FFCP PHASE1:Hg19::chr10:17278354..17278389,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:17278354..17278389,-
|short_description=p@chr10:17278354..17278389,-
|description=CAGE_peak_at_chr10:17278354..17278389,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:17278354..17278389,- | |||
|coexpression_cluster_id=C490 | |||
|description=CAGE_peak_at_chr10:17278354..17278389,- | |||
|id=chr10:17278354..17278389,- | |||
|ontology_enrichment_celltype=CL:0000055!5.15e-30!180;CL:0002371!7.02e-26!591;CL:0000144!1.11e-22!625;CL:0000048!6.35e-20!430;CL:0000723!9.66e-19!436;CL:0000034!5.71e-18!444;CL:0000057!6.98e-16!75;CL:0000012!3.09e-15!682;CL:0000548!3.38e-15!679;CL:0000004!3.38e-15!679;CL:0000255!3.38e-15!679;CL:0000183!6.13e-13!59;CL:0000680!1.01e-12!57;CL:0000056!1.01e-12!57;CL:0000355!1.01e-12!57;CL:0000222!8.27e-12!119;CL:0000187!1.08e-11!54;CL:0000393!2.15e-11!60;CL:0000211!2.15e-11!60;CL:0000003!1.71e-10!722;CL:0002320!4.62e-10!365;CL:0000192!5.24e-10!42;CL:0000514!5.24e-10!42;CL:0002620!6.17e-10!23;CL:0000359!2.61e-09!32;CL:0000219!8.57e-09!390;CL:0000134!2.53e-08!358 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.35e-11;23!CL:0000359;7.20e-10;32!CL:0000192;8.93e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.47e-20,427;CL:0000723,1.78e-19,433;CL:0000034,4.33e-18,441;CL:0000057,3.78e-15,76;CL:0000680,6.88e-14,58;CL:0000056,6.88e-14,58;CL:0000355,6.88e-14,58;CL:0000187,1.51e-12,55;CL:0000393,1.57e-12,61;CL:0000211,1.57e-12,61;CL:0002620,5.52e-11,23;CL:0000359,1.49e-10,32;CL:0000222,1.64e-10,121;CL:0000192,1.71e-10,43;CL:0000514,1.71e-10,43;CL:0002320,4.41e-10,361;CL:0000219,4.66e-08,386;CL:0000134,4.86e-08,354 | |||
|ontology_enrichment_development_v019=CL:0000514;8.93e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.63e-16!167;UBERON:0000914!4.75e-15!83;UBERON:0002329!4.75e-15!83;UBERON:0003077!4.75e-15!83;UBERON:0003059!4.75e-15!83;UBERON:0007282!4.75e-15!83;UBERON:0009618!4.75e-15!83;UBERON:0007285!4.75e-15!83;UBERON:0004290!1.26e-14!70;UBERON:0002049!3.84e-14!79;UBERON:0007798!3.84e-14!79;UBERON:0003081!5.26e-14!216;UBERON:0001637!5.11e-13!42;UBERON:0003509!5.11e-13!42;UBERON:0004572!5.11e-13!42;UBERON:0000486!2.84e-12!82;UBERON:0000055!3.84e-12!69;UBERON:0004535!4.04e-12!110;UBERON:0001981!2.70e-11!60;UBERON:0007500!2.70e-11!60;UBERON:0004537!2.70e-11!60;UBERON:0006965!2.70e-11!60;UBERON:0001009!3.83e-11!113;UBERON:0001134!6.25e-11!61;UBERON:0002036!6.25e-11!61;UBERON:0003082!6.25e-11!61;UBERON:0004872!1.49e-10!84;UBERON:0002384!1.74e-10!375;UBERON:0002385!1.77e-10!63;UBERON:0001015!1.77e-10!63;UBERON:0000383!1.77e-10!63;UBERON:0004573!2.04e-10!33;UBERON:0004571!2.04e-10!33;UBERON:0000926!1.19e-08!448;UBERON:0004120!1.19e-08!448;UBERON:0006603!1.19e-08!448;UBERON:0000947!2.06e-08!21;UBERON:0010191!2.06e-08!21;UBERON:0002199!2.54e-08!45;UBERON:0002416!2.54e-08!45;UBERON:0002097!5.41e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.00e-10;33!UBERON:0004571;3.00e-10;33!UBERON:0001637;1.06e-09;42!UBERON:0003509;1.06e-09;42!UBERON:0004572;1.06e-09;42!UBERON:0000947;2.19e-08;21!UBERON:0010191;2.19e-08;21!UBERON:0007500;1.36e-07;56!UBERON:0001981;1.36e-07;56!UBERON:0004537;1.36e-07;56!UBERON:0002097;5.62e-07;41!UBERON:0002199;5.95e-07;46!UBERON:0002416;5.95e-07;46 | |||
