FFCP PHASE1:Hg19::chr10:60588982..60588987,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=27bp_to_AK130049_5end | |association_with_transcript=27bp_to_AK130049_5end | ||
|cluster_id=chr10:60588982..60588987,+ | |||
|description=CAGE_peak_1_at_AK130049_5end | |description=CAGE_peak_1_at_AK130049_5end | ||
|id=chr10:60588982..60588987,+ | |id=chr10:60588982..60588987,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.28e-26!180;CL:0000057!4.35e-15!75;CL:0000680!2.46e-11!57;CL:0000056!2.46e-11!57;CL:0000355!2.46e-11!57;CL:0000187!1.58e-10!54;CL:0000183!7.66e-10!59;CL:0000393!2.46e-09!60;CL:0000211!2.46e-09!60;CL:0000192!8.87e-08!42;CL:0000514!8.87e-08!42;CL:0002334!2.48e-07!12 | |ontology_enrichment_celltype=CL:0000055!1.28e-26!180;CL:0000057!4.35e-15!75;CL:0000680!2.46e-11!57;CL:0000056!2.46e-11!57;CL:0000355!2.46e-11!57;CL:0000187!1.58e-10!54;CL:0000183!7.66e-10!59;CL:0000393!2.46e-09!60;CL:0000211!2.46e-09!60;CL:0000192!8.87e-08!42;CL:0000514!8.87e-08!42;CL:0002334!2.48e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002334;6.73e-08;12!CL:0000499;2.87e-07;28!CL:0000057;6.84e-07;73!CL:0000359;8.32e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.20e-16,76;CL:0000680,4.44e-11,58;CL:0000056,4.44e-11,58;CL:0000355,4.44e-11,58;CL:0000187,3.21e-10,55;CL:0000393,2.50e-08,61;CL:0000211,2.50e-08,61;CL:0002334,7.15e-08,12;CL:0000192,3.44e-07,43;CL:0000514,3.44e-07,43;CL:0000499,3.71e-07,28;CL:0000359,5.85e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.93e-21!347;UBERON:0005256!1.67e-19!143;UBERON:0000475!2.57e-17!365;UBERON:0003104!4.74e-17!238;UBERON:0009142!4.74e-17!238;UBERON:0000914!4.09e-15!83;UBERON:0002329!4.09e-15!83;UBERON:0003077!4.09e-15!83;UBERON:0003059!4.09e-15!83;UBERON:0007282!4.09e-15!83;UBERON:0009618!4.09e-15!83;UBERON:0007285!4.09e-15!83;UBERON:0002100!8.61e-15!216;UBERON:0004290!8.32e-13!70;UBERON:0000486!3.17e-12!82;UBERON:0001134!3.47e-12!61;UBERON:0002036!3.47e-12!61;UBERON:0003082!3.47e-12!61;UBERON:0002385!5.18e-12!63;UBERON:0001015!5.18e-12!63;UBERON:0000383!5.18e-12!63;UBERON:0000468!2.63e-11!659;UBERON:0000119!5.53e-11!312;UBERON:0000483!7.46e-11!309;UBERON:0003102!9.89e-11!95;UBERON:0000467!2.42e-09!625;UBERON:0000480!3.94e-09!626;UBERON:0000477!8.25e-09!286;UBERON:0002050!9.11e-09!605;UBERON:0005423!9.11e-09!605;UBERON:0000922!1.36e-08!612;UBERON:0000923!1.54e-08!604;UBERON:0005291!1.54e-08!604;UBERON:0006598!1.54e-08!604;UBERON:0002532!1.54e-08!604;UBERON:0000490!5.89e-08!138;UBERON:0003103!1.20e-07!69;UBERON:0000948!1.53e-07!24;UBERON:0005498!1.53e-07!24;UBERON:0004140!1.53e-07!24;UBERON:0009881!1.53e-07!24;UBERON:0004141!1.53e-07!24;UBERON:0003084!1.53e-07!24;UBERON:0007005!1.53e-07!24;UBERON:0004139!1.53e-07!24;UBERON:0004291!1.53e-07!24;UBERON:0000062!1.63e-07!511;UBERON:0003914!3.04e-07!118;UBERON:0007100!6.27e-07!27 | |ontology_enrichment_uberon=UBERON:0000481!2.93e-21!347;UBERON:0005256!1.67e-19!143;UBERON:0000475!2.57e-17!365;UBERON:0003104!4.74e-17!238;UBERON:0009142!4.74e-17!238;UBERON:0000914!4.09e-15!83;UBERON:0002329!4.09e-15!83;UBERON:0003077!4.09e-15!83;UBERON:0003059!4.09e-15!83;UBERON:0007282!4.09e-15!83;UBERON:0009618!4.09e-15!83;UBERON:0007285!4.09e-15!83;UBERON:0002100!8.61e-15!216;UBERON:0004290!8.32e-13!70;UBERON:0000486!3.17e-12!82;UBERON:0001134!3.47e-12!61;UBERON:0002036!3.47e-12!61;UBERON:0003