FFCP PHASE1:Hg19::chr10:33545308..33545344,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:33545308..33545344,- | |||
|description=CAGE_peak_at_chr10:33545308..33545344,- | |||
|id=chr10:33545308..33545344,- | |||
|ontology_enrichment_celltype=CL:0000055!2.13e-18!180;CL:0000680!4.21e-15!57;CL:0000056!4.21e-15!57;CL:0000355!4.21e-15!57;CL:0000187!1.27e-13!54;CL:0000192!1.99e-13!42;CL:0000514!1.99e-13!42;CL:0000057!1.20e-12!75;CL:0000183!1.58e-12!59;CL:0000222!1.13e-11!119;CL:0000393!2.88e-11!60;CL:0000211!2.88e-11!60;CL:0000359!2.02e-10!32;CL:0000048!2.71e-07!430;CL:0002371!3.44e-07!591;CL:0000723!5.97e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.01e-08;32!CL:0000192;5.26e-08;43!CL:0000569;4.45e-07;4!CL:0000134;9.23e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.48e-11,427;CL:0000723,4.58e-11,433;CL:0000680,1.49e-10,58;CL:0000056,1.49e-10,58;CL:0000355,1.49e-10,58;CL:0000034,1.96e-10,441;CL:0000192,4.78e-10,43;CL:0000514,4.78e-10,43;CL:0000187,1.99e-08,55;CL:0000359,2.92e-08,32;CL:0000393,7.54e-08,61;CL:0000211,7.54e-08,61;CL:0000569,1.99e-07,4;CL:0000011,1.99e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;5.26e-08;43!CL:0000011;4.45e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!8.02e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.49e-09;14!DOID:0060072;8.01e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.41e-09,14;DOID:0060072,1.05e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.58e-17!83;UBERON:0002329!1.58e-17!83;UBERON:0003077!1.58e-17!83;UBERON:0003059!1.58e-17!83;UBERON:0007282!1.58e-17!83;UBERON:0009618!1.58e-17!83;UBERON:0007285!1.58e-17!83;UBERON:0004290!1.87e-16!70;UBERON:0001134!1.47e-15!61;UBERON:0002036!1.47e-15!61;UBERON:0003082!1.47e-15!61;UBERON:0002385!2.25e-15!63;UBERON:0001015!2.25e-15!63;UBERON:0000383!2.25e-15!63;UBERON:0000486!3.75e-15!82;UBERON:0005256!6.65e-13!143;UBERON:0001637!1.71e-11!42;UBERON:0003509!1.71e-11!42;UBERON:0004572!1.71e-11!42;UBERON:0002049!3.55e-11!79;UBERON:0007798!3.55e-11!79;UBERON:0000055!5.99e-11!69;UBERON:0004573!6.31e-10!33;UBERON:0004571!6.31e-10!33;UBERON:0000468!1.09e-09!659;UBERON:0004872!1.38e-09!84;UBERON:0001981!1.43e-09!60;UBERON:0007500!1.43e-09!60;UBERON:0004537!1.43e-09!60;UBERON:0006965!1.43e-09!60;UBERON:0000467!1.81e-09!625;UBERON:0000480!2.61e-09!626;UBERON:0002204!4.08e-09!167;UBERON:0002100!8.69e-09!216;UBERON:0003914!1.42e-08!118;UBERON:0001009!1.53e-08!113;UBERON:0000490!2.17e-08!138;UBERON:0000926!2.38e-08!448;UBERON:0004120!2.38e-08!448;UBERON:0006603!2.38e-08!448;UBERON:0004535!4.55e-08!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.25e-09;33!UBERON:0004571;1.25e-09;33!UBERON:0011135;2.29e-08;5!UBERON:0002216;2.29e-08;5!UBERON:0011134;2.29e-08;5!UBERON:0002209;2.29e-08;5!UBERON:0002213;2.29e-08;5!UBERON:0007844;2.29e-08;5!UBERON:0011138;2.29e-08;5!UBERON:0001130;2.29e-08;5!UBERON:0001066;2.29e-08;5!UBERON:0001468;2.29e-08;5!UBERON:0002118;5.56e-08;5!UBERON:0001637;2.02e-07;42!UBERON:0003509;2.02e-07;42!UBERON:0004572;2.02e-07;42!UBERON:0003134;5.45e-07;33!UBERON:0002385;6.62e-07;31!UBERON:0001015;6.62e-07;31!UBERON:0000383;6.62e-07;31!UBERON:0000992;9.37e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.23e-11,73;UBERON:0001134,1.23e-11,62;UBERON:0002036,1.23e-11,62;UBERON:0003082,1.23e-11,62;UBERON:0007