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|phase1_expression=1.45342703416445,1.49870366723688,0.845726424575827,4.00293193412522,1.78784437770915,4.36169262050184,2.53299878168311,0.631719873426831,1.82829939739887,0.737201809504527,0,0.655324116390517,0.791300934685361,7.30221482464275,10.9361133990212,8.0679017574213,5.42425075221579,7.30310090387373,1.95173119516203,1.10808952269109,0.816002764977012,4.38836610069323,4.00730381983479,3.28498620174922,2.25976751270645,0,0.0821005894499457,0,0,0,0.619264493264304,0,0,0,0,0,0.293600439334847,1.66198622559563,1.20326668482085,0.868043482863407,0.223915474239924,0.32389366601898,0,1.01778767145695,0.755751887377619,0.485168122375632,0.929716147622738,1.23350366406548,1.54853185447552,1.1507695692886,0.512321413058201,2.60130452877444,2.75796544589295,0.645484683583826,4.06279459783025,1.12945403725563,0.272906150057846,0.449446968890169,2.75475503133812,0.320929027076094,0.639337125799041,0.989553900560148,0.398927315243264,0,2.61188314765726,0.56738522469114,1.86846674698672,1.50749199154046,1.0429658368404,0.868755378820466,3.63239701580021,0.368277635987565,1.58231193720442,0.422510572623884,0.425208599930087,1.25795187305026,0.22465726229299,0.300353785683013,0.16072558669708,0.285012743741249,0.39783335439818,0.365328307529268,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0.560508562981536,0.790152254325231,0,0.393010762749165,0,0,0,0,1.94826728407911,0,1.17842362989935,0,0,0.640456598628376,0.130059347559878,0.493313713811028,0.276350017785848,0,0.296573126324121,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0.150575119077773,0,1.24930726552346,0.236777252044017,0,0.201606743224732,0.267440195783507,0.144824403882799,0,5.36560687762909,1.53435074212236,4.69870898099936,0.50133791063589,4.05570253090306,0,2.91980922181582,2.83604451492204,3.99112915432615,2.98638271356629,0.130979075497713,0,0.370784442784429,1.29818957461873,2.26368658489047,2.39324328933957,0.953962497221368,0,0,0.39752481473341,0.860234595106124,2.42998351125316,1.69592382577203,3.77549492588915,2.20094433552054,0.626984899610432,1.8089173141853,0.71153252537342,0,4.43112248820062,1.52054421143703,3.41686880567437,4.41195696415042,4.0507097394088,0.625098097988558,1.34717623575702,0.450445921933289,1.53316637465883,0,0.916008719652036,0,0,0,0.993943903390637,3.03913227994991,2.78059279707759,5.44989579422746,1.41867352879343,0.560677600142307,5.33744978648525,4.68668341992604,0.622422070799533,3.63718814588158,1.9615428373615,0.756787138224657,0.576175924479999,0.468642863667593,2.80944069147288,0.570471821544449,5.67904986096844,5.87172493218824,5.34180716414834,6.88208952841018,1.02077085627447,4.79053837515895,1.96318984233954,1.18800285728205,3.21447008062124,0,2.87447256726495,5.21841953257605,0.750711119231785,0.277064115484183,0.877955241761676,4.90380473278431,1.95309476578576,4.19699077692078,6.45802688479903,2.13557388818567,2.33125091275518,8.