082!3.47e-12!61;UBERON:0002385!5.18e-12!63;UBERON:0001015!5.18e-12!63;UBERON:0000383!5.18e-12!63;UBERON:0000468!2.63e-11!659;UBERON:0000119!5.53e-11!312;UBERON:0000483!7.46e-11!309;UBERON:0003102!9.89e-11!95;UBERON:0000467!2.42e-09!625;UBERON:0000480!3.94e-09!626;UBERON:0000477!8.25e-09!286;UBERON:0002050!9.11e-09!605;UBERON:0005423!9.11e-09!605;UBERON:0000922!1.36e-08!612;UBERON:0000923!1.54e-08!604;UBERON:0005291!1.54e-08!604;UBERON:0006598!1.54e-08!604;UBERON:0002532!1.54e-08!604;UBERON:0000490!5.89e-08!138;UBERON:0003103!1.20e-07!69;UBERON:0000948!1.53e-07!24;UBERON:0005498!1.53e-07!24;UBERON:0004140!1.53e-07!24;UBERON:0009881!1.53e-07!24;UBERON:0004141!1.53e-07!24;UBERON:0003084!1.53e-07!24;UBERON:0007005!1.53e-07!24;UBERON:0004139!1.53e-07!24;UBERON:0004291!1.53e-07!24;UBERON:0000062!1.63e-07!511;UBERON:0003914!3.04e-07!118;UBERON:0007100!6.27e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.61e-08;31!UBERON:0001015;1.61e-08;31!UBERON:0000383;1.61e-08;31!UBERON:0000948;3.69e-07;22 | |||
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|phase1_expression=25.2532947186074,20.5536502935344,19.733616573436,0,3.12872766099101,6.97870819280295,0,5.68547886084148,7.83556884599516,1.72013755551056,0.697801167972428,0.218441372130172,0.263766978228454,10.7676727075241,5.30235801164665,10.7572023432284,10.2458069764076,12.4152715365853,9.75865597581014,0.369363174230364,1.22400414746552,2.82109249330279,2.57612388417951,2.46373965131192,2.00868223351684,0,0,0,0,0,0,0,0,0.369754010166788,0.0774672005803016,5.82893853198428,0,0.553995408531877,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,2.42159801053347,0,0,0,0,0,0.22465726229299,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.8187552945358,12.0726154746655,12.4026684988224,19.156275076382,15.0401373190767,67.353631316783,3.1811437882044,12.6525066278685,2.07976597760949,2.4390233720882,7.02678285545008,2.22664428346111,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0.417989933073621,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,19.8788780678127,17.6016411213766,16.5511476016523,4.30254931123221,14.1867352879343,6.16745360156538,4.2699598291882,15.7867230986982,18.3614510885862,5.38842688278752,4.08654757783647,1.66493170409425,5.18558332031999,0.468642863667593,2.80944069147288,1.1409436430889,11.2086510413851,1.17434498643765,1.94247533241758,2.80901613404497,18.5780295841953,7.24722472139431,10.8492070234554,41.5801000048719,39.068174826012,0,0.718618141816238,8.41680569770331,5.38009635449446,5.54128230968366,12.2913733846635,27.5839016219118,22.9864230127093,15.5402090929229,2.33206526395521,18.7930502160339,16.7426201916054,0.900273288253207,10.099147865367,1.8034837803194,8.74749224758472,10.2953562667172,9.25651549031387,4.79624171063818,25.5898718225592,17.9427123068881,1.42003837006646,2.31729825923573,8.47802961552438,1.93260853163297,1.90922284413584,4.01526433544605,0.243947412259191,0,0.69716365721711,0.10366105501537,0,0.36497735907583,4.69348596989448,42.4539019207304,2.76269842704961,21.825292617503,8.66255378003503,19.8755424066938,16.8584690078102,19.7629044504455,19.3014452281689,17.4303555273925,20.1680026244432,16.4494195955401,15.1090528146516,11.5424147083917,0,0,2.057870056657,4.41026134156626,0,0.982827216677626,2.36315962672562,0,15.2505663793461,4.97546649865