FFCP PHASE1:Hg19::chr10:75012491..75012523,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-25bp_to_ENST00000457147,uc001jtu.1_5end | |||
|cluster_id=chr10:75012491..75012523,+ | |||
|description=CAGE_peak_2_at_ENST00000457147_5end,CAGE_peak_2_at_uc001jtu.1_5end | |||
|id=chr10:75012491..75012523,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.35e-10!53;CL:0000051!1.35e-10!53;CL:0000838!3.36e-10!52;CL:0000945!1.81e-08!24;CL:0000826!1.81e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;8.50e-12;24!CL:0000542;2.07e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.30e-13,53;CL:0000051,2.30e-13,53;CL:0000838,8.57e-13,52;CL:0000945,5.36e-12,24;CL:0000826,5.36e-12,24;CL:0000236,6.76e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;2.07e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.05e-13!57;UBERON:0005068!1.05e-13!57;UBERON:0006241!1.05e-13!57;UBERON:0007135!1.05e-13!57;UBERON:0007023!4.88e-12!115;UBERON:0002616!3.02e-11!59;UBERON:0000955!3.68e-11!69;UBERON:0006238!3.68e-11!69;UBERON:0001017!1.21e-10!82;UBERON:0000073!1.67e-10!94;UBERON:0001016!1.67e-10!94;UBERON:0005743!2.12e-10!86;UBERON:0002780!3.40e-10!41;UBERON:0001890!3.40e-10!41;UBERON:0006240!3.40e-10!41;UBERON:0003080!1.90e-09!42;UBERON:0003075!3.18e-09!86;UBERON:0007284!3.18e-09!86;UBERON:0002346!8.43e-09!90;UBERON:0000153!8.78e-08!129;UBERON:0007811!8.78e-08!129;UBERON:0003056!3.53e-07!61;UBERON:0001893!5.20e-07!34;UBERON:0002020!5.45e-07!34;UBERON:0003528!5.45e-07!34;UBERON:0002791!9.59e-07!33;UBERON:0000033!9.94e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;5.06e-11;53!UBERON:0002616;5.06e-11;53!UBERON:0002780;3.58e-10;41!UBERON:0001890;3.58e-10;41!UBERON:0001893;8.14e-08;34!UBERON:0003528;1.09e-07;34!UBERON:0002020;1.09e-07;34!UBERON:0002791;1.79e-07;32!UBERON:0001869;2.65e-07;32!UBERON:0001894;6.13e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.62e-19,56;UBERON:0005068,2.62e-19,56;UBERON:0006241,2.62e-19,56;UBERON:0007135,2.62e-19,56;UBERON:0000073,7.76e-19,53;UBERON:0002616,7.76e-19,53;UBERON:0000955,2.68e-14,68;UBERON:0006238,2.68e-14,68;UBERON:0002780,3.03e-14,41;UBERON:0001890,3.03e-14,41;UBERON:0003080,3.03e-14,41;UBERON:0006240,3.03e-14,41;UBERON:0003075,5.01e-13,82;UBERON:0007284,5.01e-13,82;UBERON:0001016,1.76e-12,89;UBERON:0001017,2.03e-12,81;UBERON:0007023,3.40e-12,114;UBERON:0002346,1.08e-11,86;UBERON:0003056,1.19e-10,61;UBERON:0010371,6.64e-10,104;UBERON:0001893,1.65e-09,34;UBERON:0003528,1.77e-09,34;UBERON:0002020,1.77e-09,34;UBERON:0002791,1.75e-08,32;UBERON:0001869,2.36e-08,32;UBERON:0001894,2.86e-07,7;UBERON:0006222,2.86e-07,7;UBERON:0010314,7.88e-07,132 | |||
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| |||
|short_description=p2@ENST00000457147,p2@uc001jtu.1 | |||
}} |
Latest revision as of 15:31, 23 July 2015
Short description: | p2@ENST00000457147, p2@uc001jtu.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000457147_5end, CAGE_peak_2_at_uc001jtu.1_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_ENST00000457147, uc001jtu.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.30e-13 | 53 |
common lymphoid progenitor | 2.30e-13 | 53 |
lymphoid lineage restricted progenitor cell | 8.57e-13 | 52 |
lymphocyte of B lineage | 5.36e-12 | 24 |
pro-B cell | 5.36e-12 | 24 |
B cell | 6.76e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
neural tube | 2.62e-19 | 56 |
neural rod | 2.62e-19 | 56 |
future spinal cord | 2.62e-19 | 56 |
neural keel | 2.62e-19 | 56 |
regional part of nervous system | 7.76e-19 | 53 |
regional part of brain | 7.76e-19 | 53 |
brain | 2.68e-14 | 68 |
future brain | 2.68e-14 | 68 |
regional part of forebrain | 3.03e-14 | 41 |
forebrain | 3.03e-14 | 41 |
anterior neural tube | 3.03e-14 | 41 |
future forebrain | 3.03e-14 | 41 |
neural plate | 5.01e-13 | 82 |
presumptive neural plate | 5.01e-13 | 82 |
nervous system | 1.76e-12 | 89 |
central nervous system | 2.03e-12 | 81 |
adult organism | 3.40e-12 | 114 |
neurectoderm | 1.08e-11 | 86 |
pre-chordal neural plate | 1.19e-10 | 61 |
ecto-epithelium | 6.64e-10 | 104 |
telencephalon | 1.65e-09 | 34 |
brain grey matter | 1.77e-09 | 34 |
gray matter | 1.77e-09 | 34 |
regional part of telencephalon | 1.75e-08 | 32 |
cerebral hemisphere | 2.36e-08 | 32 |
diencephalon | 2.86e-07 | 7 |
future diencephalon | 2.86e-07 | 7 |
structure with developmental contribution from neural crest | 7.88e-07 | 132 |