FFCP PHASE1:Hg19::chr13:94958055..94958072,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:94958055..94958072,+ | |||
|description=CAGE_peak_at_chr13:94958055..94958072,+ | |description=CAGE_peak_at_chr13:94958055..94958072,+ | ||
|id=chr13:94958055..94958072,+ | |id=chr13:94958055..94958072,+ | ||
|ontology_enrichment_celltype=CL:0000188!7.69e-27!9;CL:0000594!5.73e-13!3;CL:0002504!5.89e-12!3;CL:1000279!5.89e-12!3;CL:1000280!5.89e-12!3;CL:0000680!4.27e-10!57;CL:0000056!4.27e-10!57;CL:0000355!4.27e-10!57;CL:0002554!4.53e-09!2;CL:0002570!4.29e-08!8;CL:0002583!4.87e-08!2;CL:0000187!1.00e-07!54;CL:0000183!7.34e-07!59 | |ontology_enrichment_celltype=CL:0000188!7.69e-27!9;CL:0000594!5.73e-13!3;CL:0002504!5.89e-12!3;CL:1000279!5.89e-12!3;CL:1000280!5.89e-12!3;CL:0000680!4.27e-10!57;CL:0000056!4.27e-10!57;CL:0000355!4.27e-10!57;CL:0002554!4.53e-09!2;CL:0002570!4.29e-08!8;CL:0002583!4.87e-08!2;CL:0000187!1.00e-07!54;CL:0000183!7.34e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000594;1.04e-54;3!CL:0000188;6.89e-50;9!CL:0000680;1.84e-41;7!CL:0000511;3.25e-19;1!CL:0002625;3.25e-19;1!CL:0000216;3.25e-19;1!CL:0002554;2.72e-10;2!CL:0002570;3.68e-10;8!CL:0000187;7.74e-08;55!CL:0000515;2.79e-07;3 | |ontology_enrichment_celltype_v019=CL:0000594;1.04e-54;3!CL:0000188;6.89e-50;9!CL:0000680;1.84e-41;7!CL:0000511;3.25e-19;1!CL:0002625;3.25e-19;1!CL:0000216;3.25e-19;1!CL:0002554;2.72e-10;2!CL:0002570;3.68e-10;8!CL:0000187;7.74e-08;55!CL:0000515;2.79e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000594,1.51e-54,3;CL:0000188,9.35e-50,9;CL:0000511,2.25e-19,1;CL:0002625,2.25e-19,1;CL:0000216,2.25e-19,1;CL:0000680,5.15e-11,58;CL:0000056,5.15e-11,58;CL:0000355,5.15e-11,58;CL:0002554,2.49e-10,2;CL:0002570,3.68e-10,8;CL:0000187,2.87e-08,55;CL:0000393,1.86e-07,61;CL:0000211,1.86e-07,61;CL:0000222,6.20e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000355;1.68e-08;58 | |ontology_enrichment_development_v019=CL:0000355;1.68e-08;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!2.43e-13!70;UBERON:0000486!9.32e-11!82;UBERON:0001134!1.10e-10!61;UBERON:0002036!1.10e-10!61;UBERON:0003082!1.10e-10!61;UBERON:0000914!1.41e-10!83;UBERON:0002329!1.41e-10!83;UBERON:0003077!1.41e-10!83;UBERON:0003059!1.41e-10!83;UBERON:0007282!1.41e-10!83;UBERON:0009618!1.41e-10!83;UBERON:0007285!1.41e-10!83;UBERON:0002385!3.09e-10!63;UBERON:0001015!3.09e-10!63;UBERON:0000383!3.09e-10!63 | |ontology_enrichment_uberon=UBERON:0004290!2.43e-13!70;UBERON:0000486!9.32e-11!82;UBERON:0001134!1.10e-10!61;UBERON:0002036!1.10e-10!61;UBERON:0003082!1.10e-10!61;UBERON:0000914!1.41e-10!83;UBERON:0002329!1.41e-10!83;UBERON:0003077!1.41e-10!83;UBERON:0003059!1.41e-10!83;UBERON:0007282!1.41e-10!83;UBERON:0009618!1.41e-10!83;UBERON:0007285!1.41e-10!83;UBERON:0002385!3.09e-10!63;UBERON:0001015!3.09e-10!63;UBERON:0000383!3.09e-10!