FFCP PHASE1:Hg19::chr12:49375345..49375356,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:49375345..49375356,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_at_chr12:49375345..49375356,- | |description=CAGE_peak_at_chr12:49375345..49375356,- | ||
|id=chr12:49375345..49375356,- | |id=chr12:49375345..49375356,- | ||
|ontology_enrichment_celltype=CL:0000791!3.28e-15!18;CL:0000789!3.28e-15!18;CL:0002420!3.28e-15!18;CL:0002419!3.28e-15!18;CL:0000790!3.28e-15!18;CL:0000624!9.23e-13!6;CL:0000084!2.37e-10!25;CL:0000827!2.37e-10!25;CL:0000838!4.95e-07!52;CL:0000542!7.58e-07!53;CL:0000051!7.58e-07!53;CL:0000625!8.06e-07!11 | |ontology_enrichment_celltype=CL:0000791!3.28e-15!18;CL:0000789!3.28e-15!18;CL:0002420!3.28e-15!18;CL:0002419!3.28e-15!18;CL:0000790!3.28e-15!18;CL:0000624!9.23e-13!6;CL:0000084!2.37e-10!25;CL:0000827!2.37e-10!25;CL:0000838!4.95e-07!52;CL:0000542!7.58e-07!53;CL:0000051!7.58e-07!53;CL:0000625!8.06e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000624;1.50e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.44e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.90e-26;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!9.95e-49!32;UBERON:0001893!1.51e-45!34;UBERON:0002020!3.35e-45!34;UBERON:0003528!3.35e-45!34;UBERON:0002619!7.81e-44!22;UBERON:0002780!2.61e-43!41;UBERON:0001890!2.61e-43!41;UBERON:0006240!2.61e-43!41;UBERON:0002791!6.18e-43!33;UBERON:0003080!3.95e-42!42;UBERON:0000956!3.67e-38!25;UBERON:0000203!3.67e-38!25;UBERON:0001950!4.43e-38!20;UBERON:0001049!6.97e-37!57;UBERON:0005068!6.97e-37!57;UBERON:0006241!6.97e-37!57;UBERON:0007135!6.97e-37!57;UBERON:0002616!2.21e-35!59;UBERON:0000955!9.03e-31!69;UBERON:0006238!9.03e-31!69;UBERON:0003056!5.74e-27!61;UBERON:0001017!1.55e-26!82;UBERON:0005743!6.03e-25!86;UBERON:0002346!7.16e-24!90;UBERON:0003075!1.39e-23!86;UBERON:0007284!1.39e-23!86;UBERON:0000073!7.42e-22!94;UBERON:0001016!7.42e-22!94;UBERON:0001871!1.81e-18!7;UBERON:0000349!8.16e-17!5;UBERON:0000153!1.74e-16!129;UBERON:0007811!1.74e-16!129;UBERON:0000033!2.35e-16!123;UBERON:0007023!1.24e-15!115;UBERON:0002420!4.74e-13!9;UBERON:0007245!4.74e-13!9;UBERON:0010009!4.74e-13!9;UBERON:0010011!4.74e-13!9;UBERON:0000454!4.74e-13!9;UBERON:0000200!1.27e-12!6;UBERON:0000924!5.53e-11!173;UBERON:0006601!5.53e-11!173;UBERON:0004121!1.43e-10!169;UBERON:0001872!7.09e-10!5;UBERON:0002021!1.03e-09!5;UBERON:0002771!1.09e-09!3;UBERON:0002308!7.45e-09!9;UBERON:0000125!7.45e-09!9;UBERON:0000025!2.02e-08!194;UBERON:0000369!2.68e-08!4;UBERON:0002435!2.68e-08!4;UBERON:0000204!2.68e-08!4;UBERON:0010082!2.68e-08!4;UBERON:0009663!6.31e-08!7;UBERON:0001876!8.93e-08!2;UBERON:0001954!1.15e-07!2;UBERON:0003022!1.15e-07!2;UBERON:0002421!1.15e-07!2;UBERON:0002600!1.15e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;1.08e-110;4!UBERON:0002435;1.08e-110;4!UBERON:0000204;1.08e-110;4!UBERON:0005383;1.71e-66;3!UBERON:0005382;1.71e-66;3!UBERON:0009663;7.65e-64;7!UBERON:0001874;1.88e-50;1!UBERON:0001882;5.12e-50;1!UBERON:0005403;5.12e-50;1!UBERON:0002420;6.09e-50;9!UBERON:0000125;6.09e-50;9!UBERON:0007245;6.09e-50;9!UBERON:0002308;6.09e-50;9!UBERON:0010009;6.09e-50;9!UBERON:0010011;6.09e-50;9!UBERON:0000454;6.09e-50;9!UBERON:0001873;4.90e-26;2!UBERON:0002791;6.04e-15;32!UBERON:0003528;2.51e-13;34!UBERON:0002020;2.51e-13;34!UBERON:0001869;2.51e-13;32