FFCP PHASE1:Hg19::chr12:111613164..111613168,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:111613164..111613168,+ | |||
|coexpression_cluster_id=C3239 | |||
|description=CAGE_peak_at_chr12:111613164..111613168,+ | |||
|id=chr12:111613164..111613168,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002623;2.71e-07;3!CL:0000182;5.47e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,2.97e-07,3;CL:0000182,5.31e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.97e-19;1!UBERON:0007297;2.60e-10;2 | |||
|ontology_enrichment_disease=DOID:171!3.36e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.67e-24!22;UBERON:0001950!1.76e-23!20;UBERON:0001869!2.34e-23!32;UBERON:0002780!5.96e-22!41;UBERON:0001890!5.96e-22!41;UBERON:0006240!5.96e-22!41;UBERON:0001893!9.40e-22!34;UBERON:0001049!9.91e-22!57;UBERON:0005068!9.91e-22!57;UBERON:0006241!9.91e-22!57;UBERON:0007135!9.91e-22!57;UBERON:0002020!1.12e-21!34;UBERON:0003528!1.12e-21!34;UBERON:0000073!1.14e-21!94;UBERON:0001016!1.14e-21!94;UBERON:0003080!2.57e-21!42;UBERON:0000956!3.10e-21!25;UBERON:0000203!3.10e-21!25;UBERON:0002616!8.57e-21!59;UBERON:0001017!1.00e-20!82;UBERON:0000955!3.78e-20!69;UBERON:0006238!3.78e-20!69;UBERON:0002791!6.48e-20!33;UBERON:0005743!1.96e-19!86;UBERON:0002346!6.39e-17!90;UBERON:0003075!4.51e-15!86;UBERON:0007284!4.51e-15!86;UBERON:0003056!7.44e-15!61;UBERON:0000924!8.00e-12!173;UBERON:0006601!8.00e-12!173;UBERON:0000033!1.24e-11!123;UBERON:0000200!2.46e-11!6;UBERON:0000153!8.91e-11!129;UBERON:0007811!8.91e-11!129;UBERON:0007023!1.61e-10!115;UBERON:0004121!1.71e-10!169;UBERON:0002021!8.77e-10!5;UBERON:0002771!5.85e-09!3;UBERON:0001896!6.73e-09!3;UBERON:0005290!6.73e-09!3;UBERON:0010096!6.73e-09!3;UBERON:0001871!8.48e-09!7;UBERON:0004111!6.10e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;2.97e-19;1!UBERON:0006868;2.97e-19;1!UBERON:0002021;2.51e-15;5!UBERON:0001950;4.09e-14;20!UBERON:0002619;6.40e-13;22!UBERON:0000956;1.80e-11;25!UBERON:0000203;1.80e-11;25!UBERON:0001905;2.60e-10;2!UBERON:0002757;2.60e-10;2!UBERON:0010134;2.60e-10;2!UBERON:0005408;2.60e-10;2!UBERON:0001899;2.60e-10;2!UBERON:0002791;2.40e-08;32!UBERON:0001869;4.08e-08;32!UBERON:0002780;7.81e-08;41!UBERON:0001890;7.81e-08;41!UBERON:0003528;9.99e-08;34!UBERON:0002020;9.99e-08;34!UBERON:0002114;2.71e-07;2!UBERON:0006947;2.71e-07;3!UBERON:0004054;2.71e-07;3!UBERON:0000922;5.32e-07;49!UBERON:0001893;6.19e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,2.25e-19,1;UBERON:0006868,2.25e-19,1;UBERON:0002021,3.35e-15,5;UBERON:0001950,4.16e-14,20;UBERON:0002619,6.50e-13,22;UBERON:0000956,1.83e-11,25;UBERON:0000203,1.83e-11,25;UBERON:0002780,8.36e-11,41;UBERON:0001890,8.36e-11,41;UBERON:0003080,8.36e-11,41;UBERON:0006240,8.36e-11,41;UBERON:0001905,3.27e-10,2;UBERON:0002757,3.27e-10,2;UBERON:0010134,3.27e-10,2;UBERON:0005408,3.27e-10,2;UBERON:0001899,3.27e-10,2;UBERON:0002791,4.24e-09,32;UBERON:0001869,4.24e-09,32;UBERON:0003528,1.35e-08,34;UBERON:0002020,1.35e-08,34;UBERON:0001893,1.35e-08,34;UBERON:0000073,2.05e-08,53;UBERON:0002616,2.05e-08,53;UBERON:0001049,5.68e-08,56;UBERON:0005068,5.68e-08,56;UBERON:0006241,5.68e-08,56;UBERON:0007135,5.68e-08,56;UBERON:0002530,1.06e-07,59;UBERON:0002114,2.32e-07,2;UBERON:0006947,2.47e-07,3;UBERON:0004054,2.47e-07,3;UBERON:0003056,2.49e-07,61 | |||
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| ||
|short_description=p@chr12:111613164..111613168,+ | |||
}} | }} |
Latest revision as of 04:59, 24 July 2015
Short description: | p@chr12:111613164..111613168, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:111613164..111613168, + |
Coexpression cluster: | C3239_parietal_Small_brain_salivary_temporal_occipital_duodenum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 2.97e-07 | 3 |
hepatocyte | 5.31e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 2.25e-19 | 1 |
seminal fluid secreting gland | 2.25e-19 | 1 |
occipital lobe | 3.35e-15 | 5 |
neocortex | 4.16e-14 | 20 |
regional part of cerebral cortex | 6.50e-13 | 22 |
cerebral cortex | 1.83e-11 | 25 |
pallium | 1.83e-11 | 25 |
regional part of forebrain | 8.36e-11 | 41 |
forebrain | 8.36e-11 | 41 |
anterior neural tube | 8.36e-11 | 41 |
future forebrain | 8.36e-11 | 41 |
pineal body | 3.27e-10 | 2 |
regional part of epithalamus | 3.27e-10 | 2 |
secretory circumventricular organ | 3.27e-10 | 2 |
circumventricular organ | 3.27e-10 | 2 |
epithalamus | 3.27e-10 | 2 |
regional part of telencephalon | 4.24e-09 | 32 |
cerebral hemisphere | 4.24e-09 | 32 |
brain grey matter | 1.35e-08 | 34 |
gray matter | 1.35e-08 | 34 |
telencephalon | 1.35e-08 | 34 |
regional part of nervous system | 2.05e-08 | 53 |
regional part of brain | 2.05e-08 | 53 |
neural tube | 5.68e-08 | 56 |
neural rod | 5.68e-08 | 56 |
future spinal cord | 5.68e-08 | 56 |
neural keel | 5.68e-08 | 56 |
gland | 1.06e-07 | 59 |
duodenum | 2.32e-07 | 2 |
male genital duct | 2.47e-07 | 3 |
internal male genitalia | 2.47e-07 | 3 |
pre-chordal neural plate | 2.49e-07 | 61 |