FFCP PHASE1:Hg19::chr15:44831947..44831951,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:44831947..44831951,+ | |||
|description=CAGE_peak_at_chr15:44831947..44831951,+ | |description=CAGE_peak_at_chr15:44831947..44831951,+ | ||
|id=chr15:44831947..44831951,+ | |id=chr15:44831947..44831951,+ | ||
|ontology_enrichment_celltype=CL:0000037!9.46e-13!172;CL:0000566!9.46e-13!172;CL:0000988!1.15e-11!182;CL:0002032!2.17e-11!165;CL:0000837!2.17e-11!165;CL:0000738!2.70e-11!140;CL:0002031!7.20e-10!124;CL:0002087!1.13e-09!119;CL:0000860!2.74e-07!45;CL:0002057!7.22e-07!42 | |ontology_enrichment_celltype=CL:0000037!9.46e-13!172;CL:0000566!9.46e-13!172;CL:0000988!1.15e-11!182;CL:0002032!2.17e-11!165;CL:0000837!2.17e-11!165;CL:0000738!2.70e-11!140;CL:0002031!7.20e-10!124;CL:0002087!1.13e-09!119;CL:0000860!2.74e-07!45;CL:0002057!7.22e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.07e-12;18!CL:0000789;6.07e-12;18!CL:0002419;6.07e-12;18!CL:0002393;3.66e-10;6!CL:0002397;3.66e-10;6!CL:0000624;9.10e-10;6!CL:0000775;2.06e-09;3!CL:0000623;2.75e-09;3!CL:0000226;7.00e-09;3!CL:0000842;7.00e-09;3!CL:0000084;1.94e-08;25!CL:0002032;2.82e-07;1!CL:0000557;2.82e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.00e-13,168;CL:0000988,3.86e-12,177;CL:0000791,5.46e-12,18;CL:0000789,5.46e-12,18;CL:0002420,5.46e-12,18;CL:0002419,5.46e-12,18;CL:0000790,5.46e-12,18;CL:0002032,5.13e-11,161;CL:0000837,5.13e-11,161;CL:0000738,7.20e-11,136;CL:0002087,2.67e-10,115;CL:0000624,7.27e-10,6;CL:0000775,1.90e-09,3;CL:0000623,2.33e-09,3;CL:0000825,2.33e-09,3;CL:0000226,7.01e-09,3;CL:0000842,7.01e-09,3;CL:0000084,1.80e-08,25;CL:0000827,1.80e-08,25;CL:0000838,2.94e-08,52;CL:0000542,4.48e-08,53;CL:0000051,4.48e-08,53;CL:0002031,3.09e-07,120;CL:0002393,6.17e-07,9;CL:0002397,6.17e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;6.07e-12;18!UBERON:0005425;2.82e-07;1 | |||
|ontology_enrichment_disease=DOID:162!1.47e-09!235;DOID:0050687!6.30e-09!143;DOID:14566!6.62e-09!239;DOID:305!1.80e-07!106 | |ontology_enrichment_disease=DOID:162!1.47e-09!235;DOID:0050687!6.30e-09!143;DOID:14566!6.62e-09!239;DOID:305!1.80e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.82e-07;1!UBERON:0001785;2.82e-07;1!UBERON:0002464;2.82e-07;1!UBERON:0004904;2.82e-07;1!UBERON:0001021;2.82e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.07e-07,1;UBERON:0001785,2.07e-07,1;UBERON:0002464,2.07e-07,1;UBERON:0004904,2.07e-07,1;UBERON:0001021,2.07e-07,1;UBERON:0003902,2.07e-07,1;UBERON:0005425,2.07e-07,1 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0.0764134057479513,0,0.314843125254717,0,0,0.619264493264304,0,0,0,0,0.568676929949686,0,2.76997704265939,3.20871115952227,2.38711957787437,0.447830948479849,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.697287110717054,0,0.619412741790207,0.575384784644301,0.256160706529101,0.236482229888585,0,0.645484683583826,1.35426486594342,0.941211697713023,0.272906150057846,0.449446968890169,0,0.320929027076094,0.639337125799041,0,0.598390972864896,0,0.580418477257168,0,0,1.00499466102697,0.521482918420201,0.434377689410233,0,0,0.316462387440884,0.211255286311942,0.637812899895131,0.209658645508376,0.673971786878971,0,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0.569212969109448,0,2.29363936875137,0,1.68152568894461,0,1.180258620683,3.53709686474248,1.85041349099558,0.167186495390678,0,0.473447805734733,0,0.222820913770347,0.294605907474837,0.886135578334485,0,0.128091319725675,0.260118695119756,0.164437904603676,0.552700035571697,0,0.296573126324121,0.267540828089713,0,0.453237370790265,0.383220493601921,0.34362744548263,0,0.318565414324097,0,0,0,0,0,0,0.821127996921047,2.01606743224732,2.94184215361858,2.31719046212478,2.43806866313962,0,0,0,0,0,0,0.486634870302636,0,0.443458794925128,0,0.130979075497713,0,0,0,0,0,0.476981248610684,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.732186172644509,0,0,0.0892997282840798,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,0.397227542439656,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0.61417158655884,0.103325781175765,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0.506328996723799,0,0.504867548488229,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