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.34e-40;16!UBERON:0002036;3.34e-40;16!UBERON:0002385;1.44e-19;31!UBERON:0001015;1.44e-19;31!UBERON:0000383;1.44e-19;31!UBERON:0001136;3.25e-19;1!UBERON:0001343;3.25e-19;1!UBERON:0004910;3.25e-19;1!UBERON:0004813;3.25e-19;1!UBERON:0004909;2.72e-10;2 | |ontology_enrichment_uberon_v019=UBERON:0001134;3.34e-40;16!UBERON:0002036;3.34e-40;16!UBERON:0002385;1.44e-19;31!UBERON:0001015;1.44e-19;31!UBERON:0000383;1.44e-19;31!UBERON:0001136;3.25e-19;1!UBERON:0001343;3.25e-19;1!UBERON:0004910;3.25e-19;1!UBERON:0004813;3.25e-19;1!UBERON:0004909;2.72e-10;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.25e-19,1;UBERON:0001343,2.25e-19,1;UBERON:0004910,2.25e-19,1;UBERON:0005154,2.25e-19,1;UBERON:0005295,2.25e-19,1;UBERON:0004813,2.25e-19,1;UBERON:0005297,2.25e-19,1;UBERON:0005294,2.25e-19,1;UBERON:0010141,2.25e-19,1;UBERON:0005891,2.25e-19,1;UBERON:0004909,2.27e-10,2;UBERON:0001134,2.71e-10,62;UBERON:0002036,2.71e-10,62;UBERON:0003082,2.71e-10,62;UBERON:0002385,5.74e-10,64;UBERON:0001015,5.74e-10,64;UBERON:0000383,5.74e-10,64;UBERON:0002329,5.74e-09,71;UBERON:0003059,5.74e-09,71;UBERON:0007282,5.74e-09,71;UBERON:0004290,5.74e-09,71;UBERON:0009618,5.74e-09,71;UBERON:0003077,7.70e-09,72;UBERON:0007285,7.70e-09,72;UBERON:0007524,1.02e-08,73;UBERON:0007503,3.82e-08,78;UBERON:0000486,1.22e-07,83;UBERON:0005256,7.13e-07,122 | |||
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| ||
|short_description=p@chr13:94958055..94958072,+ | |short_description=p@chr13:94958055..94958072,+ | ||
}} | }} |
Latest revision as of 17:29, 24 July 2015
Short description: | p@chr13:94958055..94958072, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:94958055..94958072, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle satellite cell | 1.51e-54 | 3 |
cell of skeletal muscle | 9.35e-50 | 9 |
androgen binding protein secreting cell | 2.25e-19 | 1 |
seminiferous tubule epithelial cell | 2.25e-19 | 1 |
Sertoli cell | 2.25e-19 | 1 |
muscle precursor cell | 5.15e-11 | 58 |
myoblast | 5.15e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.15e-11 | 58 |
fibroblast of lymphatic vessel | 2.49e-10 | 2 |
mesenchymal stem cell of adipose | 3.68e-10 | 8 |
muscle cell | 2.87e-08 | 55 |
electrically responsive cell | 1.86e-07 | 61 |
electrically active cell | 1.86e-07 | 61 |
mesodermal cell | 6.20e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 2.25e-19 | 1 |
seminiferous tubule of testis | 2.25e-19 | 1 |
epithelium of male gonad | 2.25e-19 | 1 |
epithelial cord | 2.25e-19 | 1 |
sex cord | 2.25e-19 | 1 |
seminiferous tubule epithelium | 2.25e-19 | 1 |
testis sex cord | 2.25e-19 | 1 |
genital ridge | 2.25e-19 | 1 |
primitive sex cord of indifferent gonad | 2.25e-19 | 1 |
coelomic epithelium | 2.25e-19 | 1 |
epithelium of gonad | 2.27e-10 | 2 |
skeletal muscle tissue | 2.71e-10 | 62 |
striated muscle tissue | 2.71e-10 | 62 |
myotome | 2.71e-10 | 62 |
muscle tissue | 5.74e-10 | 64 |
musculature | 5.74e-10 | 64 |
musculature of body | 5.74e-10 | 64 |
somite | 5.74e-09 | 71 |
presomitic mesoderm | 5.74e-09 | 71 |
presumptive segmental plate | 5.74e-09 | 71 |
dermomyotome | 5.74e-09 | 71 |
trunk paraxial mesoderm | 5.74e-09 | 71 |
paraxial mesoderm | 7.70e-09 | 72 |
presumptive paraxial mesoderm | 7.70e-09 | 72 |
dense mesenchyme tissue | 1.02e-08 | 73 |
epithelial vesicle | 3.82e-08 | 78 |
multilaminar epithelium | 1.22e-07 | 83 |
trunk mesenchyme | 7.13e-07 | 122 |