FFCP PHASE1:Hg19::chr11:47378460..47378498,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:47378460..47378498,+ | |||
|coexpression_cluster_id=C192 | |||
|description=CAGE_peak_at_chr11:47378460..47378498,+ | |||
|id=chr11:47378460..47378498,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.68e-45!42;CL:0000860!2.92e-41!45;CL:0000763!1.50e-38!112;CL:0000049!1.50e-38!112;CL:0002009!4.26e-36!65;CL:0002194!6.78e-36!63;CL:0000576!6.78e-36!63;CL:0000040!6.78e-36!63;CL:0000559!6.78e-36!63;CL:0000766!1.11e-33!76;CL:0000557!1.17e-31!71;CL:0000839!1.07e-30!70;CL:0000037!1.47e-30!172;CL:0000566!1.47e-30!172;CL:0002032!3.03e-29!165;CL:0000837!3.03e-29!165;CL:0000988!1.82e-27!182;CL:0000738!1.46e-25!140;CL:0002087!6.21e-25!119;CL:0002031!8.47e-20!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.00e-70;33!CL:0002057;2.00e-70;33!CL:0000473;1.25e-53;39!CL:0000234;1.25e-53;39!CL:0000576;3.02e-41;48!CL:0000766;6.18e-28;69!CL:0000763;7.41e-18;100!CL:0000775;1.17e-12;3!CL:0002087;3.02e-12;104!CL:0000226;7.78e-12;3!CL:0000842;7.78e-12;3!CL:0000738;1.87e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.01e-74,42;CL:0002057,2.01e-74,42;CL:0000473,1.05e-68,48;CL:0000234,1.05e-68,48;CL:0002194,2.26e-53,59;CL:0000576,2.26e-53,59;CL:0000040,2.26e-53,59;CL:0000559,2.26e-53,59;CL:0000766,2.57e-52,72;CL:0002009,2.15e-51,61;CL:0000763,8.74e-49,108;CL:0000049,8.74e-49,108;CL:0000839,5.76e-47,66;CL:0000557,3.70e-46,67;CL:0000037,4.66e-37,168;CL:0000988,1.15e-34,177;CL:0002087,1.27e-33,115;CL:0002032,3.23e-33,161;CL:0000837,3.23e-33,161;CL:0000738,4.95e-33,136;CL:0002031,5.59e-26,120;CL:0000775,1.40e-12,3;CL:0000134,3.01e-12,354;CL:0002320,8.19e-12,361;CL:0000226,8.55e-12,3;CL:0000842,8.55e-12,3;CL:0000219,2.79e-10,386;CL:0000048,4.09e-09,427;CL:0000723,7.61e-09,433;CL:0000034,1.70e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.50e-54;42!CL:0000049;2.17e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.48e-36!102;UBERON:0003061!4.48e-36!102;UBERON:0002193!2.77e-32!112;UBERON:0002371!1.73e-27!80;UBERON:0001474!1.94e-24!86;UBERON:0004765!1.63e-19!101;UBERON:0001434!1.63e-19!101;UBERON:0002405!1.41e-17!115;UBERON:0007023!1.76e-15!115;UBERON:0003081!2.11e-10!216;UBERON:0000178!5.79e-10!15;UBERON:0000179!5.79e-10!15;UBERON:0000463!5.79e-10!15;UBERON:0001049!2.76e-09!57;UBERON:0005068!2.76e-09!57;UBERON:0006241!2.76e-09!57;UBERON:0007135!2.76e-09!57;UBERON:0002780!6.97e-08!41;UBERON:0001890!6.97e-08!41;UBERON:0006240!6.97e-08!41;UBERON:0002616!7.33e-08!59;UBERON:0002204!9.12e-08!167;UBERON:0003080!1.43e-07!42;UBERON:0002020!2.10e-07!34;UBERON:0003528!2.10e-07!34;UBERON:0002346!7.67e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.22e-14;15!UBERON:0000179;2.22e-14;15!UBERON:0000463;2.22e-14;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.40e-49,98;UBERON:0003061,6.40e-49,98;UBERON:0002193,1.42e-43,108;UBERON:0002371,7.76e-40,76;UBERON:0001474,2.19e-36,82;UBERON:0004765,1.71e-32,90;UBERON:0002405,3.32e-31,93;UBERON:0001434,1.69e-28,100;UBERON:0003081,2.98e-20,203;UBERON:0002204,2.90e-15,167;UBERON:0000178,2.65e-14,15;UBERON:0000179,2.65e-14,15;UBERON:0000463,2.65e-14,15;UBERON:0002384,3.21e-11,371;UBERON:0000926,8.66e-10,315;UBERON:0004120,8.66e-10,315;UBERON:0006603,8.66e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,0,0,0.309632246632152,0,0,0,0.0774672005803016,0.426507697462265,0,1.66198622559563,27.6751337508796,20.1820109765742,0,0,0.257575567634187,5.37973483484389,2.64513160582167,1.94067248950253,5.34586784883075,5.75635043230556,4.33588919253145,5.46615545412086,3.33008918487831,0.47296445977717,2.41321976515633,1.29096936716765,2.70852973188684,5.64727018627814,4.91231070104122,0,7.95818120164347,0.641858054152187,5.11469700639233,2.96866170168044,2.19410023383795,2.13112375266347,10.447532590629,4.53908179752912,2.4912889959823,4.27122730936464,9.38669253156363,0.434377689410233,5.44859552370032,1.47311054395026,0.632924774881769,0,0.212604299965044,0,1.34794357375794,1.50176892841506,0.803627933485401,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.361439152384566,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0.348259474598534,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0.591092280605782,0,1.54011643535698,0.254