FFCP PHASE1:Hg19::chr11:104125387..104125399,+: Difference between revisions
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|id=chr11:104125387..104125399,+
|short_description=p@chr11:104125387..104125399,+
|description=CAGE_peak_at_chr11:104125387..104125399,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:104125387..104125399,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr11:104125387..104125399,+ | |||
|id=chr11:104125387..104125399,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000138;7.80e-07;6!CL:0002149;8.73e-07;6!CL:0002255;8.73e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,7.58e-07,6;CL:0000138,7.58e-07,6;CL:0002149,8.97e-07,6;CL:0002255,8.97e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!3.50e-14!1;DOID:4549!3.50e-14!1;DOID:5861!3.50e-14!1;DOID:6496!3.50e-14!1;DOID:3493!1.75e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3371;3.05e-34;1!DOID:4549;3.05e-34;1!DOID:5861;3.05e-34;1!DOID:6496;3.05e-34;1!DOID:1115;1.26e-15;20!DOID:201;7.80e-07;6!DOID:0060100;7.80e-07;6!DOID:3001;8.73e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.58e-34,1;DOID:4549,2.58e-34,1;DOID:5861,2.58e-34,1;DOID:6496,2.58e-34,1;DOID:1115,1.29e-15,20;DOID:201,7.58e-07,6;DOID:0060100,7.58e-07,6;DOID:3001,8.97e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001905!2.16e-26!2;UBERON:0002757!2.16e-26!2;UBERON:0010134!2.16e-26!2;UBERON:0002784!2.16e-26!2;UBERON:0005408!2.16e-26!2;UBERON:0001899!2.16e-26!2;UBERON:0003296!1.04e-13!4;UBERON:0010133!1.04e-13!4;UBERON:0001894!3.21e-08!7;UBERON:0006222!3.21e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.84e-66;2!UBERON:0002757;2.84e-66;2!UBERON:0010134;2.84e-66;2!UBERON:0005408;2.84e-66;2!UBERON:0001899;2.84e-66;2!UBERON:0003296;8.36e-34;4!UBERON:0010133;8.36e-34;4!UBERON:0002784;8.36e-34;4!UBERON:0001894;7.84e-20;7!UBERON:0002418;2.19e-12;3!UBERON:0004755;2.19e-12;3!UBERON:0002369;2.74e-12;3!UBERON:0001235;2.74e-12;3!UBERON:0006858;2.74e-12;3!UBERON:0002368;1.57e-08;33!UBERON:0000949;3.20e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.84e-66,2;UBERON:0002757,2.84e-66,2;UBERON:0010134,2.84e-66,2;UBERON:0005408,2.84e-66,2;UBERON:0001899,2.84e-66,2;UBERON:0003296,8.36e-34,4;UBERON:0010133,8.36e-34,4;UBERON:0002784,8.36e-34,4;UBERON:0001894,7.84e-20,7;UBERON:0006222,7.84e-20,7;UBERON:0002418,2.07e-12,3;UBERON:0004755,2.07e-12,3;UBERON:0002369,2.59e-12,3;UBERON:0001235,2.59e-12,3;UBERON:0006858,2.59e-12,3;UBERON:0002368,3.06e-09,35;UBERON:0000949,2.44e-07,45 | |||
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|short_description=p@chr11:104125387..104125399,+ | |||
}} | }} |
Latest revision as of 17:37, 23 July 2015
Short description: | p@chr11:104125387..104125399, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:104125387..104125399, + |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.58e-07 | 6 |
chondrocyte | 7.58e-07 | 6 |
epithelial cell of uterus | 8.97e-07 | 6 |
stromal cell of endometrium | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.84e-66 | 2 |
regional part of epithalamus | 2.84e-66 | 2 |
secretory circumventricular organ | 2.84e-66 | 2 |
circumventricular organ | 2.84e-66 | 2 |
epithalamus | 2.84e-66 | 2 |
gland of diencephalon | 8.36e-34 | 4 |
neuroendocrine gland | 8.36e-34 | 4 |
regional part of diencephalon | 8.36e-34 | 4 |
diencephalon | 7.84e-20 | 7 |
future diencephalon | 7.84e-20 | 7 |
cartilage tissue | 2.07e-12 | 3 |
skeletal tissue | 2.07e-12 | 3 |
adrenal gland | 2.59e-12 | 3 |
adrenal cortex | 2.59e-12 | 3 |
adrenal/interrenal gland | 2.59e-12 | 3 |
endocrine gland | 3.06e-09 | 35 |
endocrine system | 2.44e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.58e-34 | 1 |
extraosseous chondrosarcoma | 2.58e-34 | 1 |
myxoid chondrosarcoma | 2.58e-34 | 1 |
extraskeletal myxoid chondrosarcoma | 2.58e-34 | 1 |
sarcoma | 1.29e-15 | 20 |
connective tissue cancer | 7.58e-07 | 6 |
musculoskeletal system cancer | 7.58e-07 | 6 |
female reproductive endometrioid cancer | 8.97e-07 | 6 |