FFCP PHASE1:Hg19::chr14:23039150..23039173,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:23039150..23039173,- to FFCP PHASE1:Hg19::chr14:23039150..23039173,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:23039150..23039173,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_at_chr14:23039150..23039173,- | |||
|id=chr14:23039150..23039173,- | |||
|ontology_enrichment_celltype=CL:0000838!7.37e-65!52;CL:0000542!2.40e-63!53;CL:0000051!2.40e-63!53;CL:0000791!8.45e-33!18;CL:0000789!8.45e-33!18;CL:0002420!8.45e-33!18;CL:0002419!8.45e-33!18;CL:0000790!8.45e-33!18;CL:0000738!1.26e-31!140;CL:0000037!5.96e-31!172;CL:0000566!5.96e-31!172;CL:0000945!9.43e-31!24;CL:0000826!9.43e-31!24;CL:0002087!7.88e-30!119;CL:0000084!7.99e-30!25;CL:0000827!7.99e-30!25;CL:0000988!3.49e-28!182;CL:0002032!8.18e-26!165;CL:0000837!8.18e-26!165;CL:0002031!2.41e-25!124;CL:0000625!4.69e-21!11;CL:0000236!4.86e-19!14;CL:0000624!7.73e-12!6;CL:0000898!5.63e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.35e-58;18!CL:0000789;1.35e-58;18!CL:0002419;1.35e-58;18!CL:0000084;5.42e-41;25!CL:0000625;1.72e-34;11!CL:0000542;4.10e-30;53!CL:0000624;2.09e-22;6!CL:0000945;1.49e-13;24!CL:0000898;2.11e-12;3!CL:0000236;8.13e-10;13!CL:0000815;7.85e-09;2!CL:0000792;7.85e-09;2!CL:0002677;7.85e-09;2!CL:0002087;1.02e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.05e-59,18;CL:0000789,8.05e-59,18;CL:0002420,8.05e-59,18;CL:0002419,8.05e-59,18;CL:0000790,8.05e-59,18;CL:0000838,1.50e-50,52;CL:0000542,1.83e-49,53;CL:0000051,1.83e-49,53;CL:0000084,3.77e-41,25;CL:0000827,3.77e-41,25;CL:0000625,9.21e-35,11;CL:0000624,1.67e-22,6;CL:0002087,1.99e-20,115;CL:0000738,4.43e-19,136;CL:0002031,9.13e-18,120;CL:0000037,4.52e-14,168;CL:0000945,1.92e-13,24;CL:0000826,1.92e-13,24;CL:0000988,5.42e-13,177;CL:0002032,1.18e-12,161;CL:0000837,1.18e-12,161;CL:0000898,1.33e-12,3;CL:0000236,4.93e-09,14;CL:0000815,6.22e-09,2;CL:0000792,6.22e-09,2;CL:0002677,6.22e-09,2;CL:0000893,1.91e-08,2;CL:0002489,1.91e-08,2;CL:0000809,1.91e-08,2;CL:0000808,1.91e-08,2;CL:0000894,1.91e-08,2;CL:0000806,1.91e-08,2;CL:0000807,1.91e-08,2;CL:0000805,1.91e-08,2;CL:0002425,1.91e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.35e-58;18!CL:0000051;4.10e-30;53!CL:0002425;1.67e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!2.99e-10!10;DOID:2531!6.86e-07!51;DOID:0060083!6.86e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!7.12e-12!7;UBERON:0000178!2.23e-10!15;UBERON:0000179!2.23e-10!15;UBERON:0000463!2.23e-10!15;UBERON:0002370!2.26e-08!4;UBERON:0005058!2.26e-08!4;UBERON:0009113!2.26e-08!4;UBERON:0003295!2.26e-08!4;UBERON:0005562!2.26e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.67e-08;2!UBERON:0005058;1.67e-08;2!UBERON:0009113;1.67e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.94e-15,4;UBERON:0005058,1.94e-15,4;UBERON:0009113,1.94e-15,4;UBERON:0003295,1.94e-15,4;UBERON:0005562,1.94e-15,4;UBERON:0003351,2.52e-10,6;UBERON:0004177,7.37e-09,7;UBERON:0005057,7.37e-09,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45185470921107,0.738905305049512,0.944529375764151,0.786728553697808,1.15148819429164,0.154816123316076,0,0,0,2.09161441566814,1.13735385989937,0.293600439334847,0,0.601633342410425,0.868043482863407,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0.889509253863555,0.853460445133014,2.00197993518006,0.574752439954483,3.30522436392431,0,1.1384259382189,0.587237189370939,1.52909291250092,0,0.560508562981536,0,1.57367816091066,2.35806457649499,1.02800749499755,4.84840836632966,2.93330039970231,10.4158517261641,3.89653456815823,3.89936599098108,2.3568472597987,3.1014745241707,0.812411591295047,2.30564375506215