503,2.52e-11,78;UBERON:0002329,2.77e-11,71;UBERON:0003059,2.77e-11,71;UBERON:0007282,2.77e-11,71;UBERON:0004290,2.77e-11,71;UBERON:0009618,2.77e-11,71;UBERON:0002385,4.84e-11,64;UBERON:0001015,4.84e-11,64;UBERON:0000383,4.84e-11,64;UBERON:0003077,5.12e-11,72;UBERON:0007285,5.12e-11,72;UBERON:0000926,1.27e-10,315;UBERON:0004120,1.27e-10,315;UBERON:0006603,1.27e-10,315;UBERON:0004573,1.40e-10,33;UBERON:0004571,1.40e-10,33;UBERON:0001637,1.72e-10,42;UBERON:0003509,1.72e-10,42;UBERON:0004572,1.72e-10,42;UBERON:0000486,2.24e-09,83;UBERON:0011135,2.52e-08,5;UBERON:0002216,2.52e-08,5;UBERON:0011134,2.52e-08,5;UBERON:0002209,2.52e-08,5;UBERON:0002213,2.52e-08,5;UBERON:0005856,2.52e-08,5;UBERON:0005866,2.52e-08,5;UBERON:0005863,2.52e-08,5;UBERON:0007844,2.52e-08,5;UBERON:0011138,2.52e-08,5;UBERON:0001130,2.52e-08,5;UBERON:0001066,2.52e-08,5;UBERON:0001468,2.52e-08,5;UBERON:0002204,2.71e-08,167;UBERON:0002118,5.56e-08,5;UBERON:0005256,1.02e-07,122;UBERON:0003104,2.75e-07,160;UBERON:0009142,2.75e-07,160;UBERON:0000055,2.95e-07,68;UBERON:0000992,6.27e-07,13 | |||
|phase1_expression=0.54503513781167,2.35510576280081,0.845726424575827,1.0007329835313,2.23480547213644,2.61701557230111,0,1.26343974685366,0.522371256399677,0,0,0,0,2.59909341216098,3.64537113300707,4.03395087871065,3.01347264011988,2.92124036154949,0.975865597581014,0.246242116153576,0.204000691244253,0.313454721478088,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0.726991193897824,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,0.512321413058201,0,0.344745680736619,0,0,0.564727018627814,0.272906150057846,0,0.918251677112708,0,0,0,0.398927315243264,0,0.580418477257168,0.56738522469114,0,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0,0,0,0.756278537312543,2.21729397462564,0.263504357079378,0.261958150995425,0,0,1.29818957461873,0.522389211897802,2.39324328933957,0.476981248610684,1.71598473234038,0.74291500265913,0,0,0.347140501607594,0.56530794192401,0.419499436209906,1.10047216776027,1.25396979922086,1.8089173141853,1.06729878806013,1.33888245105868,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0.535798369704479,0,0.563057402416611,0,0.949265659568129,0.732806975721629,0,0,0,0.993943903390637,1.39293562831038,0.794455084879313,3.72887606973458,1.41867352879343,0.560677600142307,1.06748995729705,0.49333509683432,0,0.942974704487816,0.490385709340376,0,0.576175924479999,0.234321431833797,0.624320153660641,0,0.597794722207204,0.23486899728753,0.485618833104395,0.702254033511242,0.61246251376468,0.982674538494144,0.413303124703062,1.18800285728205,0.494533858557114,0,0.718618141816238,0.505008341862199,1.00094815897571,0,0.438977620880838,1.83892677479412,0.150238058906597,0.453728732640084,0.89694817844431,1.92201649936711,1.27159140695737,2.10063767259082,0.412210116953756,1.8034837803194,0.744467425326359,2.19409231913646,0.389748020644795,1.51460264546469,0.552299391853796,1.13152239773168,2.84007674013291,0.302256294682921,0.339121184620975,0,0,0,0,0,0,0.207322110030741,0,0,1.56449532329816,4.5026865673502,0,0.928735856063958,1.44375896333917,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0.343135620597051,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,0,1.44331342025273,0.115930404975077,0.352226082707465,0.577465791044295,0.462985512576611,1.