FFCP PHASE1:Hg19::chr12:57628762..57628773,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:57628762..57628773,- | |||
|description=CAGE_peak_at_chr12:57628762..57628773,- | |description=CAGE_peak_at_chr12:57628762..57628773,- | ||
|id=chr12:57628762..57628773,- | |id=chr12:57628762..57628773,- | ||
|ontology_enrichment_celltype=CL:0000214!9.35e-11!3;CL:0000153!4.78e-08!9;CL:0000447!4.78e-08!9 | |ontology_enrichment_celltype=CL:0000214!9.35e-11!3;CL:0000153!4.78e-08!9;CL:0000447!4.78e-08!9 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.42e-195;1!UBERON:0003056;2.39e-66;3 | |||
|ontology_enrichment_disease=DOID:5662!1.13e-08!1 | |ontology_enrichment_disease=DOID:5662!1.13e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006915!9.35e-11!3;UBERON:0002018!9.35e-11!3;UBERON:0002217!9.35e-11!3;UBERON:0007616!9.35e-11!3;UBERON:0004457!7.50e-10!12;UBERON:0000042!7.50e-10!12;UBERON:0000941!3.06e-09!1;UBERON:0004904!3.06e-09!1;UBERON:0002464!3.06e-09!1;UBERON:0001021!3.06e-09!1;UBERON:0001785!3.06e-09!1;UBERON:0002135!6.65e-09!1;UBERON:0004905!8.66e-07!5;UBERON:0000982!8.66e-07!5;UBERON:0004770!8.66e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.42e-195;1!UBERON:0001785;5.42e-195;1!UBERON:0002464;5.42e-195;1!UBERON:0004904;5.42e-195;1!UBERON:0001021;5.42e-195;1!UBERON:0003714;1.55e-98;2!UBERON:0005162;1.55e-98;2!UBERON:0000122;1.55e-98;2!UBERON:0000010;2.62e-23;8!UBERON:0004732;1.21e-16;13!UBERON:0002104;6.74e-11;21!UBERON:0001032;1.01e-09;24!UBERON:0004456;1.01e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.42e-195,1;UBERON:0001785,5.42e-195,1;UBERON:0002464,5.42e-195,1;UBERON:0004904,5.42e-195,1;UBERON:0001021,5.42e-195,1;UBERON:0003902,5.42e-195,1;UBERON:0005425,5.42e-195,1;UBERON:0003714,1.55e-98,2;UBERON:0005162,1.55e-98,2;UBERON:0000122,1.55e-98,2;UBERON:0001781,3.10e-50,4;UBERON:0000966,4.27e-34,6;UBERON:0005388,4.27e-34,6;UBERON:0001802,4.27e-34,6;UBERON:0000010,2.62e-23,8;UBERON:0004732,1.21e-16,13;UBERON:0000019,2.29e-11,20;UBERON:0000047,2.29e-11,20;UBERON:0010312,2.29e-11,20;UBERON:0004088,2.29e-11,20;UBERON:0010230,2.29e-11,20;UBERON:0003072,2.29e-11,20;UBERON:0004128,2.29e-11,20;UBERON:0003071,2.29e-11,20;UBERON:0000970,6.74e-11,21;UBERON:0002104,6.74e-11,21;UBERON:0001456,1.80e-10,22;UBERON:0000020,1.01e-09,24;UBERON:0001032,1.01e-09,24;UBERON:0004456,1.01e-09,24;UBERON:0005085,7.41e-08,31 | |||
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|short_description=p@chr12:57628762..57628773,- | |short_description=p@chr12:57628762..57628773,- | ||
}} | }} |
Latest revision as of 10:40, 24 July 2015
Short description: | p@chr12:57628762..57628773, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:57628762..57628773, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 5.42e-195 | 1 |
cranial nerve | 5.42e-195 | 1 |
nerve trunk | 5.42e-195 | 1 |
nerve connecting eye with brain | 5.42e-195 | 1 |
nerve | 5.42e-195 | 1 |
retinal neural layer | 5.42e-195 | 1 |
presumptive neural retina | 5.42e-195 | 1 |
neural tissue | 1.55e-98 | 2 |
multi cell component structure | 1.55e-98 | 2 |
neuron projection bundle | 1.55e-98 | 2 |
layer of retina | 3.10e-50 | 4 |
retina | 4.27e-34 | 6 |
photoreceptor array | 4.27e-34 | 6 |
posterior segment of eyeball | 4.27e-34 | 6 |
peripheral nervous system | 2.62e-23 | 8 |
segmental subdivision of nervous system | 1.21e-16 | 13 |
camera-type eye | 2.29e-11 | 20 |
simple eye | 2.29e-11 | 20 |
immature eye | 2.29e-11 | 20 |
ocular region | 2.29e-11 | 20 |
eyeball of camera-type eye | 2.29e-11 | 20 |
optic cup | 2.29e-11 | 20 |
optic vesicle | 2.29e-11 | 20 |
eye primordium | 2.29e-11 | 20 |
eye | 6.74e-11 | 21 |
visual system | 6.74e-11 | 21 |
face | 1.80e-10 | 22 |
sense organ | 1.01e-09 | 24 |
sensory system | 1.01e-09 | 24 |
entire sense organ system | 1.01e-09 | 24 |
ectodermal placode | 7.41e-08 | 31 |