FFCP PHASE1:Hg19::chr10:76939790..76939794,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:76939790..76939794,+
|short_description=p@chr10:76939790..76939794,+
|description=CAGE_peak_at_chr10:76939790..76939794,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:76939790..76939794,+ | |||
|description=CAGE_peak_at_chr10:76939790..76939794,+ | |||
|id=chr10:76939790..76939794,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!3.21e-11!41;UBERON:0001890!3.21e-11!41;UBERON:0006240!3.21e-11!41;UBERON:0001049!5.96e-11!57;UBERON:0005068!5.96e-11!57;UBERON:0006241!5.96e-11!57;UBERON:0007135!5.96e-11!57;UBERON:0003080!1.85e-10!42;UBERON:0002020!2.75e-10!34;UBERON:0003528!2.75e-10!34;UBERON:0001893!3.76e-09!34;UBERON:0001869!6.28e-09!32;UBERON:0002791!6.91e-09!33;UBERON:0002616!1.25e-08!59;UBERON:0001017!1.59e-08!82;UBERON:0000955!1.83e-08!69;UBERON:0006238!1.83e-08!69;UBERON:0000073!4.93e-08!94;UBERON:0001016!4.93e-08!94;UBERON:0005743!5.71e-08!86;UBERON:0000956!7.44e-08!25;UBERON:0000203!7.44e-08!25;UBERON:0002619!8.32e-08!22;UBERON:0002346!1.81e-07!90;UBERON:0007023!2.77e-07!115;UBERON:0003075!3.35e-07!86;UBERON:0007284!3.35e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.96e-11;41!UBERON:0001890;7.96e-11;41!UBERON:0003528;1.41e-09;34!UBERON:0002020;1.41e-09;34!UBERON:0002791;3.98e-09;32!UBERON:0002619;4.19e-08;22!UBERON:0001869;5.21e-08;32!UBERON:0000073;6.23e-08;53!UBERON:0002616;6.23e-08;53!UBERON:0001893;1.02e-07;34!UBERON:0000125;1.53e-07;9!UBERON:0002308;1.53e-07;9!UBERON:0001894;1.92e-07;7!UBERON:0000956;8.54e-07;25!UBERON:0000203;8.54e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.13e-15,56;UBERON:0005068,1.13e-15,56;UBERON:0006241,1.13e-15,56;UBERON:0007135,1.13e-15,56;UBERON:0002780,3.05e-14,41;UBERON:0001890,3.05e-14,41;UBERON:0003080,3.05e-14,41;UBERON:0006240,3.05e-14,41;UBERON:0000073,2.97e-13,53;UBERON:0002616,2.97e-13,53;UBERON:0003075,9.38e-13,82;UBERON:0007284,9.38e-13,82;UBERON:0002346,1.68e-12,86;UBERON:0003528,2.55e-12,34;UBERON:0002020,2.55e-12,34;UBERON:0007023,5.83e-11,114;UBERON:0001017,1.14e-10,81;UBERON:0001016,2.48e-10,89;UBERON:0002791,2.92e-10,32;UBERON:0010371,4.57e-10,104;UBERON:0003056,1.71e-09,61;UBERON:0001893,2.18e-09,34;UBERON:0000955,2.18e-09,68;UBERON:0006238,2.18e-09,68;UBERON:0001869,6.75e-09,32;UBERON:0002619,2.38e-08,22;UBERON:0000125,1.04e-07,9;UBERON:0002308,1.04e-07,9;UBERON:0001894,1.70e-07,7;UBERON:0006222,1.70e-07,7;UBERON:0000956,5.27e-07,25;UBERON:0000203,5.27e-07,25 | |||
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| ||
|short_description=p@chr10:76939790..76939794,+ | |||
}} | }} |
Latest revision as of 15:42, 23 July 2015
Short description: | p@chr10:76939790..76939794, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:76939790..76939794, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.13e-15 | 56 |
neural rod | 1.13e-15 | 56 |
future spinal cord | 1.13e-15 | 56 |
neural keel | 1.13e-15 | 56 |
regional part of forebrain | 3.05e-14 | 41 |
forebrain | 3.05e-14 | 41 |
anterior neural tube | 3.05e-14 | 41 |
future forebrain | 3.05e-14 | 41 |
regional part of nervous system | 2.97e-13 | 53 |
regional part of brain | 2.97e-13 | 53 |
neural plate | 9.38e-13 | 82 |
presumptive neural plate | 9.38e-13 | 82 |
neurectoderm | 1.68e-12 | 86 |
brain grey matter | 2.55e-12 | 34 |
gray matter | 2.55e-12 | 34 |
adult organism | 5.83e-11 | 114 |
central nervous system | 1.14e-10 | 81 |
nervous system | 2.48e-10 | 89 |
regional part of telencephalon | 2.92e-10 | 32 |
ecto-epithelium | 4.57e-10 | 104 |
pre-chordal neural plate | 1.71e-09 | 61 |
telencephalon | 2.18e-09 | 34 |
brain | 2.18e-09 | 68 |
future brain | 2.18e-09 | 68 |
cerebral hemisphere | 6.75e-09 | 32 |
regional part of cerebral cortex | 2.38e-08 | 22 |
neural nucleus | 1.04e-07 | 9 |
nucleus of brain | 1.04e-07 | 9 |
diencephalon | 1.70e-07 | 7 |
future diencephalon | 1.70e-07 | 7 |
cerebral cortex | 5.27e-07 | 25 |
pallium | 5.27e-07 | 25 |