FFCP PHASE1:Hg19::chr13:80915252..80915274,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=10253 | |EntrezGene=entrezgene:10253 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=11270 | |HGNC=HGNC:11270 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=O43597 | |UniProt=uniprot:O43597 | ||
|association_with_transcript=-166bp_to_ENST00000377104,NM_005842,uc001vlj.2_5end | |association_with_transcript=-166bp_to_ENST00000377104,NM_005842,uc001vlj.2_5end | ||
|cluster_id=chr13:80915252..80915274,- | |||
|coexpression_cluster_id=C3386 | |coexpression_cluster_id=C3386 | ||
|description=CAGE_peak_1_at_SPRY2_5end | |description=CAGE_peak_1_at_SPRY2_5end |
Revision as of 17:21, 24 July 2015
Short description: | p1@SPRY2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPRY2_5end |
Coexpression cluster: | C3386_gastric_Trabecular_Keratocytes_Neural_rhabdomyosarcoma_embryonic_Fibroblast |
Association with transcript: | -166bp_to_ENST00000377104, NM_005842, uc001vlj.2_5end |
EntrezGene: | 10253 |
HGNC: | 11270 |
UniProt: | O43597 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SPRY2 |
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25
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150
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.85e-10 | 250 |
electrically responsive cell | 1.78e-09 | 61 |
electrically active cell | 1.78e-09 | 61 |
muscle precursor cell | 1.09e-08 | 58 |
myoblast | 1.09e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.09e-08 | 58 |
muscle cell | 2.33e-08 | 55 |
vascular associated smooth muscle cell | 2.88e-08 | 32 |
mesodermal cell | 5.80e-08 | 121 |
smooth muscle cell | 1.16e-07 | 43 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
---|---|---|
cell layer | 2.48e-25 | 309 |
epithelium | 5.96e-25 | 306 |
anatomical conduit | 2.23e-21 | 240 |
structure with developmental contribution from neural crest | 2.40e-21 | 132 |
tube | 3.23e-21 | 192 |
embryo | 4.64e-16 | 592 |
neural plate | 3.46e-15 | 82 |
presumptive neural plate | 3.46e-15 | 82 |
ectoderm-derived structure | 3.68e-15 | 171 |
ectoderm | 3.68e-15 | 171 |
Showing 1 to 10 of 77 entries