FFCP PHASE1:Hg19::chr13:25755464..25755475,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-103bp_to_ENST00000457628_5end | |association_with_transcript=-103bp_to_ENST00000457628_5end | ||
|cluster_id=chr13:25755464..25755475,+ | |||
|coexpression_cluster_id=C87 | |||
|description=CAGE_peak_3_at_ENST00000457628_5end | |description=CAGE_peak_3_at_ENST00000457628_5end | ||
|id=chr13:25755464..25755475,+ | |id=chr13:25755464..25755475,+ | ||
|ontology_enrichment_celltype=CL:0000945!3.01e-11!24;CL:0000826!3.01e-11!24 | |ontology_enrichment_celltype=CL:0000945!3.01e-11!24;CL:0000826!3.01e-11!24 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.76e-18;3 | |||
|ontology_enrichment_disease=DOID:2355!4.20e-29!1;DOID:74!2.74e-15!2;DOID:0060058!3.15e-12!10;DOID:5409!1.82e-08!4;DOID:1287!2.61e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.00e-13;4!DOID:1325;2.03e-08;7!DOID:3904;2.03e-08;7!DOID:3905;7.91e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.00e-13,4;DOID:1325,2.03e-08,7;DOID:3904,2.03e-08,7;DOID:3905,7.91e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001905!3.58e-57!2;UBERON:0002757!3.58e-57!2;UBERON:0010134!3.58e-57!2;UBERON:0002784!3.58e-57!2;UBERON:0005408!3.58e-57!2;UBERON:0001899!3.58e-57!2;UBERON:0003296!3.16e-29!4;UBERON:0010133!3.16e-29!4;UBERON:0001894!3.42e-17!7;UBERON:0006222!3.42e-17!7;UBERON:0000966!4.79e-07!5;UBERON:0005388!4.79e-07!5;UBERON:0001802!4.79e-07!5 | |ontology_enrichment_uberon=UBERON:0001905!3.58e-57!2;UBERON:0002757!3.58e-57!2;UBERON:0010134!3.58e-57!2;UBERON:0002784!3.58e-57!2;UBERON:0005408!3.58e-57!2;UBERON:0001899!3.58e-57!2;UBERON:0003296!3.16e-29!4;UBERON:0010133!3.16e-29!4;UBERON:0001894!3.42e-17!7;UBERON:0006222!3.42e-17!7;UBERON:0000966!4.79e-07!5;UBERON:0005388!4.79e-07!5;UBERON:0001802!4.79e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.22e-98;2!UBERON:0002757;4.22e-98;2!UBERON:0010134;4.22e-98;2!UBERON:0005408;4.22e-98;2!UBERON:0001899;4.22e-98;2!UBERON:0003296;8.47e-50;4!UBERON:0010133;8.47e-50;4!UBERON:0002784;8.47e-50;4!UBERON:0001894;4.86e-29;7!UBERON:0000966;2.66e-11;5!UBERON:0005388;2.66e-11;5!UBERON:0001802;2.66e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.22e-98,2;UBERON:0002757,4.22e-98,2;UBERON:0010134,4.22e-98,2;UBERON:0005408,4.22e-98,2;UBERON:0001899,4.22e-98,2;UBERON:0003296,8.47e-50,4;UBERON:0010133,8.47e-50,4;UBERON:0002784,8.47e-50,4;UBERON:0001894,4.86e-29,7;UBERON:0006222,4.86e-29,7;UBERON:0000966,1.22e-09,6;UBERON:0005388,1.22e-09,6;UBERON:0001802,1.22e-09,6;UBERON:0003056,4.50e-08,61;UBERON:0000955,3.04e-07,68;UBERON:0006238,3.04e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67850917939143,8.07080933325178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9593747850054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6536947750155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67850917939143,8.07080933325178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9593747850054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6536947750155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@ENST00000457628 | |short_description=p3@ENST00000457628 | ||
}} | }} |
Latest revision as of 15:14, 24 July 2015
Short description: | p3@ENST00000457628 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000457628_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | -103bp_to_ENST00000457628_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 4.22e-98 | 2 |
regional part of epithalamus | 4.22e-98 | 2 |
secretory circumventricular organ | 4.22e-98 | 2 |
circumventricular organ | 4.22e-98 | 2 |
epithalamus | 4.22e-98 | 2 |
gland of diencephalon | 8.47e-50 | 4 |
neuroendocrine gland | 8.47e-50 | 4 |
regional part of diencephalon | 8.47e-50 | 4 |
diencephalon | 4.86e-29 | 7 |
future diencephalon | 4.86e-29 | 7 |
retina | 1.22e-09 | 6 |
photoreceptor array | 1.22e-09 | 6 |
posterior segment of eyeball | 1.22e-09 | 6 |
pre-chordal neural plate | 4.50e-08 | 61 |
brain | 3.04e-07 | 68 |
future brain | 3.04e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.00e-13 | 4 |
bronchus cancer | 2.03e-08 | 7 |
bronchogenic carcinoma | 2.03e-08 | 7 |
lung carcinoma | 7.91e-07 | 9 |