FFCP PHASE1:Hg19::chr12:113827227..113827411,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:113827227..113827411,+ | |||
|coexpression_cluster_id=C660 | |coexpression_cluster_id=C660 | ||
|description=CAGE_peak_at_chr12:113827227..113827411,+ | |description=CAGE_peak_at_chr12:113827227..113827411,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000057!2.75e-08!75;CL:0000055!2.00e-07!180 | |ontology_enrichment_celltype=CL:0000057!2.75e-08!75;CL:0000055!2.00e-07!180 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.36e-08,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.83e-13!57;UBERON:0005068!7.83e-13!57;UBERON:0006241!7.83e-13!57;UBERON:0007135!7.83e-13!57;UBERON:0002616!1.39e-11!59;UBERON:0003080!8.52e-11!42;UBERON:0002780!1.49e-10!41;UBERON:0001890!1.49e-10!41;UBERON:0006240!1.49e-10!41;UBERON:0000955!9.39e-10!69;UBERON:0006238!9.39e-10!69;UBERON:0003075!2.93e-09!86;UBERON:0007284!2.93e-09!86;UBERON:0000468!3.15e-09!659;UBERON:0005743!3.31e-09!86;UBERON:0001017!3.46e-09!82;UBERON:0000062!9.76e-09!511;UBERON:0002346!1.22e-08!90;UBERON:0002020!2.49e-08!34;UBERON:0003528!2.49e-08!34;UBERON:0000475!2.74e-08!365;UBERON:0003056!5.78e-08!61;UBERON:0000073!1.22e-07!94;UBERON:0001016!1.22e-07!94;UBERON:0002791!1.68e-07!33;UBERON:0001893!2.00e-07!34;UBERON:0000033!4.18e-07!123;UBERON:0000480!4.73e-07!626;UBERON:0001869!5.22e-07!32;UBERON:0000467!6.10e-07!625 | |ontology_enrichment_uberon=UBERON:0001049!7.83e-13!57;UBERON:0005068!7.83e-13!57;UBERON:0006241!7.83e-13!57;UBERON:0007135!7.83e-13!57;UBERON:0002616!1.39e-11!59;UBERON:0003080!8.52e-11!42;UBERON:0002780!1.49e-10!41;UBERON:0001890!1.49e-10!41;UBERON:0006240!1.49e-10!41;UBERON:0000955!9.39e-10!69;UBERON:0006238!9.39e-10!69;UBERON:0003075!2.93e-09!86;UBERON:0007284!2.93e-09!86;UBERON:0000468!3.15e-09!659;UBERON:0005743!3.31e-09!86;UBERON:0001017!3.46e-09!82;UBERON:0000062!9.76e-09!511;UBERON:0002346!1.22e-08!90;UBERON:0002020!2.49e-08!34;UBERON:0003528!2.49e-08!34;UBERON:0000475!2.74e-08!365;UBERON:0003056!5.78e-08!61;UBERON:0000073!1.22e-07!94;UBERON:0001016!1.22e-07!94;UBERON:0002791!1.68e-07!33;UBERON:0001893!2.00e-07!34;UBERON:0000033!4.18e-07!123;UBERON:0000480!4.73e-07!626;UBERON:0001869!5.22e-07!32;UBERON:0000467!6.10e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.25e-08;41!UBERON:0001890;8.25e-08;41!UBERON:0003528;3.27e-07;34!UBERON:0002020;3.27e-07;34!UBERON:0000073;5.26e-07;53!UBERON:0002616;5.26e-07;53!UBERON:0002791;8.14e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0002780;8.25e-08;41!UBERON:0001890;8.25e-08;41!UBERON:0003528;3.27e-07;34!UBERON:0002020;3.27e-07;34!UBERON:0000073;5.26e-07;53!UBERON:0002616;5.26e-07;53!UBERON:0002791;8.14e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.27e-12,56;UBERON:0005068,1.27e-12,56;UBERON:0006241,1.27e-12,56;UBERON:0007135,1.27e-12,56;UBERON:0000073,6.68e-12,53;UBERON:0002616,6.68e-12,53;UBERON:0002780,1.39e-10,41;UBERON:0001890,1.39e-10,41;UBERON:0003080,1.39e-10,41;UBERON:0006240,1.39e-10,41;UBERON:0003075,2.01e-10,82;UBERON:0007284,2.01e-10,82;UBERON:0002346,1.04e-09,86;UBERON:0000955,1.58e-09,68;UBERON:0006238,1.58e-09,68;UBERON:0010371,2.25e-09,104;UBERON:0001017,6.11e-09,81;UBERON:0003528,2.36e-08,34;UBERON:0002020,2.36e-08,34;UBERON:0003056,4.96e-08,61;UBERON:0010314,9.10e-08,132;UBERON:0001893,1.91e-07,34;UBERON:0002791,1.95e-07,32;UBERON:0001016,2.79e-07,89;UBERON:0001869,5.00e-07,32 | |||
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| ||
|short_description=p@chr12:113827227..113827411,+ | |short_description=p@chr12:113827227..113827411,+ | ||
}} | }} |
Latest revision as of 05:13, 24 July 2015
Short description: | p@chr12:113827227..113827411, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:113827227..113827411, + |
Coexpression cluster: | C660_Monocytederived_liposarcoma_Smooth_Synoviocyte_pituitary_Chondrocyte_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.36e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.27e-12 | 56 |
neural rod | 1.27e-12 | 56 |
future spinal cord | 1.27e-12 | 56 |
neural keel | 1.27e-12 | 56 |
regional part of nervous system | 6.68e-12 | 53 |
regional part of brain | 6.68e-12 | 53 |
regional part of forebrain | 1.39e-10 | 41 |
forebrain | 1.39e-10 | 41 |
anterior neural tube | 1.39e-10 | 41 |
future forebrain | 1.39e-10 | 41 |
neural plate | 2.01e-10 | 82 |
presumptive neural plate | 2.01e-10 | 82 |
neurectoderm | 1.04e-09 | 86 |
brain | 1.58e-09 | 68 |
future brain | 1.58e-09 | 68 |
ecto-epithelium | 2.25e-09 | 104 |
central nervous system | 6.11e-09 | 81 |
brain grey matter | 2.36e-08 | 34 |
gray matter | 2.36e-08 | 34 |
pre-chordal neural plate | 4.96e-08 | 61 |
structure with developmental contribution from neural crest | 9.10e-08 | 132 |
telencephalon | 1.91e-07 | 34 |
regional part of telencephalon | 1.95e-07 | 32 |
nervous system | 2.79e-07 | 89 |
cerebral hemisphere | 5.00e-07 | 32 |