FFCP PHASE1:Hg19::chr12:7651740..7651752,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:7651740..7651752,- | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_at_chr12:7651740..7651752,- | |description=CAGE_peak_at_chr12:7651740..7651752,- | ||
|id=chr12:7651740..7651752,- | |id=chr12:7651740..7651752,- | ||
|ontology_enrichment_celltype=CL:0002194!3.27e-29!63;CL:0000576!3.27e-29!63;CL:0000040!3.27e-29!63;CL:0000559!3.27e-29!63;CL:0002009!5.16e-28!65;CL:0000839!2.54e-25!70;CL:0000557!7.89e-25!71;CL:0000766!4.12e-24!76;CL:0002057!1.08e-23!42;CL:0000860!1.25e-21!45;CL:0002087!7.86e-14!119;CL:0000763!2.83e-13!112;CL:0000049!2.83e-13!112;CL:0000738!4.16e-11!140;CL:0002031!4.30e-11!124;CL:0002619!3.02e-08!3;CL:0000037!2.44e-07!172;CL:0000566!2.44e-07!172;CL:0002032!8.16e-07!165;CL:0000837!8.16e-07!165 | |ontology_enrichment_celltype=CL:0002194!3.27e-29!63;CL:0000576!3.27e-29!63;CL:0000040!3.27e-29!63;CL:0000559!3.27e-29!63;CL:0002009!5.16e-28!65;CL:0000839!2.54e-25!70;CL:0000557!7.89e-25!71;CL:0000766!4.12e-24!76;CL:0002057!1.08e-23!42;CL:0000860!1.25e-21!45;CL:0002087!7.86e-14!119;CL:0000763!2.83e-13!112;CL:0000049!2.83e-13!112;CL:0000738!4.16e-11!140;CL:0002031!4.30e-11!124;CL:0002619!3.02e-08!3;CL:0000037!2.44e-07!172;CL:0000566!2.44e-07!172;CL:0002032!8.16e-07!165;CL:0000837!8.16e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000235;9.67e-39;6!CL:0002619;1.18e-28;3!CL:0000473;5.09e-11;39!CL:0000234;5.09e-11;39!CL:0000576;1.06e-09;48!CL:0000766;1.77e-09;69!CL:0002393;7.30e-07;6!CL:0002397;7.30e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.01e-38,6;CL:0002619,1.18e-28,3;CL:0002194,1.37e-23,59;CL:0000576,1.37e-23,59;CL:0000040,1.37e-23,59;CL:0000559,1.37e-23,59;CL:0002009,9.24e-23,61;CL:0000839,6.62e-21,66;CL:0000557,1.44e-20,67;CL:0000766,5.16e-19,72;CL:0000473,2.00e-17,48;CL:0000234,2.00e-17,48;CL:0000763,5.00e-12,108;CL:0000049,5.00e-12,108;CL:0002087,3.59e-11,115;CL:0002031,1.28e-10,120;CL:0000738,3.98e-09,136;CL:0002032,2.21e-07,161;CL:0000837,2.21e-07,161;CL:0000037,5.49e-07,168 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.57e-10;1!UBERON:0010226;2.87e-10;1!UBERON:0010115;2.87e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.21e-31!115;UBERON:0002390!1.28e-21!102;UBERON:0003061!1.28e-21!102;UBERON:0002371!5.89e-21!80;UBERON:0002193!4.43e-20!112;UBERON:0002405!2.11e-19!115;UBERON:0001474!7.83e-19!86;UBERON:0004765!1.18e-14!101;UBERON:0001434!1.18e-14!101;UBERON:0000062!3.69e-11!511;UBERON:0003081!3.26e-10!216;UBERON:0000467!2.69e-08!625;UBERON:0000480!3.01e-08!626;UBERON:0002298!3.63e-08!8;UBERON:0001049!3.65e-08!57;UBERON:0005068!3.65e-08!57;UBERON:0006241!3.65e-08!57;UBERON:0007135!3.65e-08!57;UBERON:0002204!2.93e-07!167;UBERON:0000468!3.14e-07!659;UBERON:0002308!5.25e-07!9;UBERON:0000125!5.25e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!1.21e-31!115;UBERON:0002390!1.28e-21!102;UBERON:0003061!1.28e-21!102;UBERON:0002371!5.89e-21!80;UBERON:0002193!4.43e-20!112;UBERON:0002405!2.11e-19!115;UBERON:0001474!7.83e-19!86;UBERON:0004765!1.18e-14!101;UBERON:0001434!1.18e-14!101;UBERON:0000062!3.69e-11!511;UBERON:0003081!3.26e-10!216;UBERON:0000467!2.69e-08!625;UBERON:0000480!3.01e-08!626;UBERON:0002298!3.63e-08!8;UBERON:0001049!3.65e-08!57;UBERON:0005068!3.65e-08!57;UBERON:0006241!3.65e-08!57;UBERON:0007135!3.65e-08!57;UBERON:0002204!2.93e-07!167;UBERON:0000468!3.14e-07!659;UBERON:0002308!5.25e-07!9;UBERON:0000125!5.25e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;4.99e-13;3!UBERON:0000029;8.53e-11;1!UBERON:0002079;1.57e-10;1!UBERON:0002363;2.87e-10;1!UBERON:0002084;2.87e-10;1!UBERON:0002082;2.87e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,2.13e-19,93;UBERON:0002371,6.46e-18,76;UBERON:0001474,1.82e-16,82;UBERON:0002193,2.18e-16,108;UBERON:0002390,9.69e-16,98;UBERON:0003061,9.69e-16,98;UBERON:0004765,7.84e-15,90;UBERON:0004151,3.57e-13,3;UBERON:0001434,3.76e-13,100;UBERON:0000029,8.14e-11,1;UBERON:0002079,1.57e-10,1;UBERON:0002084,1.73e-10,1;UBERON:0002082,1.73e-10,1;UBERON:0010226,1.73e-10,1;UBERON:0002363,4.33e-10,1;UBERON:0007645,4.33e-10,1;UBERON:0007647,4.33e-10,1;UBERON:0010115,4.33e-10,1;UBERON:0003081,8.54e-09,203;UBERON:0002204,4.85e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,1.00272223735071,1.30206522429511,9.40444991807682,3.2389366601898,5.15151135268373,0.145398238779565,0.377875943688809,0,0.232429036905685,0,0.309706370895104,1.43846196161075,0,0.47296445977