724,3.18275827685014,1.1240175325762,0.502644862058154,1.574003567695,1.3032332212413,1.03993478527958,0,0.811512834825538,0.587043471179108,0,0,0,0,0,0,0,0,0.93733833986777,3.19166043577833,0.567100388969546,10.4783471562332,3.19697332365358,0.766765358330422,0,0,0.414656231081544,0.432359860250884,0.12624243342638,2.53991577168676,0,0,0,1.54241239054985,0.300343057843917,2.5724378936752,0.672786506072164,0.87192013766656,10.7073897298587,9.04902010304444,3.57656445851882,6.762422020448,6.91439103120663,1.04007436911366,1.80045161983499,0,0.532844358032199,20.302875099457,1.08524321078289,1.64648067356154,6.18898750158097,13.8602860009593,2.37585561880029,26.8281045583032,13.0730018790044,13.8962457743059,0,0,0,6.23024624278115,3.44585807502342,0,8.10775317338444,11.3011977402711,8.59492623551499,0,0,0,0,0.76228387266739,1.30139853857622,0.773288812777695,1.00509759200609,3.18969375826582,0,0,0,18.2810322661518,15.0051156317903,5.69656549769445,55.9441617517871,58.3462793366719,43.525866549366,33.6195861029087,12.9406822882919,9.09630016223939,1.03473071292505,12.6202863721733,2.02806085395873,16.8554212068081,0.195801157462741,0.343143423810856,0,0,0.106727557803444,0,0,0.604780586659361,24.0664573584214,17.187741008263,22.1721474602128,28.0624736869985,14.3278029738677,37.3181097053169,4.45254199334973,27.1409061092674,25.5688884450903,25.2951640522532,21.8086860257121,7.20504346451747,12.9319611063036,13.8349464509267,0.828728900423067,11.5962592646253,21.1225754887792,28.0606248013168,6.31679458070376,73.0875549120896,0.784349769176855,4.38417673959782,75.574966287299,0,0,9.93213214069841,0,8.12839312631558,12.0405545725165,8.6657932835313,5.81753206250107,15.2234833211081,0,0,1.02580050046556,0.328014645699706,1.30151357865721,3.91555844261345,9.065377017016,8.16844049213821,5.74265537996172,5.20048196829217,64.2735719376638,17.2073878559977,3.69716681075147,4.29810289233163,6.34048233428841,20.409846524972,18.5621368210213,4.09087811597284,30.0928280485972,2.97512847649761,2.88285101047659,3.95599408733211,0.2023155617111,10.6914476338376,7.24068397710472,18.1229690241756,5.85263802334569,7.45228442443831,6.08953094452551,13.899316432794,3.00562262158182,5.58237554039501,14.5534535370614,6.1001662055624,0.767693373934002,1.28381696410176,6.68226820644467,6.27958912159384,13.8501792339152,8.23611089208164,7.42218134777825,5.45892700247953,7.92551605865041,5.05510147486777,0.975267478179181,13.1605284400894,0,8.05349477307116,26.160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| ||
|short_description=p1@AK130049 | |short_description=p1@AK130049 | ||
}} | }} |
Latest revision as of 14:20, 23 July 2015
Short description: | p1@AK130049 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK130049_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_AK130049_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.20e-16 | 76 |
muscle precursor cell | 4.44e-11 | 58 |
myoblast | 4.44e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.44e-11 | 58 |
muscle cell | 3.21e-10 | 55 |
electrically responsive cell | 2.50e-08 | 61 |
electrically active cell | 2.50e-08 | 61 |
preadipocyte | 7.15e-08 | 12 |
smooth muscle cell | 3.44e-07 | 43 |
smooth muscle myoblast | 3.44e-07 | 43 |
stromal cell | 3.71e-07 | 28 |
vascular associated smooth muscle cell | 5.85e-07 | 32 |