FFCP PHASE1:Hg19::chr10:52382166..52382176,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:52382166..52382176,+ | |||
|description=CAGE_peak_at_chr10:52382166..52382176,+ | |description=CAGE_peak_at_chr10:52382166..52382176,+ | ||
|id=chr10:52382166..52382176,+ | |id=chr10:52382166..52382176,+ | ||
|ontology_enrichment_celltype=CL:0000766!4.44e-10!76;CL:0000738!2.30e-09!140;CL:0000988!3.30e-09!182;CL:0000763!5.77e-09!112;CL:0000049!5.77e-09!112;CL:0000037!7.38e-09!172;CL:0000566!7.38e-09!172;CL:0002032!8.15e-09!165;CL:0000837!8.15e-09!165;CL:0000094!1.40e-08!8;CL:0002031!4.68e-07!124;CL:0002057!5.77e-07!42;CL:0000839!8.67e-07!70 | |ontology_enrichment_celltype=CL:0000766!4.44e-10!76;CL:0000738!2.30e-09!140;CL:0000988!3.30e-09!182;CL:0000763!5.77e-09!112;CL:0000049!5.77e-09!112;CL:0000037!7.38e-09!172;CL:0000566!7.38e-09!172;CL:0002032!8.15e-09!165;CL:0000837!8.15e-09!165;CL:0000094!1.40e-08!8;CL:0002031!4.68e-07!124;CL:0002057!5.77e-07!42;CL:0000839!8.67e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000771;2.42e-50;2!CL:0000094;1.80e-28;8!CL:0000081;6.10e-21;11!CL:0000746;1.14e-09;3!CL:0000767;1.53e-09;3!CL:0000737;1.44e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,3.11e-50,2;CL:0000094,1.64e-28,8;CL:0000081,5.70e-21,11;CL:0000746,1.10e-09,3;CL:0000513,1.10e-09,3;CL:0000767,1.30e-09,3;CL:0000737,1.40e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.27e-33;3!UBERON:0005425;7.62e-26;1!CL:0000513;1.14e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.39e-09!102;UBERON:0003061!3.39e-09!102;UBERON:0005383!3.60e-08!3;UBERON:0005382!3.60e-08!3;UBERON:0002193!8.00e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;7.62e-26;1!UBERON:0001785;7.62e-26;1!UBERON:0002464;7.62e-26;1!UBERON:0004904;7.62e-26;1!UBERON:0001021;7.62e-26;1!UBERON:0003714;1.21e-13;2!UBERON:0005162;1.21e-13;2!UBERON:0000122;1.21e-13;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.93e-26,1;UBERON:0001785,5.93e-26,1;UBERON:0002464,5.93e-26,1;UBERON:0004904,5.93e-26,1;UBERON:0001021,5.93e-26,1;UBERON:0003902,5.93e-26,1;UBERON:0005425,5.93e-26,1;UBERON:0000966,2.38e-17,6;UBERON:0005388,2.38e-17,6;UBERON:0001802,2.38e-17,6;UBERON:0003714,1.07e-13,2;UBERON:0005162,1.07e-13,2;UBERON:0000122,1.07e-13,2;UBERON:0001781,1.69e-07,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,1.57345710739562,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0,0.709446689665756,0,0,1.35426486594342,0.188242339542605,0.272906150057846,0,0,0.320929027076094,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.403213486449465,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0.134802265961354,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.449947783103001,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0.215927591218621,0,1.00067161847319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0.594092800654172,0,0,0,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0.31037357147929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:52382166..52382176,+ | |short_description=p@chr10:52382166..52382176,+ | ||
}} | }} |
Latest revision as of 14:06, 23 July 2015
Short description: | p@chr10:52382166..52382176, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:52382166..52382176, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 3.11e-50 | 2 |
granulocyte | 1.64e-28 | 8 |
blood cell | 5.70e-21 | 11 |
cardiac muscle cell | 1.10e-09 | 3 |
cardiac muscle myoblast | 1.10e-09 | 3 |
basophil | 1.30e-09 | 3 |
striated muscle cell | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 5.93e-26 | 1 |
cranial nerve | 5.93e-26 | 1 |
nerve trunk | 5.93e-26 | 1 |
nerve connecting eye with brain | 5.93e-26 | 1 |
nerve | 5.93e-26 | 1 |
retinal neural layer | 5.93e-26 | 1 |
presumptive neural retina | 5.93e-26 | 1 |
retina | 2.38e-17 | 6 |
photoreceptor array | 2.38e-17 | 6 |
posterior segment of eyeball | 2.38e-17 | 6 |
neural tissue | 1.07e-13 | 2 |
multi cell component structure | 1.07e-13 | 2 |
neuron projection bundle | 1.07e-13 | 2 |
layer of retina | 1.69e-07 | 4 |