FFCP PHASE1:Hg19::chr12:28126393..28126427,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:28126393..28126427,- | |||
|coexpression_cluster_id=C362 | |coexpression_cluster_id=C362 | ||
|description=CAGE_peak_at_chr12:28126393..28126427,- | |description=CAGE_peak_at_chr12:28126393..28126427,- | ||
|id=chr12:28126393..28126427,- | |id=chr12:28126393..28126427,- | ||
|ontology_enrichment_celltype=CL:0002368!3.38e-27!13;CL:0002076!8.05e-27!43;CL:0000223!3.14e-18!59;CL:0000244!2.67e-16!4;CL:0000731!2.67e-16!4;CL:0002202!8.17e-15!9;CL:0002632!8.17e-15!9;CL:0000066!3.54e-14!254;CL:0002159!1.46e-13!13;CL:0002166!2.56e-12!3;CL:0002328!3.33e-12!3;CL:0000068!4.16e-12!3;CL:0000069!4.16e-12!3;CL:0000307!4.16e-12!3;CL:0000377!4.16e-12!3;CL:0002621!8.42e-12!3;CL:0000317!1.03e-08!2;CL:1000448!1.03e-08!2;CL:0002308!1.03e-08!2;CL:0002140!1.03e-08!2;CL:0002251!7.44e-08!21;CL:0002077!1.24e-07!33 | |ontology_enrichment_celltype=CL:0002368!3.38e-27!13;CL:0002076!8.05e-27!43;CL:0000223!3.14e-18!59;CL:0000244!2.67e-16!4;CL:0000731!2.67e-16!4;CL:0002202!8.17e-15!9;CL:0002632!8.17e-15!9;CL:0000066!3.54e-14!254;CL:0002159!1.46e-13!13;CL:0002166!2.56e-12!3;CL:0002328!3.33e-12!3;CL:0000068!4.16e-12!3;CL:0000069!4.16e-12!3;CL:0000307!4.16e-12!3;CL:0000377!4.16e-12!3;CL:0002621!8.42e-12!3;CL:0000317!1.03e-08!2;CL:1000448!1.03e-08!2;CL:0002308!1.03e-08!2;CL:0002140!1.03e-08!2;CL:0002251!7.44e-08!21;CL:0002077!1.24e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.50e-36;13!CL:0000244;9.33e-32;4!CL:0000731;9.33e-32;4!CL:0002202;4.80e-30;9!CL:0002632;4.80e-30;9!CL:0002328;1.41e-23;3!CL:0000307;1.85e-23;3!CL:0002076;2.62e-22;42!CL:0000317;5.54e-16;2!CL:1000448;5.54e-16;2!CL:0002308;5.54e-16;2!CL:0002140;5.54e-16;2!CL:0002159;1.15e-13;14!CL:0002166;1.74e-11;3!CL:0002336;7.55e-09;1!CL:0002261;7.55e-09;1!CL:0002252;7.55e-09;1!CL:0002170;7.55e-09;1!CL:0000362;3.46e-08;9!CL:0000622;6.37e-07;5!CL:0000082;9.88e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.90e-36,13;CL:0000244,7.10e-32,4;CL:0000731,7.10e-32,4;CL:0002202,8.64e-30,9;CL:0002632,8.64e-30,9;CL:0002076,2.70e-28,42;CL:0002328,2.01e-23,3;CL:0000068,3.18e-23,3;CL:0000069,3.18e-23,3;CL:0000307,3.18e-23,3;CL:0000377,3.18e-23,3;CL:0000223,7.38e-20,58;CL:0000317,2.99e-16,2;CL:1000448,2.99e-16,2;CL:0002308,2.99e-16,2;CL:0002140,2.99e-16,2;CL:0002159,9.50e-14,14;CL:0000066,1.19e-13,253;CL:0002166,1.66e-11,3;CL:0002252,5.75e-09,1;CL:0002336,7.27e-09,1;CL:0002261,7.27e-09,1;CL:0002170,7.27e-09,1;CL:0000362,2.98e-08,9;CL:0002077,9.99e-08,34;CL:0002321,1.65e-07,250;CL:0000622,5.00e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000377;1.85e-23;3!CL:0000223;8.83e-11;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;7.55