FFCP PHASE1:Hg19::chr15:41136563..41136613,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:41136563..41136613,- | |||
|coexpression_cluster_id=C1727 | |||
|description=CAGE_peak_at_chr15:41136563..41136613,- | |description=CAGE_peak_at_chr15:41136563..41136613,- | ||
|id=chr15:41136563..41136613,- | |id=chr15:41136563..41136613,- | ||
|ontology_enrichment_celltype=CL:0000066!4.27e-21!254;CL:0002076!2.44e-14!43;CL:0000223!7.23e-10!59;CL:0002251!2.91e-07!21;CL:0002368!5.47e-07!13 | |ontology_enrichment_celltype=CL:0000066!4.27e-21!254;CL:0002076!2.44e-14!43;CL:0000223!7.23e-10!59;CL:0002251!2.91e-07!21;CL:0002368!5.47e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.89e-14;42!CL:0002368;1.20e-09;13!CL:0002251;1.04e-08;20!CL:1000497;1.67e-07;17!CL:0002518;1.67e-07;17!CL:1000449;2.05e-07;15!CL:0002159;2.73e-07;14!CL:1000507;3.32e-07;10!CL:1000494;3.32e-07;10!CL:0002202;6.57e-07;9!CL:0002632;6.57e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.57e-25,253;CL:0002076,9.67e-19,42;CL:0000223,3.43e-13,58;CL:0002368,1.18e-09,13;CL:0002251,1.20e-08,20;CL:1000497,1.95e-07,17;CL:0002518,1.95e-07,17;CL:1000449,2.47e-07,15;CL:0002159,2.89e-07,14;CL:1000507,3.78e-07,10;CL:1000494,3.78e-07,10;CL:0002202,5.89e-07,9;CL:0002632,5.89e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;2.92e-07;58 | |||
|ontology_enrichment_disease=DOID:305!1.58e-12!106;DOID:0050687!6.02e-09!143;DOID:1749!8.94e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.88e-12;14!DOID:299;6.62e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.07e-14,106;DOID:1749,7.15e-12,14;DOID:0050687,2.78e-09,143;DOID:299,6.28e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.53e-13!169;UBERON:0000925!1.53e-13!169;UBERON:0006595!1.53e-13!169;UBERON:0000464!1.04e-10!104;UBERON:0001007!4.97e-10!155;UBERON:0001555!4.97e-10!155;UBERON:0007026!4.97e-10!155;UBERON:0001008!1.18e-09!45;UBERON:0004921!1.39e-09!129;UBERON:0004185!1.39e-09!129;UBERON:0001004!1.45e-09!72;UBERON:0006554!2.11e-09!44;UBERON:0000466!1.82e-08!126;UBERON:0000077!3.05e-08!130;UBERON:0005153!4.62e-08!37;UBERON:0000058!1.06e-07!26;UBERON:0005177!3.28e-07!107;UBERON:0005181!5.27e-07!35;UBERON:0005911!5.91e-07!82;UBERON:0000489!7.46e-07!32;UBERON:0005178!8.11e-07!34;UBERON:0002224!8.11e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.79e-10;33!UBERON:0006554;5.35e-10;30!UBERON:0001008;5.35e-10;30!UBERON:0005178;1.85e-08;34!UBERON:0002224;1.85e-08;34!UBERON:0005181;9.00e-08;35!UBERON:0005911;9.80e-08;36!UBERON:0004807;1.46e-07;22!UBERON:0001555;1.84e-07;54!UBERON:0006555;2.05e-07;15!UBERON:0004819;2.05e-07;15!UBERON:0001285;2.05e-07;15!UBERON:0007684;2.05e-07;15!UBERON:0005409;2.47e-07;22!UBERON:0002048;2.91e-07;22!UBERON:0000117;2.91e-07;22!UBERON:0000171;2.91e-07;22!UBERON:0000170;2.91e-07;22!UBERON:0004211;3.32e-07;10!UBERON:0009773;3.32e-07;10!UBERON:0001231;3.32e-07;10!UBERON:0004810;3.32e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.25e-22,160;UBERON:0000925,1.25e-22,160;UBERON:0006595,1.25e-22,160;UBERON:0001007,4.64e-17,145;UBERON:0001555,4.64e-17,145;UBERON:0007026,4.64e-17,145;UBERON:0001008,1.68e-15,48;UBERON:0006554,3.89e-15,47;UBERON:0004921,7.01e-15,118;UBERON:0001004,2.16e-12,74;UBERON:0005153,2.59e-11,37;UBERON:0005911,5.76e-11,82;UBERON:0005177,6.34e-10,101;UBERON:0