FFCP PHASE1:Hg19::chr10:116561109..116561139,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:116561109..116561139,- | |||
|coexpression_cluster_id=C103 | |coexpression_cluster_id=C103 | ||
|description=CAGE_peak_at_chr10:116561109..116561139,- | |description=CAGE_peak_at_chr10:116561109..116561139,- | ||
|id=chr10:116561109..116561139,- | |id=chr10:116561109..116561139,- | ||
|ontology_enrichment_celltype=CL:0000084!1.75e-38!25;CL:0000827!1.75e-38!25;CL:0000791!3.27e-32!18;CL:0000789!3.27e-32!18;CL:0002420!3.27e-32!18;CL:0002419!3.27e-32!18;CL:0000790!3.27e-32!18;CL:0000838!9.62e-26!52;CL:0000542!4.26e-25!53;CL:0000051!4.26e-25!53;CL:0000625!1.00e-21!11;CL:0000037!1.61e-21!172;CL:0000566!1.61e-21!172;CL:0000988!1.52e-19!182;CL:0000738!2.84e-19!140;CL:0002087!1.78e-17!119;CL:0002032!2.35e-17!165;CL:0000837!2.35e-17!165;CL:0000624!2.47e-14!6;CL:0002031!3.37e-13!124;CL:0000898!5.52e-08!3;CL:0000842!3.51e-07!3;CL:0000623!3.59e-07!3;CL:0000825!3.59e-07!3 | |ontology_enrichment_celltype=CL:0000084!1.75e-38!25;CL:0000827!1.75e-38!25;CL:0000791!3.27e-32!18;CL:0000789!3.27e-32!18;CL:0002420!3.27e-32!18;CL:0002419!3.27e-32!18;CL:0000790!3.27e-32!18;CL:0000838!9.62e-26!52;CL:0000542!4.26e-25!53;CL:0000051!4.26e-25!53;CL:0000625!1.00e-21!11;CL:0000037!1.61e-21!172;CL:0000566!1.61e-21!172;CL:0000988!1.52e-19!182;CL:0000738!2.84e-19!140;CL:0002087!1.78e-17!119;CL:0002032!2.35e-17!165;CL:0000837!2.35e-17!165;CL:0000624!2.47e-14!6;CL:0002031!3.37e-13!124;CL:0000898!5.52e-08!3;CL:0000842!3.51e-07!3;CL:0000623!3.59e-07!3;CL:0000825!3.59e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.78e-42;25!CL:0000791;1.16e-34;18!CL:0000789;1.16e-34;18!CL:0002419;1.16e-34;18!CL:0000624;1.60e-24;6!CL:0000625;2.20e-16;11!CL:0000898;4.50e-13;3!CL:0000542;9.31e-13;53!CL:0000815;3.80e-09;2!CL:0000792;3.80e-09;2!CL:0002677;3.80e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.61e-42,25;CL:0000827,1.61e-42,25;CL:0000791,1.07e-34,18;CL:0000789,1.07e-34,18;CL:0002420,1.07e-34,18;CL:0002419,1.07e-34,18;CL:0000790,1.07e-34,18;CL:0000838,8.74e-26,52;CL:0000542,3.32e-25,53;CL:0000051,3.32e-25,53;CL:0000624,1.45e-24,6;CL:0000625,2.18e-16,11;CL:0000898,3.98e-13,3;CL:0002087,3.29e-11,115;CL:0000037,1.07e-10,168;CL:0000988,7.62e-10,177;CL:0000738,8.25e-10,136;CL:0000815,3.37e-09,2;CL:0000792,3.37e-09,2;CL:0002677,3.37e-09,2;CL:0002031,2.16e-08,120;CL:0002032,1.61e-07,161;CL:0000837,1.61e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;1.16e-34;18!CL:0000051;9.31e-13;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.55e-12!15;UBERON:0000179!1.55e-12!15;UBERON:0000463!1.55e-12!15;UBERON:0004177!1.36e-07!7;UBERON:0002193!4.69e-07!112;UBERON:0002390!8.18e-07!102;UBERON:0003061!8.18e-07!102 | |ontology_enrichment_uberon=UBERON:0000178!1.55e-12!15;UBERON:0000179!1.55e-12!15;UBERON:0000463!1.55e-12!15;UBERON:0004177!1.36e-07!7;UBERON:0002193!4.69e-07!112;UBERON:0002390!8.18e-07!102;UBERON:0003061!8.18e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0002390;3.13e-09;32!UBERON:0002370;3.58e-09;2!UBERON:0005058;3.58e-09;2!UBERON:0009113;3.58e-09;2!UBERON:0000178;1.22e-08;15!UBERON:0000179;1.22e-08;15!UBERON:0000463;1.22e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.49e-10,4;UBERON:0005058,6.49e-10,4;UBERON:0009113,6.49e-10,4;UBERON:0003295,6.49e-10,4;UBERON:0005562,6.49e-10,4;UBERON:0000178,1.19e-08,15;UBERON:0000179,1.19e-08,15;UBERON:0000463,1.19e-08,15;UBERON:0003351,9.78e-07,6 | |||
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| ||
|short_description=p@chr10:116561109..116561139,- | |short_description=p@chr10:116561109..116561139,- | ||
}} | }} |
Latest revision as of 10:42, 23 July 2015
Short description: | p@chr10:116561109..116561139, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:116561109..116561139, - |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.61e-42 | 25 |
pro-T cell | 1.61e-42 | 25 |
mature alpha-beta T cell | 1.07e-34 | 18 |
alpha-beta T cell | 1.07e-34 | 18 |
immature T cell | 1.07e-34 | 18 |
mature T cell | 1.07e-34 | 18 |
immature alpha-beta T cell | 1.07e-34 | 18 |
lymphoid lineage restricted progenitor cell | 8.74e-26 | 52 |
lymphocyte | 3.32e-25 | 53 |
common lymphoid progenitor | 3.32e-25 | 53 |
CD4-positive, alpha-beta T cell | 1.45e-24 | 6 |
CD8-positive, alpha-beta T cell | 2.18e-16 | 11 |
naive T cell | 3.98e-13 | 3 |
nongranular leukocyte | 3.29e-11 | 115 |
hematopoietic stem cell | 1.07e-10 | 168 |
hematopoietic cell | 7.62e-10 | 177 |
leukocyte | 8.25e-10 | 136 |
regulatory T cell | 3.37e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.37e-09 | 2 |
naive regulatory T cell | 3.37e-09 | 2 |
hematopoietic lineage restricted progenitor cell | 2.16e-08 | 120 |
hematopoietic oligopotent progenitor cell | 1.61e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.61e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
thymus | 6.49e-10 | 4 |
hemolymphoid system gland | 6.49e-10 | 4 |
thymic region | 6.49e-10 | 4 |
pharyngeal gland | 6.49e-10 | 4 |
thymus primordium | 6.49e-10 | 4 |
blood | 1.19e-08 | 15 |
haemolymphatic fluid | 1.19e-08 | 15 |
organism substance | 1.19e-08 | 15 |
pharyngeal epithelium | 9.78e-07 | 6 |