FFCP PHASE1:Hg19::chr13:106753025..106753026,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:106753025..106753026,- | |||
|coexpression_cluster_id=C3351 | |coexpression_cluster_id=C3351 | ||
|description=CAGE_peak_at_chr13:106753025..106753026,- | |description=CAGE_peak_at_chr13:106753025..106753026,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002178!5.92e-10!3;CL:0000083!5.38e-08!4;CL:0000039!8.95e-08!7;CL:0000586!8.95e-08!7;CL:0000223!3.40e-07!59 | |ontology_enrichment_celltype=CL:0002178!5.92e-10!3;CL:0000083!5.38e-08!4;CL:0000039!8.95e-08!7;CL:0000586!8.95e-08!7;CL:0000223!3.40e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000039;5.38e-07;7!CL:0000586;5.38e-07;7 | |ontology_enrichment_celltype_v019=CL:0000039;5.38e-07;7!CL:0000586;5.38e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.38e-07,7;CL:0000586,5.38e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.21e-40;1!UBERON:0003056;1.83e-14;3 | |ontology_enrichment_development_v019=UBERON:0005425;2.21e-40;1!UBERON:0003056;1.83e-14;3 | ||
|ontology_enrichment_disease=DOID:305!6.08e-15!106;DOID:0050687!3.00e-12!143;DOID:162!4.09e-09!235;DOID:14566!9.55e-09!239;DOID:1793!5.38e-08!4;DOID:4074!2.15e-07!2;DOID:4905!2.15e-07!2;DOID:3498!2.15e-07!2;DOID:0050686!5.01e-07!137 | |ontology_enrichment_disease=DOID:305!6.08e-15!106;DOID:0050687!3.00e-12!143;DOID:162!4.09e-09!235;DOID:14566!9.55e-09!239;DOID:1793!5.38e-08!4;DOID:4074!2.15e-07!2;DOID:4905!2.15e-07!2;DOID:3498!2.15e-07!2;DOID:0050686!5.01e-07!137 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.21e-40;1!UBERON:0001785;2.21e-40;1!UBERON:0002464;2.21e-40;1!UBERON:0004904;2.21e-40;1!UBERON:0001021;2.21e-40;1!UBERON:0003714;5.69e-21;2!UBERON:0005162;5.69e-21;2!UBERON:0000122;5.69e-21;2 | |ontology_enrichment_uberon_v019=UBERON:0000941;2.21e-40;1!UBERON:0001785;2.21e-40;1!UBERON:0002464;2.21e-40;1!UBERON:0004904;2.21e-40;1!UBERON:0001021;2.21e-40;1!UBERON:0003714;5.69e-21;2!UBERON:0005162;5.69e-21;2!UBERON:0000122;5.69e-21;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.48e-40,1;UBERON:0001785,1.48e-40,1;UBERON:0002464,1.48e-40,1;UBERON:0004904,1.48e-40,1;UBERON:0001021,1.48e-40,1;UBERON:0003902,1.48e-40,1;UBERON:0005425,1.48e-40,1;UBERON:0003714,4.66e-21,2;UBERON:0005162,4.66e-21,2;UBERON:0000122,4.66e-21,2;UBERON:0001781,3.10e-11,4;UBERON:0000966,6.34e-08,6;UBERON:0005388,6.34e-08,6;UBERON:0001802,6.34e-08,6 | |||
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| ||
|short_description=p@chr13:106753025..106753026,- | |short_description=p@chr13:106753025..106753026,- | ||
}} | }} |
Latest revision as of 14:21, 24 July 2015
Short description: | p@chr13:106753025..106753026, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:106753025..106753026, - |
Coexpression cluster: | C3351_anaplastic_testicular_small_gastrointestinal_gall_optic_gastric |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.38e-07 | 7 |
germ cell | 5.38e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.48e-40 | 1 |
cranial nerve | 1.48e-40 | 1 |
nerve trunk | 1.48e-40 | 1 |
nerve connecting eye with brain | 1.48e-40 | 1 |
nerve | 1.48e-40 | 1 |
retinal neural layer | 1.48e-40 | 1 |
presumptive neural retina | 1.48e-40 | 1 |
neural tissue | 4.66e-21 | 2 |
multi cell component structure | 4.66e-21 | 2 |
neuron projection bundle | 4.66e-21 | 2 |
layer of retina | 3.10e-11 | 4 |
retina | 6.34e-08 | 6 |
photoreceptor array | 6.34e-08 | 6 |
posterior segment of eyeball | 6.34e-08 | 6 |