FFCP PHASE1:Hg19::chr10:106006943..106006961,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:106006943..106006961,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr10:106006943..106006961,+ | |description=CAGE_peak_at_chr10:106006943..106006961,+ | ||
|id=chr10:106006943..106006961,+ | |id=chr10:106006943..106006961,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.88e-95!42;CL:0000860!4.96e-88!45;CL:0002194!7.45e-80!63;CL:0000576!7.45e-80!63;CL:0000040!7.45e-80!63;CL:0000559!7.45e-80!63;CL:0000766!1.86e-79!76;CL:0002009!5.50e-77!65;CL:0000839!1.60e-73!70;CL:0000557!2.71e-72!71;CL:0000738!1.52e-64!140;CL:0002087!2.72e-59!119;CL:0000763!2.79e-55!112;CL:0000049!2.79e-55!112;CL:0000037!1.26e-52!172;CL:0000566!1.26e-52!172;CL:0002031!1.00e-51!124;CL:0000988!9.69e-49!182;CL:0002032!2.44e-46!165;CL:0000837!2.44e-46!165;CL:0002393!9.51e-21!9;CL:0002397!9.51e-21!9;CL:0000134!7.59e-20!358;CL:0002320!4.16e-19!365;CL:0000219!3.04e-17!390;CL:0000048!2.87e-16!430;CL:0000034!6.36e-16!444;CL:0000723!8.85e-16!436;CL:0000767!2.00e-08!3;CL:0000842!8.29e-08!3;CL:0000875!1.37e-07!3;CL:0002396!1.37e-07!3;CL:0002371!1.61e-07!591;CL:0000784!2.26e-07!3;CL:0000623!4.48e-07!3;CL:0000825!4.48e-07!3 | |ontology_enrichment_celltype=CL:0002057!2.88e-95!42;CL:0000860!4.96e-88!45;CL:0002194!7.45e-80!63;CL:0000576!7.45e-80!63;CL:0000040!7.45e-80!63;CL:0000559!7.45e-80!63;CL:0000766!1.86e-79!76;CL:0002009!5.50e-77!65;CL:0000839!1.60e-73!70;CL:0000557!2.71e-72!71;CL:0000738!1.52e-64!140;CL:0002087!2.72e-59!119;CL:0000763!2.79e-55!112;CL:0000049!2.79e-55!112;CL:0000037!1.26e-52!172;CL:0000566!1.26e-52!172;CL:0002031!1.00e-51!124;CL:0000988!9.69e-49!182;CL:0002032!2.44e-46!165;CL:0000837!2.44e-46!165;CL:0002393!9.51e-21!9;CL:0002397!9.51e-21!9;CL:0000134!7.59e-20!358;CL:0002320!4.16e-19!365;CL:0000219!3.04e-17!390;CL:0000048!2.87e-16!430;CL:0000034!6.36e-16!444;CL:0000723!8.85e-16!436;CL:0000767!2.00e-08!3;CL:0000842!8.29e-08!3;CL:0000875!1.37e-07!3;CL:0002396!1.37e-07!3;CL:0002371!1.61e-07!591;CL:0000784!2.26e-07!3;CL:0000623!4.48e-07!3;CL:0000825!4.48e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.25e-105;33!CL:0002057;4.25e-105;33!CL:0000473;3.29e-81;39!CL:0000234;3.29e-81;39!CL:0000576;6.59e-78;48!CL:0000766;1.43e-52;69!CL:0000763;1.06e-22;100!CL:0002393;3.65e-22;6!CL:0002397;3.65e-22;6!CL:0002087;3.63e-21;104!CL:0000738;1.55e-15;136!CL:0000767;3.52e-12;3!CL:0000226;3.28e-11;3!CL:0000842;3.28e-11;3!CL:0000875;6.89e-11;3!CL:0002396;6.89e-11;3!CL:0000784;1.53e-10;3!CL:0000988;6.54e-09;177!CL:0000219;6.79e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.13e-147,42;CL:0002057,2.13e-147,42;CL:0000473,3.85e-140,48;CL:0000234,3.85e-140,48;CL:0002194,3.05e-115,59;CL:0000576,3.05e-115,59;CL:0000040,3.05e-115,59;CL:0000559,3.05e-115,59;CL:0002009,3.38e-111,61;CL:0000766,3.77e-107,72;CL:0000839,3.85e-102,66;CL:0000557,1.73e-100,67;CL:0000763,2.67e-68,108;CL:0000049,2.67e-68,108;CL:0000738,8.62e-68,136;CL:0002087,5.68e-66,115;CL:0002031,1.63e-54,120;CL:0000037,6.70e-53,168;CL:0000988,1.13e-49,177;CL:0002032,1.63e-44,161;CL:0000837,1.63e-44,161;CL:0002393,2.68e-31,9;CL:0002397,2.68e-31,9;CL:0000134,2.13e-19,354;CL:0002320,8.30e-19,361;CL:0000219,1.01e-16,386;CL:0000034,4.11e-15,441;CL:0000048,4.77e-15,427;CL:0000723,1.10e-14,433;CL:0000767,3.45e-12,3;CL:0000226,3.10e-11,3;CL:0000842,3.10e-11,3;CL:0000875,6.77e-11,3;CL:0002396,6.77e-11,3;CL:0000784,1.46e-10,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.05e-104;42!CL:0000049;2.26e-20;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.33e-62!80;UBERON:0001474!1.34e-59!86;UBERON:0002390!7.58e-53!102;UBERON:0003061!7.58e-53!102;UBERON:0004765!1.25e-48!101;UBERON:0001434!1.25e-48!101;UBERON:0002193!8.31e-47!112;UBERON:0002405!2.88e-39!115;UBERON:0002204!1.99e-27!167;UBERON:0003081!4.18e-22!216;UBERON:0002384!4.23e-18!375 | |ontology_enrichment_uberon=UBERON:0002371!1.33e-62!80;UBERON:0001474!1.34e-59!86;UBERON:0002390!7.58e-53!102;UBERON:0003061!7.58e-53!102;UBERON:0004765!1.25e-48!101;UBERON:0001434!1.25e-48!101;UBERON:0002193!8.31e-47!112;UBERON:0002405!2.88e-39!115;UBERON:0002204!1.99e-27!167;UBERON:0003081!4.18e-22!216;UBERON:0002384!4.23e-18!