FFCP PHASE1:Hg19::chr10:17275853..17275926,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:17275853..17275926,- | |||
|coexpression_cluster_id=C490 | |||
|description=CAGE_peak_at_chr10:17275853..17275926,- | |||
|id=chr10:17275853..17275926,- | |||
|ontology_enrichment_celltype=CL:0000055!5.00e-31!180;CL:0002371!1.64e-25!591;CL:0000144!9.04e-24!625;CL:0000048!1.26e-18!430;CL:0000222!3.11e-18!119;CL:0000723!5.10e-17!436;CL:0000057!2.96e-16!75;CL:0000034!4.14e-16!444;CL:0000548!3.90e-15!679;CL:0000004!3.90e-15!679;CL:0000255!3.90e-15!679;CL:0000012!4.00e-15!682;CL:0000680!3.02e-13!57;CL:0000056!3.02e-13!57;CL:0000355!3.02e-13!57;CL:0000183!3.14e-13!59;CL:0000187!9.19e-13!54;CL:0000393!6.01e-12!60;CL:0000211!6.01e-12!60;CL:0000003!6.84e-11!722;CL:0000192!1.43e-10!42;CL:0000514!1.43e-10!42;CL:0000359!2.31e-09!32;CL:0002320!6.38e-09!365;CL:0002620!1.77e-08!23;CL:0000219!9.20e-08!390;CL:0000134!1.65e-07!358;CL:0000220!7.29e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.79e-09;32!CL:0002620;3.06e-09;23!CL:0000192;8.12e-09;43!CL:0000187;4.25e-08;55!CL:0000057;1.67e-07;73!CL:0000393;8.19e-07;61!CL:0000211;8.19e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.55e-19,121;CL:0000048,5.76e-19,427;CL:0000057,1.97e-18,76;CL:0000723,1.92e-17,433;CL:0000034,3.49e-16,441;CL:0000680,1.19e-14,58;CL:0000056,1.19e-14,58;CL:0000355,1.19e-14,58;CL:0000187,4.03e-14,55;CL:0000393,5.97e-13,61;CL:0000211,5.97e-13,61;CL:0000192,1.62e-11,43;CL:0000514,1.62e-11,43;CL:0000359,9.06e-10,32;CL:0002620,2.30e-09,23;CL:0002320,1.13e-08,361;CL:0002321,3.69e-08,250;CL:0000219,1.78e-07,386;CL:0000134,3.20e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000514;8.12e-09;43!CL:0000355;1.03e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.82e-17!83;UBERON:0002329!5.82e-17!83;UBERON:0003077!5.82e-17!83;UBERON:0003059!5.82e-17!83;UBERON:0007282!5.82e-17!83;UBERON:0009618!5.82e-17!83;UBERON:0007285!5.82e-17!83;UBERON:0002049!1.40e-16!79;UBERON:0007798!1.40e-16!79;UBERON:0002204!4.71e-16!167;UBERON:0004535!1.18e-15!110;UBERON:0004290!1.78e-15!70;UBERON:0001009!7.50e-15!113;UBERON:0003081!8.30e-15!216;UBERON:0000055!5.15e-14!69;UBERON:0001981!1.99e-13!60;UBERON:0007500!1.99e-13!60;UBERON:0004537!1.99e-13!60;UBERON:0006965!1.99e-13!60;UBERON:0004872!4.47e-13!84;UBERON:0000486!3.31e-12!82;UBERON:0001637!4.88e-12!42;UBERON:0003509!4.88e-12!42;UBERON:0004572!4.88e-12!42;UBERON:0001134!6.13e-12!61;UBERON:0002036!6.13e-12!61;UBERON:0003082!6.13e-12!61;UBERON:0000926!1.04e-11!448;UBERON:0004120!1.04e-11!448;UBERON:0006603!1.04e-11!448;UBERON:0002385!2.37e-11!63;UBERON:0001015!2.37e-11!63;UBERON:0000383!2.37e-11!63;UBERON:0004573!5.52e-10!33;UBERON:0004571!5.52e-10!33;UBERON:0002384!5.41e-09!375;UBERON:0005256!9.34e-09!143;UBERON:0003914!4.14e-08!118;UBERON:0000947!5.72e-07!21;UBERON:0010191!5.72e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.87e-10;33!UBERON:0004571;4.87e-10;33!UBERON:0001637;8.99e-10;42!UBERON:0003509;8.99e-10;42!UBERON:0004572;8.99e-10;42!UBERON:0007500;1.01e-08;56!UBERON:0001981;1.01e-08;56!UBERON:0004537;1.01e-08;56!UBERON:0002049;1.05e-07;75!UBERON:0007798;1.05e-07;75!UBERON:0000947;1.23e-07;21!UBERON:0010191;1.23e-07;21!UBERON:0003914;1.93e-07;74!UBERON:0000055;4.50e-07;65!UBERON:0002384;6.09e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.26e-20,315;UBERON:0004120,1.26e-20,315;UBERON:0006603,1.26e-20,315;UBERON:0007503,6.05e-18,78;UBERON:0002049,7.29e-18,78;UBERON:0007798,7.29e-18,78;UBERON:0002329,3.42e-17,71;UBERON:0003059,3.42e-17,71;UBERON:0007282,3.42e-17,71;UBERON:0004290,3.42e-17,71