005178,1.63e-09,34;UBERON:0002224,1.63e-09,34;UBERON:0005157,2.80e-09,47;UBERON:0000065,3.61e-09,54;UBERON:0005181,4.78e-09,35;UBERON:0000161,4.96e-09,36;UBERON:0005631,1.77e-08,14;UBERON:0000158,1.77e-08,14;UBERON:0006555,3.48e-08,16;UBERON:0004819,3.48e-08,16;UBERON:0009569,4.69e-08,112;UBERON:0000915,7.43e-08,52;UBERON:0001041,8.00e-08,87;UBERON:0002113,9.94e-08,26;UBERON:0003918,9.94e-08,26;UBERON:0011143,9.94e-08,26;UBERON:0005095,9.94e-08,26;UBERON:0007687,9.94e-08,26;UBERON:0000489,2.41e-07,31;UBERON:0004211,2.47e-07,15;UBERON:0009773,2.47e-07,15;UBERON:0001231,2.47e-07,15;UBERON:0001285,2.47e-07,15;UBERON:0007684,2.47e-07,15;UBERON:0004208,2.47e-07,15;UBERON:0002048,2.86e-07,22;UBERON:0000117,2.86e-07,22;UBERON:0000171,2.86e-07,22;UBERON:0000170,2.86e-07,22;UBERON:0005597,2.86e-07,22;UBERON:0000118,2.86e-07,22;UBERON:0004810,3.78e-07,10;UBERON:0004807,4.16e-07,28;UBERON:0004175,6.20e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,5.6518805395347,23.7252397110625,10.4851858622483,9.75937819445278,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0.534893840235659,0.903106483949403,0.787107813136792,0,0,0.619264493264304,8.27479102031034,5.72291245678675,8.8740962440029,0,0,0.880801318004542,1.10799081706375,0,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0.211255286311942,0,0,0.112328631146495,0.300353785683013,0.48217676009124,0,0,0.182664153764634,5.27988733383968,2.18455444504853,1.77901850772711,1.28019066769952,2.80277190925209,1.72425731986345,3.96626923670917,2.86216126360609,0.569212969109448,0.587237189370939,1.14681968437569,2.64342657158052,0.560508562981536,0.263384084775077,0.196709770113833,0.786021525498329,0,1.00311897234407,0.651844533267181,0.473447805734733,0,0.891283655081389,0.294605907474837,0.664601683750863,0.270803863765016,0.128091319725675,0.650296737799391,0.493313713811028,1.10540007114339,0,0.14828656316206,0,0,0.453237370790265,1.14966148080576,0,0,0.95569624297229,0,0,0,0.511946444617674,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.144824403882799,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.472674085820339,0.665188192387692,1.05401742831751,3.6019245761871,22.2220125858451,12.6066710546706,2.27183175558278,2.08955684759121,2.12732736830184,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.488124115096339,0,0,0,0.22452937262617,0,0,0,0,0,0,8.28578699070815,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,8.11695583285847,4.90943017063502,8.03052867089211,2.92736894711029,3.5783037446801,3.36962434321603,2.798848485415,3.5324919122588,2.55484151353081,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,8.36321382093172,0.686271241194102,5.26801369961403,10.1161577931858,7.13755704122579,7.03672183204825,0,0,0,0.34779121492523,0.234817388471643,0.433099343283221,0,0,13.4334747653077,12.8772924314231,0.738651018262192,1.8720341211139,1.48631162288728,11.2480600784132,6.2153387433578,6.66342957039216,6.17953806649653,7.55648240136301,12.651628412452,0,0.088048434013226,0.207328115540772,0.432359860250884,0.88369703398466,0,0,0,0,0,0.600686115687835,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,10.6094650006191,3.32870879020994,6.95497674658265,0,0,0,0,0,0,0,0,0,0,0,0,4.47179963489002,7.01772646061497,11.510123616987,0,0,0,6.76799419361