FFCP PHASE1:Hg19::chr12:111537749..111537758,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:111537749..111537758,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_at_chr12:111537749..111537758,+ | |description=CAGE_peak_at_chr12:111537749..111537758,+ | ||
|id=chr12:111537749..111537758,+ | |id=chr12:111537749..111537758,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!5.33e-76!22;UBERON:0001950!7.69e-73!20;UBERON:0001869!2.22e-67!32;UBERON:0000956!6.09e-67!25;UBERON:0000203!6.09e-67!25;UBERON:0001893!2.29e-63!34;UBERON:0002791!9.57e-58!33;UBERON:0002020!5.11e-56!34;UBERON:0003528!5.11e-56!34;UBERON:0002780!2.51e-52!41;UBERON:0001890!2.51e-52!41;UBERON:0006240!2.51e-52!41;UBERON:0003080!4.82e-51!42;UBERON:0005743!1.49e-40!86;UBERON:0003056!9.01e-39!61;UBERON:0001017!1.01e-38!82;UBERON:0000955!1.10e-37!69;UBERON:0006238!1.10e-37!69;UBERON:0001049!4.36e-37!57;UBERON:0005068!4.36e-37!57;UBERON:0006241!4.36e-37!57;UBERON:0007135!4.36e-37!57;UBERON:0000073!1.82e-36!94;UBERON:0001016!1.82e-36!94;UBERON:0007023!1.87e-36!115;UBERON:0002616!9.43e-36!59;UBERON:0003075!1.97e-33!86;UBERON:0007284!1.97e-33!86;UBERON:0000200!3.30e-33!6;UBERON:0002346!8.17e-32!90;UBERON:0001872!1.82e-26!5;UBERON:0000153!4.52e-26!129;UBERON:0007811!4.52e-26!129;UBERON:0000033!7.63e-25!123;UBERON:0004121!5.30e-19!169;UBERON:0000924!1.74e-18!173;UBERON:0006601!1.74e-18!173;UBERON:0001870!2.65e-17!2;UBERON:0002360!8.93e-17!2;UBERON:0000094!8.93e-17!2;UBERON:0007645!8.93e-17!2;UBERON:0001871!4.53e-16!7;UBERON:0002021!2.25e-15!5;UBERON:0000349!8.25e-15!5;UBERON:0002771!2.19e-11!3;UBERON:0002902!7.98e-10!1;UBERON:0009899!7.98e-10!1;UBERON:0002022!1.03e-09!1;UBERON:0002581!1.21e-09!1;UBERON:0002702!1.32e-09!1;UBERON:0001882!1.84e-09!1;UBERON:0005403!1.84e-09!1;UBERON:0007190!2.55e-09!1;UBERON:0003112!3.00e-09!1;UBERON:0000032!3.00e-09!1;UBERON:0005253!3.00e-09!1;UBERON:0003128!3.00e-09!1;UBERON:0002241!3.00e-09!1;UBERON:0001703!3.00e-09!1;UBERON:0004761!3.00e-09!1;UBERON:0009617!3.00e-09!1;UBERON:0002363!5.72e-09!1;UBERON:0007647!5.72e-09!1;UBERON:0010115!5.72e-09!1;UBERON:0000025!7.00e-09!194;UBERON:0000064!1.29e-08!219;UBERON:0000475!7.05e-07!365;UBERON:0000483!7.60e-07!309;UBERON:0000119!9.58e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002902;3.10e-50;1!UBERON:0002022;3.10e-50;1!UBERON:0009899;3.10e-50;1!UBERON:0002021;2.71e-40;5!UBERON:0001950;3.06e-38;20!UBERON:0002619;5.16e-35;22!UBERON:0000956;4.21e-31;25!UBERON:0000203;4.21e-31;25!UBERON:0001869;2.80e-20;32!UBERON:0001893;2.80e-20;34!UBERON:0003528;3.83e-19;34!UBERON:0002020;3.83e-19;34!UBERON:0002791;1.15e-18;32!UBERON:0000073;2.43e-12;53!UBERON:0002616;2.43e-12;53!UBERON:0002780;3.70e-12;41!UBERON:0001890;3.70e-12;41!UBERON:0001872;3.10e-11;5 | |||
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|short_description=p@chr12:111537749..111537758,+ | |short_description=p@chr12:111537749..111537758,+ | ||
}} | }} |
Latest revision as of 04:59, 24 July 2015
Short description: | p@chr12:111537749..111537758, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:111537749..111537758, + |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital pole | 1.46e-50 | 1 |
pole of cerebral hemisphere | 1.46e-50 | 1 |
insula | 6.58e-50 | 1 |
occipital lobe | 2.22e-40 | 5 |
neocortex | 3.06e-38 | 20 |
regional part of cerebral cortex | 5.16e-35 | 22 |
cerebral cortex | 4.21e-31 | 25 |
pallium | 4.21e-31 | 25 |
regional part of telencephalon | 9.87e-25 | 32 |
cerebral hemisphere | 9.87e-25 | 32 |
brain grey matter | 2.23e-23 | 34 |
gray matter | 2.23e-23 | 34 |
telencephalon | 2.23e-23 | 34 |
regional part of forebrain | 1.19e-19 | 41 |
forebrain | 1.19e-19 | 41 |
anterior neural tube | 1.19e-19 | 41 |
future forebrain | 1.19e-19 | 41 |
regional part of nervous system | 1.70e-15 | 53 |
regional part of brain | 1.70e-15 | 53 |
neural tube | 9.92e-15 | 56 |
neural rod | 9.92e-15 | 56 |
future spinal cord | 9.92e-15 | 56 |
neural keel | 9.92e-15 | 56 |
pre-chordal neural plate | 1.29e-13 | 61 |
brain | 3.68e-12 | 68 |
future brain | 3.68e-12 | 68 |
parietal lobe | 2.94e-11 | 5 |
central nervous system | 2.17e-10 | 81 |
neural plate | 2.17e-10 | 82 |
presumptive neural plate | 2.17e-10 | 82 |
neurectoderm | 5.98e-10 | 86 |
nervous system | 1.88e-09 | 89 |
ecto-epithelium | 2.22e-08 | 104 |
adult organism | 8.86e-08 | 114 |
structure with developmental contribution from neural crest | 8.99e-07 | 132 |