FFCP PHASE1:Hg19::chr10:80732642..80732657,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:80732642..80732657,+ | |||
|coexpression_cluster_id=C728 | |||
|description=CAGE_peak_at_chr10:80732642..80732657,+ | |description=CAGE_peak_at_chr10:80732642..80732657,+ | ||
|id=chr10:80732642..80732657,+ | |id=chr10:80732642..80732657,+ | ||
|ontology_enrichment_celltype=CL:0000860!2.76e-46!45;CL:0002057!2.50e-42!42;CL:0000839!7.71e-41!70;CL:0000766!1.14e-40!76;CL:0000557!4.50e-40!71;CL:0002194!5.51e-35!63;CL:0000576!5.51e-35!63;CL:0000040!5.51e-35!63;CL:0000559!5.51e-35!63;CL:0002009!1.53e-33!65;CL:0000763!2.01e-24!112;CL:0000049!2.01e-24!112;CL:0000738!9.29e-18!140;CL:0002031!2.54e-17!124;CL:0002087!5.14e-15!119;CL:0000037!8.94e-13!172;CL:0000566!8.94e-13!172;CL:0002032!2.61e-12!165;CL:0000837!2.61e-12!165;CL:0000988!2.30e-11!182;CL:0000134!1.65e-10!358;CL:0002274!2.68e-10!5;CL:0000457!2.68e-10!5;CL:0002191!2.68e-10!5;CL:0000097!2.68e-10!5;CL:0000831!2.68e-10!5;CL:0002028!2.68e-10!5;CL:0002320!5.96e-10!365;CL:0000219!6.24e-10!390;CL:0000034!4.06e-07!444;CL:0000048!4.92e-07!430 | |ontology_enrichment_celltype=CL:0000860!2.76e-46!45;CL:0002057!2.50e-42!42;CL:0000839!7.71e-41!70;CL:0000766!1.14e-40!76;CL:0000557!4.50e-40!71;CL:0002194!5.51e-35!63;CL:0000576!5.51e-35!63;CL:0000040!5.51e-35!63;CL:0000559!5.51e-35!63;CL:0002009!1.53e-33!65;CL:0000763!2.01e-24!112;CL:0000049!2.01e-24!112;CL:0000738!9.29e-18!140;CL:0002031!2.54e-17!124;CL:0002087!5.14e-15!119;CL:0000037!8.94e-13!172;CL:0000566!8.94e-13!172;CL:0002032!2.61e-12!165;CL:0000837!2.61e-12!165;CL:0000988!2.30e-11!182;CL:0000134!1.65e-10!358;CL:0002274!2.68e-10!5;CL:0000457!2.68e-10!5;CL:0002191!2.68e-10!5;CL:0000097!2.68e-10!5;CL:0000831!2.68e-10!5;CL:0002028!2.68e-10!5;CL:0002320!5.96e-10!365;CL:0000219!6.24e-10!390;CL:0000034!4.06e-07!444;CL:0000048!4.92e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.51e-84;33!CL:0002057;2.51e-84;33!CL:0000473;4.05e-65;39!CL:0000234;4.05e-65;39!CL:0000576;2.04e-41;48!CL:0000766;1.35e-27;69!CL:0000097;1.29e-14;5!CL:0000763;6.29e-14;100!CL:0000738;1.84e-10;136!CL:0002087;3.71e-10;104!CL:0000163;2.47e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.05e-73,42;CL:0002057,1.05e-73,42;CL:0000473,2.33e-70,48;CL:0000234,2.33e-70,48;CL:0000839,4.52e-65,66;CL:0000557,4.67e-64,67;CL:0000766,2.10e-59,72;CL:0002194,1.50e-55,59;CL:0000576,1.50e-55,59;CL:0000040,1.50e-55,59;CL:0000559,1.50e-55,59;CL:0002009,1.23e-53,61;CL:0000763,1.77e-38,108;CL:0000049,1.77e-38,108;CL:0002031,2.91e-34,120;CL:0000738,8.68e-30,136;CL:0002087,6.69e-27,115;CL:0002032,1.47e-24,161;CL:0000837,1.47e-24,161;CL:0000037,2.27e-23,168;CL:0000988,5.59e-22,177;CL:0000097,1.24e-14,5;CL:0002028,1.24e-14,5;CL:0000134,6.19e-10,354;CL:0002320,1.18e-09,361;CL:0000219,1.13e-08,386;CL:0000163,2.41e-08,9;CL:0000048,1.81e-07,427;CL:0000723,2.65e-07,433;CL:0000034,4.35e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;7.06e-56;42!CL:0000049;1.35e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.28e-38!80;UBERON:0001474!1.27e-37!86;UBERON:0004765!2.60e-31!101;UBERON:0001434!2.60e-31!101;UBERON:0002390!1.12e-29!102;UBERON:0003061!1.12e-29!102;UBERON:0002405!7.67e-29!115;UBERON:0002193!9.64e-26!112;UBERON:0003081!1.95e-15!216;UBERON:0002204!4.29e-15!167;UBERON:0002384!2.73e-10!