,3.12142434143708,2.46656856905514,4.97430032014527,2.60822777161547,1.63115219478266,2.40786745280742,2.09071047609954,1.92625882585863,2.68254345521345,4.81078423675682,2.02415753615602,4.14135038621326,5.85975108470777,2.85135613334512,2.86092726247768,3.19966527886046,1.24930726552346,4.02521328474829,4.10563998460523,2.41928091869679,0.802320587350522,1.73789284659359,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352193736052904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,0.985153801009636,1.07813787429759,0.641715181398742,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.2942852049117,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,1.13929437434833,2.62054953003568,0.822724546172388,0,1.08006287447623,0.79312517629427,0,0,0,0,0.144269212976445,0.497992903438899,0,0.199579371432817,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0.270455678475983,0,0,0,0,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,1.10776324914963,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0.599646935549574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0,0,0,0,0,0,1.80848947540817,2.48298857183432,0,0,0,0.217716747896961,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45185470921107,0.738905305049512,0.944529375764151,0.786728553697808,1.15148819429164,0.154816123316076,0,0,0,2.09161441566814,1.13735385989937,0.293600439334847,0,0.601633342410425,0.868043482863407,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0.889509253863555,0.853460445133014,2.00197993518006,0.574752439954483,3.30522436392431,0,1.1384259382189,0.587237189370939,1.52909291250092,0,0.560508562981536,0,1.57367816091066,2.35806457649499,1.02800749499755,4.84840836632966,2.93330039970231,10.4158517261641,3.89653456815823,3.89936599098108,2.3568472597987,3.1014745241707,0.812411591295047,2.30564375506215,3.12142434143708,2.46656856905514,4.97430032014527,2.60822777161547,1.63115219478266,2.40786745280742,2.09071047609954,1.92625882585863,2.68254345521345,4.81078423675682,2.02415753615602,4.14135038621326,5.85975108470777,2.85135613334512,2.86092726247768,3.19966527886046,1.24930726552346,4.02521328474829,4.10563998460523,2.41928091869679,0.802320587350522,1.73789284659359,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352193736052904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,0.985153801009636,1.07813787429759,0.641715181398742,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.2942852049117,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,1.13929437434833,2.62054953003568,0.822724546172388,0,1.08006287447623,0.79312517629427,0,0,0,0,0.144269212976445,0.497992903438899,0,0.199579371432817,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0.270455678475983,0,0,0,0,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,1.10776324914963,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0.599646935549574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0,0,0,0,0,0,1.80848947540817,2.48298857183432,0,0,0,0.217716747896961,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0.320568492303233 | ||
|short_description=p@chr14:23039150..23039173,- | |||
}} | }} |
Latest revision as of 19:16, 24 July 2015
Short description: | p@chr14:23039150..23039173, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:23039150..23039173, - |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.94e-15 | 4 |
hemolymphoid system gland | 1.94e-15 | 4 |
thymic region | 1.94e-15 | 4 |
pharyngeal gland | 1.94e-15 | 4 |
thymus primordium | 1.94e-15 | 4 |
pharyngeal epithelium | 2.52e-10 | 6 |
hemopoietic organ | 7.37e-09 | 7 |
immune organ | 7.37e-09 | 7 |