e-09;1!DOID:1357;7.55e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,8.49e-09,1;DOID:1357,8.49e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000365!1.73e-19!5;UBERON:0005910!3.48e-16!6;UBERON:0004119!2.15e-14!169;UBERON:0000925!2.15e-14!169;UBERON:0006595!2.15e-14!169;UBERON:0001004!6.71e-14!72;UBERON:0004815!3.33e-12!3;UBERON:0002031!3.33e-12!3;UBERON:0001949!8.42e-12!3;UBERON:0000065!1.89e-10!53;UBERON:0001708!2.44e-09!4;UBERON:0001704!2.44e-09!4;UBERON:0007196!2.88e-09!14;UBERON:0001558!2.88e-09!14;UBERON:0002185!2.96e-09!4;UBERON:0005911!4.40e-09!82;UBERON:0002419!1.03e-08!2;UBERON:0007771!1.03e-08!2;UBERON:0003297!1.03e-08!2;UBERON:0001821!1.03e-08!2;UBERON:0003487!1.03e-08!2;UBERON:0001820!1.03e-08!2;UBERON:0005089!1.03e-08!2;UBERON:0005088!1.03e-08!2;UBERON:0000161!1.95e-08!35;UBERON:0001007!1.30e-07!155;UBERON:0001555!1.30e-07!155;UBERON:0007026!1.30e-07!155;UBERON:0005178!2.08e-07!34;UBERON:0002224!2.08e-07!34;UBERON:0005181!3.77e-07!35 | |ontology_enrichment_uberon=UBERON:0000365!1.73e-19!5;UBERON:0005910!3.48e-16!6;UBERON:0004119!2.15e-14!169;UBERON:0000925!2.15e-14!169;UBERON:0006595!2.15e-14!169;UBERON:0001004!6.71e-14!72;UBERON:0004815!3.33e-12!3;UBERON:0002031!3.33e-12!3;UBERON:0001949!8.42e-12!3;UBERON:0000065!1.89e-10!53;UBERON:0001708!2.44e-09!4;UBERON:0001704!2.44e-09!4;UBERON:0007196!2.88e-09!14;UBERON:0001558!2.88e-09!14;UBERON:0002185!2.96e-09!4;UBERON:0005911!4.40e-09!82;UBERON:0002419!1.03e-08!2;UBERON:0007771!1.03e-08!2;UBERON:0003297!1.03e-08!2;UBERON:0001821!1.03e-08!2;UBERON:0003487!1.03e-08!2;UBERON:0001820!1.03e-08!2;UBERON:0005089!1.03e-08!2;UBERON:0005088!1.03e-08!2;UBERON:0000161!1.95e-08!35;UBERON:0001007!1.30e-07!155;UBERON:0001555!1.30e-07!155;UBERON:0007026!1.30e-07!155;UBERON:0005178!2.08e-07!34;UBERON:0002224!2.08e-07!34;UBERON:0005181!3.77e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.81e-25;5!UBERON:0004815;1.41e-23;3!UBERON:0002031;1.41e-23;3!UBERON:0005910;2.85e-21;6!UBERON:0007196;7.11e-18;15!UBERON:0001558;7.11e-18;15!UBERON:0000486;2.32e-16;12!UBERON:0002419;5.54e-16;2!UBERON:0007771;5.54e-16;2!UBERON:0003297;5.54e-16;2!UBERON:0001821;5.54e-16;2!UBERON:0003487;5.54e-16;2!UBERON:0001820;5.54e-16;2!UBERON:0002185;2.15e-14;5!UBERON:0005178;2.40e-13;34!UBERON:0002224;2.40e-13;34!UBERON:0005911;4.19e-13;36!UBERON:0005181;3.20e-12;35!UBERON:0000485;1.95e-10;7!UBERON:0000065;1.97e-10;44!UBERON:0003126;2.19e-10;7!UBERON:0001005;2.19e-10;7!UBERON:0001764;7.55e-09;1!UBERON:0001825;7.55e-09;1!UBERON:0000072;7.73e-09;37!UBERON:0001708;7.87e-09;4!UBERON:0008895;7.87e-09;4!UBERON:0004807;9.56e-09;22!UBERON:0011159;3.15e-07;5!UBERON:0004802;9.88e-07;19!UBERON:0000115;9.88e