2.63560834872127,11.6334079244498,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447792613514241,0,0.383382679165211,0,0,1.24396869324463,1.58531948758658,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,12.0188763723176,9.9188684435378,8.47064039446339,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,2.15714200818617,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.601519410909855,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0.37064843820784,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0,0,0,0,0.494411622680279,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.2249738915515,2.32140586367385,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.50313580350515,0,0.228840068396924,0.151230923763239,0.777186002913902,0,0,0,0,1.65882483136342,0,0,0.300515217994437,0,0.406870733204662,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0.211312123358627,0.19998739585493,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.3414369541879,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,9.04737836752479,7.67658796194425,6.19264493264304,0,0.6024118375565,0,0,0.142169232487422,1.17440175733939,7.75593571944628,9.02450013615638,7.37836960433896,0,0,0,0.726991193897824,1.51150377475524,1.21292030593908,3.48643555358527,2.46700732813095,8.6717783850629,8.34307937734236,4.35473201099471,15.8443094025352,27.2349087781929,18.719055823931,25.7310324529249,2.63539275359647,0.818718450173537,6.29225756446237,32.4448925913157,23.4278189765548,37.0815532963444,0.329851300186716,0.997318288108159,2.55734850319616,18.2831820336008,8.5107783703671,19.3074897188628,2.51248665256743,1.5644487552606,8.25317609879443,8.47559303686716,14.7311054395026,30.3803891943249,1.26753171787165,1.06302149982522,0.838634582033504,0.112328631146495,0.150176892841506,0,0.285012743741249,0.19891667719909,1.0959849225878,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,1.17447437874188,1.14681968437569,2.64342657158052,3.36305137788922,0,1.57367816091066,1.57204305099666,2.46721798799411,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,1.53288197440768,1.03088233644789,1.01207876807801,0.318565414324097,0,0,0.150575119077773,0,0,0,0,4.23374160771938,4.54648332831962,3.47578569318718,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,2.63560834872127,11.6334079244498,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447792613514241,0,0.383382679165211,0,0,1.24396869324463,1.58531948758658,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,12.0188763723176,9.9188684435378,8.47064039446339,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,2.15714200818617,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.601519410909855,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0.37064843820784,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0,0,0,0,0.494411622680279,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.2249738915515,2.32140586367385,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.50313580350515,0,0.228840068396924,0.151230923763239,0.777186002913902,0,0,0,0,1.65882483136342,0,0,0.300515217994437,0,0.406870733204662,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0.211312123358627,0.19998739585493,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.3414369541879,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:105880675..105880704,- | |||
}} | }} |
Latest revision as of 10:06, 23 July 2015
Short description: | p@chr10:105880675..105880704, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105880675..105880704, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.50e-51 | 76 |
bone element | 3.92e-47 | 82 |
hematopoietic system | 3.66e-45 | 98 |
blood island | 3.66e-45 | 98 |
immune system | 6.19e-43 | 93 |
skeletal element | 3.76e-42 | 90 |
hemolymphoid system | 4.28e-40 | 108 |
skeletal system | 4.91e-37 | 100 |
musculoskeletal system | 1.57e-18 | 167 |
connective tissue | 1.02e-17 | 371 |
lateral plate mesoderm | 8.34e-17 | 203 |
mesoderm | 3.65e-08 | 315 |
mesoderm-derived structure | 3.65e-08 | 315 |
presumptive mesoderm | 3.65e-08 | 315 |