118,2.69553679865452,6.27479815341484,1.46139224653261,2.11103257785751,1.13733384070897,0,0.647747748306418,3.08454505380579,3.25135725052623,5.01689773854853,3.05851527654046,14.1282921517883,3.80587083027703,0,0,0,0.656029291399411,0.325378394664303,3.09123034943167,0,0,7.46545199395024,9.1008434445113,0,0,0,0,0,0,0,0,0,6.44611169907815,6.91884242514382,2.04180339991335,12.138933702666,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,7.12043634168789,7.37332503089366,15.2447378805852,4.42475863650862,12.0541504347944,10.1082885400575,13.7463347596369,5.97280840538095,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,15.437533606805,0,0.721346064882224,0,0,0,1.1490322207942,0,0,0,0,0,0,0,0,0,1.27753871307098,0,0,0,0,0,0,0,0,0,0,17.029789177148,0.146508179271894,0,0,0,9.31103490476991,19.5996689349541,23.6513740616409,0,0,0,0,2.95575571379191,1.9924798825107,4.14425873296722,2.26739473068848,1.02268682502155,0.861593638227486,0,13.5701210232464,18.2601598169121,0,1.87422470710174,0,0,0,0.185536196323703,0,13.2818158153469,36.1209799984288,5.79999660347835,7.16898724198648,13.7296971158094,21.9840544044181,1.03423011972439,0,0,0,0.120596438625408,0,0.774054819518572,0.295547618953547,0.219385397153973,0,10.3173570766166,3.61666214967846,0,4.6112780877612,2.33369875465408,15.2106320690811,3.82801391678303,2.74792780205587,4.26427820814908,0,0,0.664846727600626,0.451191321234361,0.19606253431774,0.167821586975843,0.189753732724185,0.476809736941136,0,6.20284671004761,6.2195351430934,0,12.9384051040206,10.7918228694074,18.3309043480088,0,0,0,0.067401132980677,0.802577647298789,0,0,9.39190170874031,0,22.4913109624153,8.46935012340647,0,0,0.150323419414493,0.311064574191741,0,0,0,0,6.83062910471503,0,10.4135843001079,8.52533857505085,6.61649970011059,12.0561401087001,0,0,0,0,9.11696754991143,0.264768380074501,3.16373037092745,0,0,0,14.861905087845,4.56905275433742,8.1112138000954,0.39961921916426,9.22178669786278,0,0,0.14405479798815,0.869767748958028,12.4917838346902,0,0,0,0.288950589901519,0,0,0,0,0.525774708558629,0,0.229160424011684,0,4.193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| ||
|short_description=p@chr15:41136563..41136613,- | |short_description=p@chr15:41136563..41136613,- | ||
}} | }} |
Latest revision as of 01:32, 25 July 2015
Short description: | p@chr15:41136563..41136613, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:41136563..41136613, - |
Coexpression cluster: | C1727_colon_small_stomach_papillotubular_breast_duodenum_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.57e-25 | 253 |
endo-epithelial cell | 9.67e-19 | 42 |
endodermal cell | 3.43e-13 | 58 |
respiratory epithelial cell | 1.18e-09 | 13 |
epithelial cell of alimentary canal | 1.20e-08 | 20 |
kidney cell | 1.95e-07 | 17 |
kidney epithelial cell | 1.95e-07 | 17 |
epithelial cell of nephron | 2.47e-07 | 15 |
general ecto-epithelial cell | 2.89e-07 | 14 |
kidney tubule cell | 3.78e-07 | 10 |
nephron tubule epithelial cell | 3.78e-07 | 10 |
epithelial cell of tracheobronchial tree | 5.89e-07 | 9 |
epithelial cell of lower respiratory tract | 5.89e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.07e-14 | 106 |
squamous cell carcinoma | 7.15e-12 | 14 |
cell type cancer | 2.78e-09 | 143 |
adenocarcinoma | 6.28e-07 | 25 |