10245959427886,1.8549455262919,7.9868567414145,2.60563598864226,4.05063197379039,2.04617710838517,9.34004964703224,2.39329736469978,1.2931684545505,1.77504796258307,1.91428986632517,1.3564847384839,0.57978255948989,0.818238361772504,0,0.121973706129595,0,0.348581828608555,0.310983165046111,0,0,1.56449532329816,16.724264393015,6.90674606762403,15.7885095530873,15.1594691150613,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,1.3725424823882,0.768251997860379,0,0.100528972411631,0,0.325808305310325,3.11980435583874,1.44331342025273,4.86907700895323,0.821860859650752,3.75352764178792,1.85194205030644,2.66355813128438,0,0,0.492434012174795,1.8720341211139,1.33768046059855,0,0,0,1.97028749946266,0.581267877027924,0,0,0.352193736052904,0.414656231081544,0.144119953416961,0.37872730027914,0.761974731506028,0,0,5.13217338068116,1.54241239054985,3.30377363628309,0.285826432630578,0.448524337381443,0,0.7333828582095,2.19761916788222,0,5.071816515336,2.12750493267896,3.12022310734098,0.514414748524284,1.41849132023278,2.1313774321288,1.28680194292333,3.25572963234866,1.64648067356154,5.86325131728723,0.355391948742546,7.12756685640086,1.80863626235752,0,0.499864955910285,1.2162378064119,1.00451418286425,6.32501818449095,1.91699884393266,1.14861935834114,0,2.17171960001369,3.6985738059069,1.61154866915906,0.224170287987055,0.394061520403854,0.215627574859517,0,0.508189248444927,0,3.86644406388848,1.34013012267479,3.18969375826582,0,0,0,2.57652132610194,7.00238729483548,6.23909554509392,12.2702808303176,19.9840467452821,10.2506569772058,2.6942525448324,1.50473049863859,0,10.3473071292505,1.99267679560631,1.10621501125022,3.47534457872331,1.56640925970192,1.71571711905428,0,1.07857100409308,0.213455115606889,0,0,1.20956117331872,1.48864684691266,1.53461973288062,1.12264037773229,0.384417447767103,0,0.804269605718038,1.48418066444991,2.46735510084249,3.01854933032316,2.38168752440047,1.55776328755086,10.4589340613963,0,0.200506470303285,0,0.918515585316854,1.45672934405374,2.622488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| ||
|short_description=p@chr10:17278354..17278389,- | |||
}} | }} |
Latest revision as of 12:18, 23 July 2015
Short description: | p@chr10:17278354..17278389, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17278354..17278389, - |
Coexpression cluster: | C490_Hair_Fibroblast_Synoviocyte_Olfactory_Preadipocyte_Endothelial_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.47e-20 | 427 |
somatic stem cell | 1.78e-19 | 433 |
stem cell | 4.33e-18 | 441 |
fibroblast | 3.78e-15 | 76 |
muscle precursor cell | 6.88e-14 | 58 |
myoblast | 6.88e-14 | 58 |
multi-potent skeletal muscle stem cell | 6.88e-14 | 58 |
muscle cell | 1.51e-12 | 55 |
electrically responsive cell | 1.57e-12 | 61 |
electrically active cell | 1.57e-12 | 61 |
skin fibroblast | 5.52e-11 | 23 |
vascular associated smooth muscle cell | 1.49e-10 | 32 |
mesodermal cell | 1.64e-10 | 121 |
smooth muscle cell | 1.71e-10 | 43 |
smooth muscle myoblast | 1.71e-10 | 43 |
connective tissue cell | 4.41e-10 | 361 |
motile cell | 4.66e-08 | 386 |
mesenchymal cell | 4.86e-08 | 354 |