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.46e-25,5;UBERON:0004815,2.01e-23,3;UBERON:0002031,2.01e-23,3;UBERON:0005910,2.38e-21,6;UBERON:0007196,1.01e-17,15;UBERON:0001558,1.01e-17,15;UBERON:0002419,2.99e-16,2;UBERON:0007771,2.99e-16,2;UBERON:0003297,2.99e-16,2;UBERON:0001821,2.99e-16,2;UBERON:0003487,2.99e-16,2;UBERON:0001820,2.99e-16,2;UBERON:0005089,2.99e-16,2;UBERON:0005088,2.99e-16,2;UBERON:0002185,2.65e-14,5;UBERON:0005178,2.55e-13,34;UBERON:0002224,2.55e-13,34;UBERON:0005181,6.57e-13,35;UBERON:0001004,7.84e-13,74;UBERON:0004119,3.23e-12,160;UBERON:0000925,3.23e-12,160;UBERON:0006595,3.23e-12,160;UBERON:0003126,2.74e-10,7;UBERON:0001005,2.74e-10,7;UBERON:0000065,3.88e-10,54;UBERON:0008947,4.27e-09,38;UBERON:0003258,4.27e-09,38;UBERON:0001708,7.57e-09,4;UBERON:0008895,7.57e-09,4;UBERON:0001764,8.49e-09,1;UBERON:0001825,8.49e-09,1;UBERON:0000915,2.43e-08,52;UBERON:0000485,3.55e-08,9;UBERON:0005911,7.19e-08,82;UBERON:0011159,3.06e-07,5;UBERON:0000072,3.34e-07,47;UBERON:0004807,8.56e-07,28 | |||
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|short_description=p@chr12:28126393..28126427,- | |short_description=p@chr12:28126393..28126427,- | ||
}} | }} |
Latest revision as of 07:56, 24 July 2015
Short description: | p@chr12:28126393..28126427, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:28126393..28126427, - |
Coexpression cluster: | C362_Small_Mallassezderived_Urothelial_Gingival_Prostate_Keratinocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 2.90e-36 | 13 |
transitional epithelial cell | 7.10e-32 | 4 |
urothelial cell | 7.10e-32 | 4 |
epithelial cell of tracheobronchial tree | 8.64e-30 | 9 |
epithelial cell of lower respiratory tract | 8.64e-30 | 9 |
endo-epithelial cell | 2.70e-28 | 42 |
bronchial epithelial cell | 2.01e-23 | 3 |
duct epithelial cell | 3.18e-23 | 3 |
branched duct epithelial cell | 3.18e-23 | 3 |
tracheal epithelial cell | 3.18e-23 | 3 |
tracheoblast | 3.18e-23 | 3 |
endodermal cell | 7.38e-20 | 58 |
sebum secreting cell | 2.99e-16 | 2 |
epithelial cell of sweat gland | 2.99e-16 | 2 |
epithelial cell of skin gland | 2.99e-16 | 2 |
acinar cell of sebaceous gland | 2.99e-16 | 2 |
general ecto-epithelial cell | 9.50e-14 | 14 |
epithelial cell | 1.19e-13 | 253 |
epithelial cell of Malassez | 1.66e-11 | 3 |
epithelial cell of esophagus | 5.75e-09 | 1 |
buccal mucosa cell | 7.27e-09 | 1 |
endothelial cell of viscerocranial mucosa | 7.27e-09 | 1 |
keratinized cell of the oral mucosa | 7.27e-09 | 1 |
epidermal cell | 2.98e-08 | 9 |
ecto-epithelial cell | 9.99e-08 | 34 |
embryonic cell | 1.65e-07 | 250 |
acinar cell | 5.00e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 8.49e-09 | 1 |
maxillary sinus cancer | 8.49e-09 | 1 |