FFCP PHASE1:Hg19::chr12:97286249..97286254,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:97286249..97286254,+ | |||
|coexpression_cluster_id=C730 | |coexpression_cluster_id=C730 | ||
|description=CAGE_peak_at_chr12:97286249..97286254,+ | |description=CAGE_peak_at_chr12:97286249..97286254,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002231!1.41e-07!3 | |ontology_enrichment_celltype=CL:0002231!1.41e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000453;7.70e-17;5!CL:0002336;7.88e-10;1!CL:0002261;7.88e-10;1!CL:0002170;7.88e-10;1!CL:0000990;1.36e-09;8!CL:0000451;6.22e-08;10 | |ontology_enrichment_celltype_v019=CL:0000453;7.70e-17;5!CL:0002336;7.88e-10;1!CL:0002261;7.88e-10;1!CL:0002170;7.88e-10;1!CL:0000990;1.36e-09;8!CL:0000451;6.22e-08;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,7.70e-17,5;CL:0002336,6.33e-10,1;CL:0002261,6.33e-10,1;CL:0002170,6.33e-10,1;CL:0000990,1.36e-09,8;CL:0000451,6.22e-08,10 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060058!1.01e-07!10 | |ontology_enrichment_disease=DOID:0060058!1.01e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:630;3.55e-10;1!DOID:0050177;3.55e-10;1!DOID:0050427;3.55e-10;1 | |ontology_enrichment_disease_v019=DOID:630;3.55e-10;1!DOID:0050177;3.55e-10;1!DOID:0050427;3.55e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,3.40e-10,1;DOID:0050177,3.40e-10,1;DOID:0050427,3.40e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000162!8.21e-07!14;UBERON:0001353!8.21e-07!14;UBERON:0000163!8.21e-07!14;UBERON:0006866!8.21e-07!14;UBERON:0000164!8.21e-07!14;UBERON:0000931!8.21e-07!14 | |ontology_enrichment_uberon=UBERON:0000162!8.21e-07!14;UBERON:0001353!8.21e-07!14;UBERON:0000163!8.21e-07!14;UBERON:0006866!8.21e-07!14;UBERON:0000164!8.21e-07!14;UBERON:0000931!8.21e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.35e-18;2!UBERON:0005058;6.35e-18;2!UBERON:0009113;6.35e-18;2!UBERON:0004177;4.71e-16;5!UBERON:0005057;4.71e-16;5!UBERON:0005795;3.55e-10;1!UBERON:0006834;7.88e-10;1!UBERON:0002331;1.11e-08;10!UBERON:0002390;2.21e-08;32!UBERON:0002050;4.53e-08;5!UBERON:0005423;4.53e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;6.35e-18;2!UBERON:0005058;6.35e-18;2!UBERON:0009113;6.35e-18;2!UBERON:0004177;4.71e-16;5!UBERON:0005057;4.71e-16;5!UBERON:0005795;3.55e-10;1!UBERON:0006834;7.88e-10;1!UBERON:0002331;1.11e-08;10!UBERON:0002390;2.21e-08;32!UBERON:0002050;4.53e-08;5!UBERON:0005423;4.53e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.46e-11,7;UBERON:0005057,1.46e-11,7;UBERON:0006834,8.24e-10,1;UBERON:0002370,2.54e-09,4;UBERON:0005058,2.54e-09,4;UBERON:0009113,2.54e-09,4;UBERON:0003295,2.54e-09,4;UBERON:0005562,2.54e-09,4;UBERON:0002331,1.11e-08,10;UBERON:0000358,1.11e-08,10;UBERON:0000307,1.11e-08,10;UBERON:0000091,1.11e-08,10;UBERON:0000087,1.11e-08,10;UBERON:0007010,1.11e-08,10;UBERON:0007806,1.11e-08,10;UBERON:0008780,1.11e-08,10;UBERON:0005728,1.11e-08,10;UBERON:0000974,3.87e-08,10 | |||
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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75750833220288,2.21671591514854,1.81034797021462,0,0,0,0,0,0,0.309868802321207,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368199594569197,0,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.100528972411631,1.75918045801206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0.290633938513962,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,1.20303882181971,0.552485933615378,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0.886860307073351,4.13502120372527,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0.139423744278603,2.07765697960252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,1.83309043480088,19.8669156216017,7.41383633679017,6.99627061686551,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0.543616824294456,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0,0,0,0,0.542999601753713,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0.638341257770182,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45608864750288,9.43340366224878,13.5759277232351,0,0,0,0.79994958341972,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,1.65157612686837,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,8.79356221798103,0.383287282918786,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0.863424021355654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0,4.4973520166218,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.151557396436479,0,0,0,0,0,1.29177819672012,1.42771842880473,0,0,0,0,0,0.26940821205835,0,0,0.0814032686109745,0,0,0,0,1.58913877437726,4.06896178315738,0,0.603821380773079,4.16739039994203 | ||
|short_description=p@chr12:97286249..97286254,+ | |short_description=p@chr12:97286249..97286254,+ | ||
}} | }} |
Latest revision as of 13:57, 24 July 2015
Short description: | p@chr12:97286249..97286254, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:97286249..97286254, + |
Coexpression cluster: | C730_migratory_cord_Mast_B_b_CD14_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 7.70e-17 | 5 |
buccal mucosa cell | 6.33e-10 | 1 |
endothelial cell of viscerocranial mucosa | 6.33e-10 | 1 |
keratinized cell of the oral mucosa | 6.33e-10 | 1 |
conventional dendritic cell | 1.36e-09 | 8 |
dendritic cell | 6.22e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.46e-11 | 7 |
immune organ | 1.46e-11 | 7 |
uterus or analog | 8.24e-10 | 1 |
thymus | 2.54e-09 | 4 |
hemolymphoid system gland | 2.54e-09 | 4 |
thymic region | 2.54e-09 | 4 |
pharyngeal gland | 2.54e-09 | 4 |
thymus primordium | 2.54e-09 | 4 |
umbilical cord | 1.11e-08 | 10 |
blastocyst | 1.11e-08 | 10 |
blastula | 1.11e-08 | 10 |
bilaminar disc | 1.11e-08 | 10 |
inner cell mass | 1.11e-08 | 10 |
cleaving embryo | 1.11e-08 | 10 |
connecting stalk | 1.11e-08 | 10 |
inner cell mass derived epiblast | 1.11e-08 | 10 |
extraembryonic mesoderm | 1.11e-08 | 10 |
neck | 3.87e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.40e-10 | 1 |
monogenic disease | 3.40e-10 | 1 |
xeroderma pigmentosum | 3.40e-10 | 1 |