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.32e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.79e-61,76;UBERON:0001474,3.30e-56,82;UBERON:0004765,6.41e-51,90;UBERON:0002405,3.62e-49,93;UBERON:0002390,1.75e-46,98;UBERON:0003061,1.75e-46,98;UBERON:0001434,1.75e-45,100;UBERON:0002193,7.50e-42,108;UBERON:0002204,1.02e-25,167;UBERON:0003081,1.92e-20,203;UBERON:0000926,1.13e-11,315;UBERON:0004120,1.13e-11,315;UBERON:0006603,1.13e-11,315;UBERON:0002384,2.55e-10,371;UBERON:0007195,1.53e-08,1 | |||
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| ||
|short_description=p@chr10:80732642..80732657,+ | |short_description=p@chr10:80732642..80732657,+ | ||
}} | }} |
Latest revision as of 15:51, 23 July 2015
Short description: | p@chr10:80732642..80732657, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:80732642..80732657, + |
Coexpression cluster: | C728_Mast_CD14_Basophils_chorionic_immature_Monocytederived_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.05e-73 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.05e-73 | 42 |
defensive cell | 2.33e-70 | 48 |
phagocyte | 2.33e-70 | 48 |
myeloid lineage restricted progenitor cell | 4.52e-65 | 66 |
granulocyte monocyte progenitor cell | 4.67e-64 | 67 |
myeloid leukocyte | 2.10e-59 | 72 |
monopoietic cell | 1.50e-55 | 59 |
monocyte | 1.50e-55 | 59 |
monoblast | 1.50e-55 | 59 |
promonocyte | 1.50e-55 | 59 |
macrophage dendritic cell progenitor | 1.23e-53 | 61 |
myeloid cell | 1.77e-38 | 108 |
common myeloid progenitor | 1.77e-38 | 108 |
hematopoietic lineage restricted progenitor cell | 2.91e-34 | 120 |
leukocyte | 8.68e-30 | 136 |
nongranular leukocyte | 6.69e-27 | 115 |
hematopoietic oligopotent progenitor cell | 1.47e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.47e-24 | 161 |
hematopoietic stem cell | 2.27e-23 | 168 |
hematopoietic cell | 5.59e-22 | 177 |
mast cell | 1.24e-14 | 5 |
basophil mast progenitor cell | 1.24e-14 | 5 |
mesenchymal cell | 6.19e-10 | 354 |
connective tissue cell | 1.18e-09 | 361 |
motile cell | 1.13e-08 | 386 |
endocrine cell | 2.41e-08 | 9 |
multi fate stem cell | 1.81e-07 | 427 |
somatic stem cell | 2.65e-07 | 433 |
stem cell | 4.35e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.79e-61 | 76 |
bone element | 3.30e-56 | 82 |
skeletal element | 6.41e-51 | 90 |
immune system | 3.62e-49 | 93 |
hematopoietic system | 1.75e-46 | 98 |
blood island | 1.75e-46 | 98 |
skeletal system | 1.75e-45 | 100 |
hemolymphoid system | 7.50e-42 | 108 |
musculoskeletal system | 1.02e-25 | 167 |
lateral plate mesoderm | 1.92e-20 | 203 |
mesoderm | 1.13e-11 | 315 |
mesoderm-derived structure | 1.13e-11 | 315 |
presumptive mesoderm | 1.13e-11 | 315 |
connective tissue | 2.55e-10 | 371 |
stroma of bone marrow | 1.53e-08 | 1 |