FFCP PHASE1:Hg19::chr10:123305695..123305700,-: Difference between revisions
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|id=chr10:123305695..123305700,-
|short_description=p@chr10:123305695..123305700,-
|description=CAGE_peak_at_chr10:123305695..123305700,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:123305695..123305700,- | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_at_chr10:123305695..123305700,- | |||
|id=chr10:123305695..123305700,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002178;2.62e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.62e-23,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.66e-66;1!UBERON:0003056;4.09e-23;3 | |||
|ontology_enrichment_disease=DOID:1749!3.96e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3493;3.61e-34;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.61e-34,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.29e-30!57;UBERON:0005068!4.29e-30!57;UBERON:0006241!4.29e-30!57;UBERON:0007135!4.29e-30!57;UBERON:0003075!3.29e-28!86;UBERON:0007284!3.29e-28!86;UBERON:0002346!6.64e-28!90;UBERON:0007023!3.36e-27!115;UBERON:0001017!4.86e-25!82;UBERON:0005743!6.10e-25!86;UBERON:0002616!1.17e-24!59;UBERON:0000073!2.11e-24!94;UBERON:0001016!2.11e-24!94;UBERON:0000955!2.87e-24!69;UBERON:0006238!2.87e-24!69;UBERON:0002780!2.51e-22!41;UBERON:0001890!2.51e-22!41;UBERON:0006240!2.51e-22!41;UBERON:0000153!4.57e-22!129;UBERON:0007811!4.57e-22!129;UBERON:0003080!1.24e-21!42;UBERON:0000033!3.32e-21!123;UBERON:0000924!1.16e-20!173;UBERON:0006601!1.16e-20!173;UBERON:0004121!1.63e-20!169;UBERON:0002020!5.36e-19!34;UBERON:0003528!5.36e-19!34;UBERON:0001893!1.26e-18!34;UBERON:0003056!2.59e-18!61;UBERON:0002791!1.93e-17!33;UBERON:0001869!4.96e-16!32;UBERON:0000956!2.06e-11!25;UBERON:0000203!2.06e-11!25;UBERON:0002308!7.77e-10!9;UBERON:0000125!7.77e-10!9;UBERON:0002619!1.25e-09!22;UBERON:0003076!1.42e-09!15;UBERON:0003057!1.42e-09!15;UBERON:0001950!4.18e-09!20;UBERON:0004732!6.02e-09!13;UBERON:0002298!1.13e-08!8;UBERON:0000200!5.08e-08!6;UBERON:0000025!1.13e-07!194;UBERON:0000477!1.41e-07!286;UBERON:0004111!1.84e-07!241;UBERON:0000062!1.93e-07!511;UBERON:0000064!2.05e-07!219;UBERON:0004733!2.29e-07!12;UBERON:0002028!2.29e-07!12;UBERON:0007277!2.29e-07!12;UBERON:0000988!2.81e-07!3;UBERON:0003343!3.33e-07!4;UBERON:0004785!3.33e-07!4;UBERON:0006331!5.52e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;4.66e-66;1!UBERON:0001785;4.66e-66;1!UBERON:0002464;4.66e-66;1!UBERON:0004904;4.66e-66;1!UBERON:0001021;4.66e-66;1!UBERON:0002702;5.04e-34;2!UBERON:0003714;7.05e-34;2!UBERON:0005162;7.05e-34;2!UBERON:0000122;7.05e-34;2!UBERON:0001870;3.27e-23;3!UBERON:0000945;1.40e-14;5!UBERON:0010039;1.40e-14;5!UBERON:0000200;2.45e-12;6!UBERON:0000010;1.21e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.66e-66,1;UBERON:0001785,4.66e-66,1;UBERON:0002464,4.66e-66,1;UBERON:0004904,4.66e-66,1;UBERON:0001021,4.66e-66,1;UBERON:0003902,4.66e-66,1;UBERON:0005425,4.66e-66,1;UBERON:0002702,5.04e-34,2;UBERON:0003714,7.05e-34,2;UBERON:0005162,7.05e-34,2;UBERON:0000122,7.05e-34,2;UBERON:0001870,3.27e-23,3;UBERON:0001781,1.03e-17,4;UBERON:0000200,2.45e-12,6;UBERON:0000966,2.74e-12,6;UBERON:0005388,2.74e-12,6;UBERON:0001802,2.74e-12,6;UBERON:0000945,1.24e-09,8;UBERON:0010039,1.24e-09,8;UBERON:0000010,1.21e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0.227586896570999,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,0.153900517007594,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0.123563938946503,0,0.337005664903385,0,0.468528891450678,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.698906672968121,0,0,0,0,0,0.176512253383001,0,0,0,0.253243183823515,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,0.321506296930038,0,0,0,0,0.182248669974074,0,0.236417121897595,0.209818352539992,0,0.179287339332845,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.52893040697076,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,2.65820453990096,0,0.250381861413,0,0.110929051536852,0.372578417648301,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0.205116364240755,0,0,0.161475645631851,1.42769420259154,0.0981477185010256,0.11796972334774,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0.523813388962845,0,0,0.135075169236789,0,0,0.253663240775627,0.546974809018219,0,0,0,0.255524855279191,0,0,0,0.227662191351298,0,0,0,0.271878931907327,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.285906176706625,0.316027223465453,0,0,0,0.207216164163037,0,0,0.430227358820278,0,0,0,0,0,0,0,4.1223098118402,0,0.647428837187895,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.785233868459781,0.297046400327086,0,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0.315543124386369,0.0679914901909147,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0.275684698604535,0,0,0,0.829169439458779,0.413731983447581,0.213233981900981,0.476128862927481,0,0,0.112131862580613,0.25458863311266,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.733448665097199,0.406896178315738,0,0,0 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| ||
|short_description=p@chr10:123305695..123305700,- | |||
}} | }} |
Latest revision as of 11:06, 23 July 2015
Short description: | p@chr10:123305695..123305700, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:123305695..123305700, - |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.62e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.66e-66 | 1 |
cranial nerve | 4.66e-66 | 1 |
nerve trunk | 4.66e-66 | 1 |
nerve connecting eye with brain | 4.66e-66 | 1 |
nerve | 4.66e-66 | 1 |
retinal neural layer | 4.66e-66 | 1 |
presumptive neural retina | 4.66e-66 | 1 |
middle frontal gyrus | 5.04e-34 | 2 |
neural tissue | 7.05e-34 | 2 |
multi cell component structure | 7.05e-34 | 2 |
neuron projection bundle | 7.05e-34 | 2 |
frontal cortex | 3.27e-23 | 3 |
layer of retina | 1.03e-17 | 4 |
gyrus | 2.45e-12 | 6 |
retina | 2.74e-12 | 6 |
photoreceptor array | 2.74e-12 | 6 |
posterior segment of eyeball | 2.74e-12 | 6 |
stomach | 1.24e-09 | 8 |
food storage organ | 1.24e-09 | 8 |
peripheral nervous system | 1.21e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.61e-34 | 2 |