FFCP PHASE1:Hg19::chr12:10725588..10725591,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:10725588..10725591,+ | |||
|coexpression_cluster_id=C121 | |||
|description=CAGE_peak_at_chr12:10725588..10725591,+ | |description=CAGE_peak_at_chr12:10725588..10725591,+ | ||
|id=chr12:10725588..10725591,+ | |id=chr12:10725588..10725591,+ | ||
|ontology_enrichment_celltype=CL:0000625!1.58e-21!11;CL:0000791!6.93e-15!18;CL:0000789!6.93e-15!18;CL:0002420!6.93e-15!18;CL:0002419!6.93e-15!18;CL:0000790!6.93e-15!18;CL:0000838!3.70e-14!52;CL:0000542!8.85e-14!53;CL:0000051!8.85e-14!53;CL:0000738!5.37e-12!140;CL:0000084!1.40e-11!25;CL:0000827!1.40e-11!25;CL:0002087!7.13e-11!119;CL:0000037!4.57e-10!172;CL:0000566!4.57e-10!172;CL:0002031!7.34e-10!124;CL:0000988!1.15e-09!182;CL:0002032!1.45e-08!165;CL:0000837!1.45e-08!165;CL:0000842!5.08e-08!3;CL:0000623!5.20e-08!3;CL:0000825!5.20e-08!3 | |ontology_enrichment_celltype=CL:0000625!1.58e-21!11;CL:0000791!6.93e-15!18;CL:0000789!6.93e-15!18;CL:0002420!6.93e-15!18;CL:0002419!6.93e-15!18;CL:0000790!6.93e-15!18;CL:0000838!3.70e-14!52;CL:0000542!8.85e-14!53;CL:0000051!8.85e-14!53;CL:0000738!5.37e-12!140;CL:0000084!1.40e-11!25;CL:0000827!1.40e-11!25;CL:0002087!7.13e-11!119;CL:0000037!4.57e-10!172;CL:0000566!4.57e-10!172;CL:0002031!7.34e-10!124;CL:0000988!1.15e-09!182;CL:0002032!1.45e-08!165;CL:0000837!1.45e-08!165;CL:0000842!5.08e-08!3;CL:0000623!5.20e-08!3;CL:0000825!5.20e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.07e-68;11!CL:0000791;2.21e-50;18!CL:0000789;2.21e-50;18!CL:0002419;2.21e-50;18!CL:0000084;8.86e-36;25!CL:0000542;1.00e-13;53!CL:0000226;2.38e-11;3!CL:0000842;2.38e-11;3!CL:0000623;6.32e-11;3!CL:0002127;1.60e-09;1!CL:0000911;1.60e-09;1!CL:0000814;1.60e-09;1!CL:0002379;1.74e-09;1!CL:0000785;3.87e-09;1!CL:0000819;3.87e-09;1!CL:0002087;7.67e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,5.65e-69,11;CL:0000791,1.45e-50,18;CL:0000789,1.45e-50,18;CL:0002420,1.45e-50,18;CL:0002419,1.45e-50,18;CL:0000790,1.45e-50,18;CL:0000084,6.55e-36,25;CL:0000827,6.55e-36,25;CL:0000838,9.59e-27,52;CL:0000542,3.42e-26,53;CL:0000051,3.42e-26,53;CL:0002087,3.75e-16,115;CL:0000738,5.24e-15,136;CL:0002031,1.20e-11,120;CL:0000037,1.55e-11,168;CL:0000226,3.42e-11,3;CL:0000842,3.42e-11,3;CL:0000623,4.20e-11,3;CL:0000825,4.20e-11,3;CL:0000988,8.78e-11,177;CL:0002127,1.60e-09,1;CL:0000914,1.60e-09,1;CL:0000911,1.60e-09,1;CL:0000814,1.60e-09,1;CL:0002042,1.60e-09,1;CL:0002039,1.60e-09,1;CL:0002040,1.60e-09,1;CL:0002041,1.60e-09,1;CL:0002379,1.74e-09,1;CL:0002032,2.77e-09,161;CL:0000837,2.77e-09,161;CL:0000819,3.05e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000790;2.21e-50;18!CL:0000051;1.00e-13;53!UBERON:0005425;8.16e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3620;1.74e-09;1!DOID:3565;1.74e-09;1!DOID:0060073;3.87e-09;1!DOID:8675;3.87e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.74e-09,1;DOID:3565,1.74e-09,1;DOID:0060073,3.05e-09,1;DOID:8675,3.05e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!7.90e-07!15;UBERON:0000179!7.90e-07!15;UBERON:0000463!7.90e-07!15 | |ontology_enrichment_uberon=UBERON:0000178!7.90e-07!15;UBERON:0000179!7.90e-07!15;UBERON:0000463!7.90e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.21e-09;1!UBERON:0000941;8.16e-09;1!UBERON:0001785;8.16e-09;1!UBERON:0002464;8.16e-09;1!UBERON:0004904;8.16e-09;1!UBERON:0001021;8.16e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.22e-09,1;UBERON:0000941,7.27e-09,1;UBERON:0001785,7.27e-09,1;UBERON:0002464,7.27e-09,1;UBERON:0004904,7.27e-09,1;UBERON:0001021,7.27e-09,1;UBERON:0003902,7.27e-09,1;UBERON:0005425,7.27e-09,1 | |||
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| ||
|short_description=p@chr12:10725588..10725591,+ | |short_description=p@chr12:10725588..10725591,+ | ||
}} | }} |
Latest revision as of 04:30, 24 July 2015
Short description: | p@chr12:10725588..10725591, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:10725588..10725591, + |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 2.22e-09 | 1 |
cranial nerve II | 7.27e-09 | 1 |
cranial nerve | 7.27e-09 | 1 |
nerve trunk | 7.27e-09 | 1 |
nerve connecting eye with brain | 7.27e-09 | 1 |
nerve | 7.27e-09 | 1 |
retinal neural layer | 7.27e-09 | 1 |
presumptive neural retina | 7.27e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.74e-09 | 1 |
meningioma | 1.74e-09 | 1 |
lymphatic system cancer | 3.05e-09 | 1 |
lymphosarcoma | 3.05e-09 | 1 |