;UBERON:0009618,3.42e-17,71;UBERON:0007524,4.40e-17,73;UBERON:0003077,1.48e-16,72;UBERON:0007285,1.48e-16,72;UBERON:0002204,1.49e-16,167;UBERON:0004535,1.78e-15,109;UBERON:0000055,4.62e-15,68;UBERON:0001009,1.47e-14,112;UBERON:0007500,3.15e-14,59;UBERON:0001981,3.15e-14,59;UBERON:0004537,3.15e-14,59;UBERON:0006965,3.15e-14,59;UBERON:0000486,1.62e-13,83;UBERON:0004872,2.37e-13,83;UBERON:0001134,2.65e-13,62;UBERON:0002036,2.65e-13,62;UBERON:0003082,2.65e-13,62;UBERON:0001637,1.09e-12,42;UBERON:0003509,1.09e-12,42;UBERON:0004572,1.09e-12,42;UBERON:0002385,1.39e-12,64;UBERON:0001015,1.39e-12,64;UBERON:0000383,1.39e-12,64;UBERON:0003081,5.80e-12,203;UBERON:0000490,4.12e-11,148;UBERON:0004573,9.12e-11,33;UBERON:0004571,9.12e-11,33;UBERON:0003914,8.65e-10,117;UBERON:0002384,5.60e-09,371;UBERON:0003104,5.74e-09,160;UBERON:0009142,5.74e-09,160;UBERON:0005256,1.43e-08,122;UBERON:0002199,1.22e-07,46;UBERON:0002416,1.22e-07,46;UBERON:0000947,1.79e-07,21;UBERON:0010191,1.79e-07,21 | |||
|phase1_expression=3.27021082687002,2.5692062866918,2.11431606143957,13.009528785907,5.81049422755474,7.85104671690332,2.53299878168311,6.31719873426831,5.22371256399677,1.22866968250754,1.39560233594486,1.09220686065086,3.69273769519835,21.164046356168,24.8548031795937,12.7741777825837,12.0538905604795,8.03341099426111,10.7345215733912,5.41732655537867,10.4040352534569,19.1207380101634,14.3117993565528,13.6874425072884,11.0477522843426,0.152826811495903,0.0821005894499457,0.157421562627358,0,0.383829398097213,0.928896739896456,0,0.90361775633475,0,0,0,1.46800219667424,4.43196326825502,3.20871115952227,8.89744569934992,1.11957737119962,0.647787332037959,0.257575567634187,2.90796477559129,2.26725566213286,1.21292030593908,5.11343881192506,2.05583944010913,2.47765096716083,7.76769459269806,2.0492856522328,2.83778675866302,9.99762474136194,1.29096936716765,6.77132432971709,3.20011977222428,3.82068610080984,2.9214052977861,9.79468455586888,0.962787081228281,5.11469700639233,7.25672860410775,2.59302754908121,4.26224750532694,15.381089647315,1.70215567407342,8.09668923694247,4.27122730936464,1.0429658368404,2.38907729175628,6.65939452896706,2.20966581592539,6.32924774881769,0.422510572623884,1.06302149982522,1.46761051855863,1.57260083605093,0.901061357049038,0.32145117339416,0.855038231223746,1.19350006319454,0.91332076882317,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0.587237189370939,0.764546456250458,1.32171328579026,0.560508562981536,1.05353633910031,0.786839080455332,2.35806457649499,1.02800749499755,0.334372990781356,0,0,3.89653456815823,0.111410456885174,0.589211814949674,1.10766947291811,0.270803863765016,1.92136979588513,1.1705341280389,2.79544437826249,3.59255023121603,0,0.14828656316206,0,1.04535523804977,1.13309342697566,0.383220493601921,0.68725489096526,0,0.318565414324097,0.651083453856419,0.950452044448374,0.301150238155546,0.255973222308837,0,0.473554504088034,0,0.604820229674197,2.13952156626806,1.01377082717959,0,11.4019146149618,3.32442660793179,14.0961269429981,2.00535164254356,13.4707262633566,0,9.24606253575008,7.37371573879729,13.9689520401415,9.48615685485761,0.72038491523742,0,0.370784442784429,4.86821090482025,4.35324343248168,7.84451967061304,0.953962497221368,0.571994910780128,0.371457501329565,1.19257444420023,3.4409383804245,6.2485290289367,3.39184765154406,11.3264847776675,13.2056660131232,2.08994966536811,6.46041897923322,1.77883131343355,1.67360306382335,10.876391561947,1.52054421143703,17.0843440283719,4.04429388380456,22.6839745406893,1.60739510911344,3.36794058939255,3.60356737546631,1