FFCP PHASE1:Hg19::chr12:904683..904689,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:904683..904689,+ | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_at_chr12:904683..904689,+ | |description=CAGE_peak_at_chr12:904683..904689,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000988!1.09e-16!182;CL:0002274!4.33e-16!5;CL:0000457!4.33e-16!5;CL:0002191!4.33e-16!5;CL:0000097!4.33e-16!5;CL:0000831!4.33e-16!5;CL:0002028!4.33e-16!5;CL:0000037!1.51e-14!172;CL:0000566!1.51e-14!172;CL:0002032!2.37e-14!165;CL:0000837!2.37e-14!165;CL:0002031!1.73e-12!124;CL:0000738!2.38e-12!140;CL:0000763!4.88e-09!112;CL:0000049!4.88e-09!112;CL:0000163!8.98e-09!9;CL:0002087!5.27e-08!119;CL:0000839!1.19e-07!70;CL:0000557!1.71e-07!71;CL:0000766!8.90e-07!76 | |ontology_enrichment_celltype=CL:0000988!1.09e-16!182;CL:0002274!4.33e-16!5;CL:0000457!4.33e-16!5;CL:0002191!4.33e-16!5;CL:0000097!4.33e-16!5;CL:0000831!4.33e-16!5;CL:0002028!4.33e-16!5;CL:0000037!1.51e-14!172;CL:0000566!1.51e-14!172;CL:0002032!2.37e-14!165;CL:0000837!2.37e-14!165;CL:0002031!1.73e-12!124;CL:0000738!2.38e-12!140;CL:0000763!4.88e-09!112;CL:0000049!4.88e-09!112;CL:0000163!8.98e-09!9;CL:0002087!5.27e-08!119;CL:0000839!1.19e-07!70;CL:0000557!1.71e-07!71;CL:0000766!8.90e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000097;8.96e-20;5!CL:0000946;1.19e-11;1!CL:0000786;1.19e-11;1!CL:0000163;2.99e-11;9!CL:0000988;6.33e-07;177 | |ontology_enrichment_celltype_v019=CL:0000097;8.96e-20;5!CL:0000946;1.19e-11;1!CL:0000786;1.19e-11;1!CL:0000163;2.99e-11;9!CL:0000988;6.33e-07;177 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.16e-19,5;CL:0002028,1.16e-19,5;CL:0000988,9.79e-15,177;CL:0000946,1.07e-11,1;CL:0000786,1.07e-11,1;CL:0000980,1.07e-11,1;CL:0000163,3.43e-11,9;CL:0000037,4.44e-10,168;CL:0002032,5.63e-09,161;CL:0000837,5.63e-09,161;CL:0000763,3.48e-08,108;CL:0000049,3.48e-08,108;CL:0000738,1.03e-07,136;CL:0002031,2.66e-07,120;CL:0000839,5.26e-07,66;CL:0000557,6.83e-07,67 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2531!5.15e-09!51;DOID:0060083!5.15e-09!51 | |ontology_enrichment_disease=DOID:2531!5.15e-09!51;DOID:0060083!5.15e-09!51 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,4.87e-07,51;DOID:0060083,4.87e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.91e-07!102;UBERON:0003061!1.91e-07!102 | |ontology_enrichment_uberon=UBERON:0002390!1.91e-07!102;UBERON:0003061!1.91e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.01e-10;10!UBERON:0000178;5.41e-07;15!UBERON:0000179;5.41e-07;15!UBERON:0000463;5.41e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0002331;3.01e-10;10!UBERON:0000178;5.41e-07;15!UBERON:0000179;5.41e-07;15!UBERON:0000463;5.41e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.01e-10,10;UBERON:0000358,3.01e-10,10;UBERON:0000307,3.01e-10,10;UBERON:0000091,3.01e-10,10;UBERON:0000087,3.01e-10,10;UBERON:0007010,3.01e-10,10;UBERON:0007806,3.01e-10,10;UBERON:0008780,3.01e-10,10;UBERON:0005728,3.01e-10,10;UBERON:0002390,2.84e-09,98;UBERON:0003061,2.84e-09,98;UBERON:0002193,2.71e-08,108;UBERON:0000178,5.41e-07,15;UBERON:0000179,5.41e-07,15;UBERON:0000463,5.41e-07,15 | |||
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| ||
|short_description=p@chr12:904683..904689,+ | |short_description=p@chr12:904683..904689,+ | ||
}} | }} |
Latest revision as of 13:25, 24 July 2015
Short description: | p@chr12:904683..904689, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:904683..904689, + |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.16e-19 | 5 |
basophil mast progenitor cell | 1.16e-19 | 5 |
hematopoietic cell | 9.79e-15 | 177 |
antibody secreting cell | 1.07e-11 | 1 |
plasma cell | 1.07e-11 | 1 |
plasmablast | 1.07e-11 | 1 |
endocrine cell | 3.43e-11 | 9 |
hematopoietic stem cell | 4.44e-10 | 168 |
hematopoietic oligopotent progenitor cell | 5.63e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.63e-09 | 161 |
myeloid cell | 3.48e-08 | 108 |
common myeloid progenitor | 3.48e-08 | 108 |
leukocyte | 1.03e-07 | 136 |
hematopoietic lineage restricted progenitor cell | 2.66e-07 | 120 |
myeloid lineage restricted progenitor cell | 5.26e-07 | 66 |
granulocyte monocyte progenitor cell | 6.83e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.01e-10 | 10 |
blastocyst | 3.01e-10 | 10 |
blastula | 3.01e-10 | 10 |
bilaminar disc | 3.01e-10 | 10 |
inner cell mass | 3.01e-10 | 10 |
cleaving embryo | 3.01e-10 | 10 |
connecting stalk | 3.01e-10 | 10 |
inner cell mass derived epiblast | 3.01e-10 | 10 |
extraembryonic mesoderm | 3.01e-10 | 10 |
hematopoietic system | 2.84e-09 | 98 |
blood island | 2.84e-09 | 98 |
hemolymphoid system | 2.71e-08 | 108 |
blood | 5.41e-07 | 15 |
haemolymphatic fluid | 5.41e-07 | 15 |
organism substance | 5.41e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.87e-07 | 51 |
immune system cancer | 4.87e-07 | 51 |