!UBERON:0001893;1.61e-12;34!UBERON:0000349;3.42e-11;5!UBERON:0002780;6.28e-10;41!UBERON:0001890;6.28e-10;41!UBERON:0000073;1.91e-08;53!UBERON:0002616;1.91e-08;53!UBERON:0000955;3.48e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.30e-110,4;UBERON:0002435,1.30e-110,4;UBERON:0000204,1.30e-110,4;UBERON:0010082,1.30e-110,4;UBERON:0005383,1.71e-66,3;UBERON:0005382,1.71e-66,3;UBERON:0009663,8.52e-64,7;UBERON:0001874,2.42e-50,1;UBERON:0001882,6.58e-50,1;UBERON:0005403,6.58e-50,1;UBERON:0002420,6.62e-50,9;UBERON:0000125,6.62e-50,9;UBERON:0007245,6.62e-50,9;UBERON:0002308,6.62e-50,9;UBERON:0010009,6.62e-50,9;UBERON:0010011,6.62e-50,9;UBERON:0000454,6.62e-50,9;UBERON:0001873,4.32e-26,2;UBERON:0010122,4.32e-26,2;UBERON:0002791,2.11e-14,32;UBERON:0001869,2.11e-14,32;UBERON:0003528,1.23e-13,34;UBERON:0002020,1.23e-13,34;UBERON:0001893,1.23e-13,34;UBERON:0002780,1.61e-11,41;UBERON:0001890,1.61e-11,41;UBERON:0003080,1.61e-11,41;UBERON:0006240,1.61e-11,41;UBERON:0000349,3.60e-11,5;UBERON:0000073,3.71e-09,53;UBERON:0002616,3.71e-09,53;UBERON:0001049,1.02e-08,56;UBERON:0005068,1.02e-08,56;UBERON:0006241,1.02e-08,56;UBERON:0007135,1.02e-08,56;UBERON:0003056,4.39e-08,61;UBERON:0000955,2.97e-07,68;UBERON:0006238,2.97e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,1.17903228824749,0.411202997999018,0,0.32592226663359,0,0,0.334231370655521,0,0.221533894583621,0,0,0,0.164437904603676,0.276350017785848,0,0.444859689486181,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0.506039384039006,0.318565414324097,0,0,0,0.127986611154418,0,0.710331756132051,0,0.604820229674197,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,2.29133233388275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.3755727921195,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,1.02766760154335,0,0.159633859057151,0.41023272848151,0.252071696221718,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0.413373593002368,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.328863867814245,0,0,0,2.19961825882403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543931921527318,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,1.17903228824749,0.411202997999018,0,0.32592226663359,0,0,0.334231370655521,0,0.221533894583621,0,0,0,0.164437904603676,0.276350017785848,0,0.444859689486181,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0.506039384039006,0.318565414324097,0,0,0,0.127986611154418,0,0.710331756132051,0,0.604820229674197,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,2.29133233388275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.3755727921195,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,1.02766760154335,0,0.159633859057151,0.41023272848151,0.252071696221718,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0.413373593002368,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.328863867814245,0,0,0,2.19961825882403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543931921527318,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:49375345..49375356,- | |short_description=p@chr12:49375345..49375356,- | ||
}} | }} |
Latest revision as of 08:57, 24 July 2015
Short description: | p@chr12:49375345..49375356, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:49375345..49375356, - |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.44e-09 | 6 |