094624222463,0,0,0,0,11.9841123831549,35.899375104483,2.07207756718018,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,1.03384013061444,6.47142602455851,2.77491650288955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,2.29391162142713,7.40541343326411,0.714695326373367,0.822724546172388,1.29694662238543,1.62009431171434,0.79312517629427,0,0,0,0.371606350251437,0.28853842595289,0,0,0.399158742865633,0,0.635020748171649,0,1.12318871245384,2.05411211129873,1.09675927041116,0,1.18504244461122,3.53293765228139,2.01799707191048,0.851692475380653,1.37402137902306,0,0,0,0.976940477010201,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.723578631752448,0,0.331737779793674,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0.202203398942031,0,0,1.82454789215666,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0.182248669974074,0,0.0788057072991982,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0.903017728242729,0,0,0,0,0.517131825446202,0.26446520348538,0,0,0,0.157204305099666,1.24271716604159,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0.443716206147409,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0.389720617678777,0.398594520940089,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0.127894371303652,0,0.157265941855896,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0.192687675289379,0,0.478901577171454,0,0,0.207471757392654,0.484426936895553,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,1.56215619722769,0.620060389503552,0.126831620387814,0,0,0.496211178389294,0,0,0.535701835878287,0.336283722218824,0.606965604236632,0,0,0,0,0,0.131545547125698,0,0.111231401892069,0.078493092850514,0.785577949580009,0,0,0,0,0.285906176706625,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0.11294608203896,0,0,0,0.218559560503957,0,0.245148321753905,0,0.785233868459781,0,0,0,0,0.0644578879735772,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.0757786982182394,0.267964130156178,0,0.310298987585686,0,0.23806443146374,0,0.124149428591716,0,0,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:47378460..47378498,+ | |||
}} |
Latest revision as of 22:35, 23 July 2015
Short description: | p@chr11:47378460..47378498, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:47378460..47378498, + |
Coexpression cluster: | C192_Neutrophils_CD14_Peripheral_Eosinophils_CD8_Natural_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.01e-74 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.01e-74 | 42 |
defensive cell | 1.05e-68 | 48 |
phagocyte | 1.05e-68 | 48 |
monopoietic cell | 2.26e-53 | 59 |
monocyte | 2.26e-53 | 59 |
monoblast | 2.26e-53 | 59 |
promonocyte | 2.26e-53 | 59 |
myeloid leukocyte | 2.57e-52 | 72 |
macrophage dendritic cell progenitor | 2.15e-51 | 61 |
myeloid cell | 8.74e-49 | 108 |
common myeloid progenitor | 8.74e-49 | 108 |
myeloid lineage restricted progenitor cell | 5.76e-47 | 66 |
granulocyte monocyte progenitor cell | 3.70e-46 | 67 |
hematopoietic stem cell | 4.66e-37 | 168 |
hematopoietic cell | 1.15e-34 | 177 |
nongranular leukocyte | 1.27e-33 | 115 |
hematopoietic oligopotent progenitor cell | 3.23e-33 | 161 |
hematopoietic multipotent progenitor cell | 3.23e-33 | 161 |
leukocyte | 4.95e-33 | 136 |
hematopoietic lineage restricted progenitor cell | 5.59e-26 | 120 |
neutrophil | 1.40e-12 | 3 |
mesenchymal cell | 3.01e-12 | 354 |
connective tissue cell | 8.19e-12 | 361 |
single nucleate cell | 8.55e-12 | 3 |
mononuclear cell | 8.55e-12 | 3 |
motile cell | 2.79e-10 | 386 |
multi fate stem cell | 4.09e-09 | 427 |
somatic stem cell | 7.61e-09 | 433 |
stem cell | 1.70e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.40e-49 | 98 |
blood island | 6.40e-49 | 98 |
hemolymphoid system | 1.42e-43 | 108 |
bone marrow | 7.76e-40 | 76 |
bone element | 2.19e-36 | 82 |
skeletal element | 1.71e-32 | 90 |
immune system | 3.32e-31 | 93 |
skeletal system | 1.69e-28 | 100 |
lateral plate mesoderm | 2.98e-20 | 203 |
musculoskeletal system | 2.90e-15 | 167 |
blood | 2.65e-14 | 15 |
haemolymphatic fluid | 2.65e-14 | 15 |
organism substance | 2.65e-14 | 15 |
connective tissue | 3.21e-11 | 371 |
mesoderm | 8.66e-10 | 315 |
mesoderm-derived structure | 8.66e-10 | 315 |
presumptive mesoderm | 8.66e-10 | 315 |