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.49e-87,76;UBERON:0001474,1.74e-80,82;UBERON:0002390,8.71e-76,98;UBERON:0003061,8.71e-76,98;UBERON:0004765,1.64e-72,90;UBERON:0002405,7.15e-70,93;UBERON:0002193,7.18e-68,108;UBERON:0001434,2.55e-64,100;UBERON:0002204,1.43e-34,167;UBERON:0003081,2.45e-31,203;UBERON:0002384,5.32e-18,371;UBERON:0000926,1.89e-16,315;UBERON:0004120,1.89e-16,315;UBERON:0006603,1.89e-16,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,20.454942396143,16.8884935162774,15.7912445782398,0,0,0,0,0,0,23.2678071583389,21.257711431835,18.4459240108474,0,0,0,2.90796477559129,2.26725566213286,4.12392904019288,8.36744532860465,7.81218987241469,11.4591357231188,16.6861587546847,9.47794614157672,25.7765630578558,24.1321976515633,21.9464792418501,23.0225027210381,7.9061782607894,6.82265375144614,11.2361742222542,31.526640914203,37.548696167903,29.4095077867559,4.28806690242731,5.18605509816243,3.40979800426155,29.0209238628584,15.3194010666608,17.4390229718761,9.79869794501299,11.4726242052444,19.1126183340503,20.5835830895345,21.7283805232663,28.1651524822387,5.28138215779854,6.80333759888139,7.12839394728478,3.48218756554135,2.4028302854641,2.25015821375912,3.13514018115373,1.59133341759272,3.47061892152804,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0.382273228125229,0,3.36305137788922,0,0,0,0.205601498999509,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0.390178042679635,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,1.90792499444274,1.14398982156026,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0.985153801009636,0.215627574859517,1.02674429023799,0,1.30139853857622,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,1.6541442089831,9.05999643438191,5.22965033236877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0.890894042497916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,20.454942396143,16.8884935162774,15.7912445782398,0,0,0,0,0,0,23.2678071583389,21.257711431835,18.4459240108474,0,0,0,2.90796477559129,2.26725566213286,4.12392904019288,8.36744532860465,7.81218987241469,11.4591357231188,16.6861587546847,9.47794614157672,25.7765630578558,24.1321976515633,21.9464792418501,23.0225027210381,7.9061782607894,6.82265375144614,11.2361742222542,31.526640914203,37.548696167903,29.4095077867559,4.28806690242731,5.18605509816243,3.40979800426155,29.0209238628584,15.3194010666608,17.4390229718761,9.79869794501299,11.4726242052444,19.1126183340503,20.5835830895345,21.7283805232663,28.1651524822387,5.28138215779854,6.80333759888139,7.12839394728478,3.48218756554135,2.4028302854641,2.25015821375912,3.13514018115373,1.59133341759272,3.47061892152804,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0.382273228125229,0,3.36305137788922,0,0,0,0.205601498999509,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0.390178042679635,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,1.90792499444274,1.14398982156026,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0.985153801009636,0.215627574859517,1.02674429023799,0,1.30139853857622,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,1.6541442089831,9.05999643438191,5.22965033236877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0.890894042497916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:106006943..106006961,+ | |short_description=p@chr10:106006943..106006961,+ | ||
}} | }} |
Latest revision as of 10:07, 23 July 2015
Short description: | p@chr10:106006943..106006961, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:106006943..106006961, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.49e-87 | 76 |
bone element | 1.74e-80 | 82 |
hematopoietic system | 8.71e-76 | 98 |
blood island | 8.71e-76 | 98 |
skeletal element | 1.64e-72 | 90 |
immune system | 7.15e-70 | 93 |
hemolymphoid system | 7.18e-68 | 108 |
skeletal system | 2.55e-64 | 100 |
musculoskeletal system | 1.43e-34 | 167 |
lateral plate mesoderm | 2.45e-31 | 203 |
connective tissue | 5.32e-18 | 371 |
mesoderm | 1.89e-16 | 315 |
mesoderm-derived structure | 1.89e-16 | 315 |
presumptive mesoderm | 1.89e-16 | 315 |