717,0,0,0,0.564727018627814,0.545812300115692,0,0.306083892370903,0,0,0.989553900560148,0.598390972864896,0,0,0.56738522469114,0,0.75374599577023,1.0429658368404,0.65156653411535,1.21079900526674,0.368277635987565,0.316462387440884,0,0,0,0.561643155732475,0.450530678524519,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69325509131096,0,4.7561971932393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,3.01354254859276,23.1917333431335,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01098527405581,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0.279282401272254,0,0,0.399358000997982,0.858452096273142,0,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,2.1440859791201,1.98627591109629,0,0,0,0,0,0,0,0,0.293104467356165,0,0.129282956361551,0.13223260174269,0,0,1.28144895081234,0,0.414239055347196,6.45015828355536,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,1.21393120847326,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0,0,1.2217909337381,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0.250707539292375,0.227336094654718,0.267964130156178,0,0.103432995861895,0,0,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,1.00272223735071,1.30206522429511,9.40444991807682,3.2389366601898,5.15151135268373,0.145398238779565,0.377875943688809,0,0.232429036905685,0,0.309706370895104,1.43846196161075,0,0.47296445977717,0,0,0,0.564727018627814,0.545812300115692,0,0.306083892370903,0,0,0.989553900560148,0.598390972864896,0,0,0.56738522469114,0,0.75374599577023,1.0429658368404,0.65156653411535,1.21079900526674,0.368277635987565,0.316462387440884,0,0,0,0.561643155732475,0.450530678524519,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69325509131096,0,4.7561971932393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,3.01354254859276,23.1917333431335,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01098527405581,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0.279282401272254,0,0,0.399358000997982,0.858452096273142,0,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,2.1440859791201,1.98627591109629,0,0,0,0,0,0,0,0,0.293104467356165,0,0.129282956361551,0.13223260174269,0,0,1.28144895081234,0,0.414239055347196,6.45015828355536,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,1.21393120847326,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0,0,1.2217909337381,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0.250707539292375,0.227336094654718,0.267964130156178,0,0.103432995861895,0,0,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | ||
|short_description=p@chr12:7651740..7651752,- | |short_description=p@chr12:7651740..7651752,- | ||
}} | }} |
Latest revision as of 12:27, 24 July 2015
Short description: | p@chr12:7651740..7651752, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:7651740..7651752, - |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.01e-38 | 6 |
adult endothelial progenitor cell | 1.18e-28 | 3 |
monopoietic cell | 1.37e-23 | 59 |
monocyte | 1.37e-23 | 59 |
monoblast | 1.37e-23 | 59 |
promonocyte | 1.37e-23 | 59 |
macrophage dendritic cell progenitor | 9.24e-23 | 61 |
myeloid lineage restricted progenitor cell | 6.62e-21 | 66 |
granulocyte monocyte progenitor cell | 1.44e-20 | 67 |
myeloid leukocyte | 5.16e-19 | 72 |
defensive cell | 2.00e-17 | 48 |
phagocyte | 2.00e-17 | 48 |
myeloid cell | 5.00e-12 | 108 |
common myeloid progenitor | 5.00e-12 | 108 |
nongranular leukocyte | 3.59e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.28e-10 | 120 |
leukocyte | 3.98e-09 | 136 |
hematopoietic oligopotent progenitor cell | 2.21e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.21e-07 | 161 |
hematopoietic stem cell | 5.49e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
immune system | 2.13e-19 | 93 |
bone marrow | 6.46e-18 | 76 |
bone element | 1.82e-16 | 82 |
hemolymphoid system | 2.18e-16 | 108 |
hematopoietic system | 9.69e-16 | 98 |
blood island | 9.69e-16 | 98 |
skeletal element | 7.84e-15 | 90 |
cardiac chamber | 3.57e-13 | 3 |
skeletal system | 3.76e-13 | 100 |
lymph node | 8.14e-11 | 1 |
left cardiac atrium | 1.57e-10 | 1 |
heart left ventricle | 1.73e-10 | 1 |
cardiac ventricle | 1.73e-10 | 1 |
future cardiac ventricle | 1.73e-10 | 1 |
dura mater | 4.33e-10 | 1 |
future meninx | 4.33e-10 | 1 |
ectomeninx | 4.33e-10 | 1 |
future dura mater | 4.33e-10 | 1 |
lateral plate mesoderm | 8.54e-09 | 203 |
musculoskeletal system | 4.85e-07 | 167 |