14152491340759,0.790204397959275,0,1.96973604869918,0.936017060556951,1.78357394746474,0,0,0.283550194484773,0.268675568108545,0.581267877027924,0.766765358330422,0,0.088048434013226,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.22001485746285,0,0,1.690605505112,0.531876233169741,2.08014873822732,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0,0,0.602878754119172,0,0.299918973546171,0,2.00902836572851,6.32501818449095,0.718874566474748,0,0,1.01346914667305,1.84928690295345,1.61154866915906,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,1.34960640891054,1.00034104211935,1.89885516589815,1.66376689224646,5.35286966391485,0.946214490203608,0.35142424497814,0,0,0,0.664225598535437,0.184369168541703,0.955719759148911,0.391602314925481,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0.306923946576125,2.52594084989766,0.768834895534206,0,0.64341568457443,0,1.69630663182921,1.59805552781814,0.739144404124282,3.63478100428535,1.27831416305955,0.120859449591622,0,0.184161977871793,1.03333003348146,0.364182336013434,0.393373244878272,0,0.15403067420883,0.784349769176855,0,0.422206515571503,1.13733384070897,0.170093705276516,0.431831832204279,1.54227252690289,0.270946437543853,0,0,0,0.447749509444357,0,0,0,0,0,0.515205058238611,0.457847324091717,0,0,0,0,0.773365746336976,1.23238893691716,1.38153307253517,0.275673144969061,0.859361958946189,0.725083469571143,0.681813019328807,0.267096106940212,0.165284915360978,0.192190067365106,0,0.2023155617111,1.39453664789186,2.51849877464512,1.3940745403212,0.616067160352178,0.532306030317022,0,0.74129687641568,0.572499546967965,0,0.632758849437452,0.38126038784765,0,0.855877976067841,1.90921948755562,2.35484592059769,0.719489830333259,1.37268514868027,0.942499218765491,1.2130948894399,4.75530963519025,0.842516912477962,0.48763373908959,1.46228093778771,1.05650146756755,1.09199929126389,0.989838023675989,0,0.551365343546124,1.32687795048244,2.63070531152258,1.15755106853338,2.62357900818653,0.405820753925408,0.6196469961995,0.563391205064483,0.286822704408103,0.294747123039363,1.426684205925,1.41904425628239,0.633322905892992,0.987884678879706,0,0,0,0.670302275535787,0,0.0941438007767792,0,1.68471475667626,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.140669416410513,0.667852230137435,0,0,0.398495976502139,0.2762839155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| |||
|short_description=p@chr10:33545308..33545344,- | |||
}} |
Latest revision as of 13:21, 23 July 2015
Short description: | p@chr10:33545308..33545344, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:33545308..33545344, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.48e-11 | 427 |
somatic stem cell | 4.58e-11 | 433 |
muscle precursor cell | 1.49e-10 | 58 |
myoblast | 1.49e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.49e-10 | 58 |
stem cell | 1.96e-10 | 441 |
smooth muscle cell | 4.78e-10 | 43 |
smooth muscle myoblast | 4.78e-10 | 43 |
muscle cell | 1.99e-08 | 55 |
vascular associated smooth muscle cell | 2.92e-08 | 32 |
electrically responsive cell | 7.54e-08 | 61 |
electrically active cell | 7.54e-08 | 61 |
cardiac mesenchymal cell | 1.99e-07 | 4 |
migratory trunk neural crest cell | 1.99e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.41e-09 | 14 |
benign neoplasm | 1.05e-07 | 4 |