.245976877086227,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0.414656231081544,0.432359860250884,0.75745460055828,0.063497894292169,0,0,0,0,0.300343057843917,0,0.224262168690721,0,0,0.517086863031111,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.710783897485092,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.358121926479791,0.112085143993527,0.788123040807709,4.09692392233083,1.41177339907723,0.254094624222463,2.60279707715243,0,0,0,2.24702107184155,2.99161459204025,0,0,0,0,0.415941723061614,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,1.03384013061444,1.50999940573032,0.533637789017222,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0,0,0.200506470303285,0.0920809889358963,0.229628896329213,0.728364672026868,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0.328014645699706,0,0.103041011647722,0.27470839445503,0.165018999841176,0,0,0,0.193341436584244,0,0,0.137836572484531,0.214840489736547,0.145016693914229,0,0.0890320356467374,0.165284915360978,0,0.638063562472921,0.2023155617111,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0,0,0,0,0,0,0,0,0.707027159768564,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0.213648142254946,0,0.735120647943095,0.185803175125719,0.144269212976445,0.284567373393656,0.159426272728822,0,0.191505370132367,0.423347165447766,0,0,0.912938716132769,0,0,0,0.481764225311099,1.00899853595524,0.425846237690326,0.343505344755765,0,0,0.166849141711909,0,0,0,0.270455678475983,0.33307196799782,1.4098700508785,0,0.146508179271894,0,0.66866030566487,0.568272293612826,0.47748896947538,0,0,0.994147647766298,0.281338832821026,0.222617410045812,0.16480387422676,1.26675244876796,0,0.276283915531148,0.503865495708552,0.409074730008619,0.861593638227486,0,0.629078458031288,1.07412704805365,1.02314474045374,0,0,0,0,0.185536196323703,0,0.520855522170466,0,0,0.227586896570999,0.254253650292766,0.472775363535873,1.03423011972439,2.04123229368278,0.347249989866585,0,0,0,0.110579259931225,0.591095237907095,0,0.21787692703798,0.278847488557207,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0.31396051279005,0,0.225595660617181,0.784250137270958,0,0.569261198172555,0,0.632994193584081,0.326465616318295,0.282706142867882,0.432777279484182,0,0.176915129006678,0,0.593042257361244,0.247127877893006,0.313265848516366,0.067401132980677,0,0.234264445725339,0.364909578431332,0.391329237864179,0,0,0,0,0.126373159256976,0,0,0,0.330991955875499,0.313932918407225,0,0,0.277349346026277,0,0.195984794828755,0.174118413160805,0,0,0.193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| ||
|short_description=p@chr15:44831947..44831951,+ | |short_description=p@chr15:44831947..44831951,+ | ||
}} | }} |
Latest revision as of 01:54, 25 July 2015
Short description: | p@chr15:44831947..44831951, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:44831947..44831951, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.00e-13 | 168 |
hematopoietic cell | 3.86e-12 | 177 |
mature alpha-beta T cell | 5.46e-12 | 18 |
alpha-beta T cell | 5.46e-12 | 18 |
immature T cell | 5.46e-12 | 18 |
mature T cell | 5.46e-12 | 18 |
immature alpha-beta T cell | 5.46e-12 | 18 |
hematopoietic oligopotent progenitor cell | 5.13e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.13e-11 | 161 |
leukocyte | 7.20e-11 | 136 |
nongranular leukocyte | 2.67e-10 | 115 |
CD4-positive, alpha-beta T cell | 7.27e-10 | 6 |
neutrophil | 1.90e-09 | 3 |
natural killer cell | 2.33e-09 | 3 |
pro-NK cell | 2.33e-09 | 3 |
single nucleate cell | 7.01e-09 | 3 |
mononuclear cell | 7.01e-09 | 3 |
T cell | 1.80e-08 | 25 |
pro-T cell | 1.80e-08 | 25 |
lymphoid lineage restricted progenitor cell | 2.94e-08 | 52 |
lymphocyte | 4.48e-08 | 53 |
common lymphoid progenitor | 4.48e-08 | 53 |
hematopoietic lineage restricted progenitor cell | 3.09e-07 | 120 |
intermediate monocyte | 6.17e-07 | 9 |
CD14-positive, CD16-positive monocyte | 6.17e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.07e-07 | 1 |
cranial nerve | 2.07e-07 | 1 |
nerve trunk | 2.07e-07 | 1 |
nerve connecting eye with brain | 2.07e-07 | 1 |
nerve | 2.07e-07 | 1 |
retinal neural layer | 2.07e-07 | 1 |
presumptive neural retina | 2.07e-07 | 1 |