.53316637465883,3.79706263827252,6.59526278149466,0,0,0.436094052142534,8.44852317882041,6.07826455989983,4.36950296683622,14.9155042789383,6.02936249737207,3.92474320099615,1.06748995729705,11.1000396787722,0,8.48677234039035,6.70193802765181,1.51357427644931,3.45705554687999,1.87457145467037,8.74048215124897,3.99330275081114,27.1996598604278,15.971091815552,17.9678968248626,14.4664330903316,5.10385428137233,26.6550468566536,6.61284999524899,4.75201142912821,12.1160795346493,0,4.31170885089743,12.2885363186468,6.88151859295803,0.554128230968366,6.58466431321257,23.2930724807255,6.15976041517047,7.94025282120147,18.6565221116416,6.19316427573846,6.14602513362729,24.0072876867522,2.26715564324566,18.034837803194,4.65292140828975,7.42615861861571,4.38466523225394,22.7190396819703,5.52299391853796,4.68773564774555,12.0703261455649,2.82105875037393,8.64759020783487,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0.464775771478074,0.932949495138334,1.00928340350251,0,1.56449532329816,29.5890831568727,12.4321429217232,13.4666699129274,50.531563716871,0.946454400318751,0.505754070234305,0.964044119533928,1.7647035637183,0.653638332277218,0.949082476444386,1.75280700608214,1.17732879075208,0.769494313892781,4.42893272774789,8.41450642820675,1.6462960453256,7.3504355692771,0,0,0,0,0,4.28919525746314,0.658501712451753,0,0.100528972411631,0.0925884451585296,1.95484983186195,8.31947828223663,7.21656710126366,13.9116485970092,1.76113041353732,6.35212370148725,8.33373922637899,7.61016608938393,0,0,2.21595305478658,2.34004265139238,5.35072184239422,0,1.17587489739202,0.425325291727159,4.03013352162817,1.16253575405585,4.60059214998253,0,0.968532774145487,0.621984346622316,0.720599767084807,0.6312121671319,2.15892840593375,0.381988425558278,0,1.71072446022705,3.80461723002297,8.40960561962969,3.14409075893636,0.336393253036082,0.43596006883328,2.4935017179123,2.06834745212444,0,14.370146793452,3.45719551560332,7.28052058379563,3.34369586540785,8.5109479213967,7.72624319146688,3.0025378668211,1.08524321078289,5.76268235746538,8.46914079163711,2.84313558994037,11.087326221068,1.80863626235752,0.871533458600294,1.79951384127703,4.86495122564762,1.00451418286425,6.32501818449095,3.35474797688216,3.44585807502342,1.42636905040718,3.90909528002464,9.04095819221687,1.79060963239896,1.68127715990291,1.77327684181734,1.72502059887614,1.15508732651774,0.76228387266739,0,6.18631050222156,1.84267891867784,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| |||
|short_description=p@chr10:17275853..17275926,- | |||
}} |
Latest revision as of 12:16, 23 July 2015
Short description: | p@chr10:17275853..17275926, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17275853..17275926, - |
Coexpression cluster: | C490_Hair_Fibroblast_Synoviocyte_Olfactory_Preadipocyte_Endothelial_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.55e-19 | 121 |
multi fate stem cell | 5.76e-19 | 427 |
fibroblast | 1.97e-18 | 76 |
somatic stem cell | 1.92e-17 | 433 |
stem cell | 3.49e-16 | 441 |
muscle precursor cell | 1.19e-14 | 58 |
myoblast | 1.19e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.19e-14 | 58 |
muscle cell | 4.03e-14 | 55 |
electrically responsive cell | 5.97e-13 | 61 |
electrically active cell | 5.97e-13 | 61 |
smooth muscle cell | 1.62e-11 | 43 |
smooth muscle myoblast | 1.62e-11 | 43 |
vascular associated smooth muscle cell | 9.06e-10 | 32 |
skin fibroblast | 2.30e-09 | 23 |
connective tissue cell | 1.13e-08 | 361 |
embryonic cell | 3.69e-08 | 250 |
motile cell | 1.78e-07 | 386 |
mesenchymal cell | 3.20e-07 | 354 |