FFCP PHASE1:Hg19::chr16:16214258..16214297,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:16214258..16214297,- | |||
|description=CAGE_peak_at_chr16:16214258..16214297,- | |description=CAGE_peak_at_chr16:16214258..16214297,- | ||
|id=chr16:16214258..16214297,- | |id=chr16:16214258..16214297,- | ||
|ontology_enrichment_celltype=CL:0002274!5.20e-14!5;CL:0000457!5.20e-14!5;CL:0002191!5.20e-14!5;CL:0000097!5.20e-14!5;CL:0000831!5.20e-14!5;CL:0002028!5.20e-14!5;CL:0000163!1.45e-11!9;CL:0000077!6.79e-07!19 | |ontology_enrichment_celltype=CL:0002274!5.20e-14!5;CL:0000457!5.20e-14!5;CL:0002191!5.20e-14!5;CL:0000097!5.20e-14!5;CL:0000831!5.20e-14!5;CL:0002028!5.20e-14!5;CL:0000163!1.45e-11!9;CL:0000077!6.79e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.35e-33;5!CL:0000037;9.82e-20;1!CL:0001024;9.82e-20;1!CL:0000163;7.01e-19;9!CL:0000047;2.99e-10;2!CL:0000767;2.97e-07;3 | |ontology_enrichment_celltype_v019=CL:0000097;2.35e-33;5!CL:0000037;9.82e-20;1!CL:0001024;9.82e-20;1!CL:0000163;7.01e-19;9!CL:0000047;2.99e-10;2!CL:0000767;2.97e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.23e-33,5;CL:0002028,2.23e-33,5;CL:0001024,1.08e-19,1;CL:0000163,6.80e-19,9;CL:0000767,2.63e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.71e-19;1!UBERON:0003056;2.25e-07;3 | |ontology_enrichment_development_v019=UBERON:0005425;1.71e-19;1!UBERON:0003056;2.25e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000941;1.71e-19;1!UBERON:0001785;1.71e-19;1!UBERON:0002464;1.71e-19;1!UBERON:0004904;1.71e-19;1!UBERON:0001021;1.71e-19;1!UBERON:0002038;3.91e-19;1!UBERON:0009661;3.91e-19;1!UBERON:0002950;3.91e-19;1!UBERON:0001891;3.91e-19;1!UBERON:0003714;1.97e-10;2!UBERON:0005162;1.97e-10;2!UBERON:0000122;1.97e-10;2 | |ontology_enrichment_uberon_v019=UBERON:0000941;1.71e-19;1!UBERON:0001785;1.71e-19;1!UBERON:0002464;1.71e-19;1!UBERON:0004904;1.71e-19;1!UBERON:0001021;1.71e-19;1!UBERON:0002038;3.91e-19;1!UBERON:0009661;3.91e-19;1!UBERON:0002950;3.91e-19;1!UBERON:0001891;3.91e-19;1!UBERON:0003714;1.97e-10;2!UBERON:0005162;1.97e-10;2!UBERON:0000122;1.97e-10;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.56e-19,1;UBERON:0001785,1.56e-19,1;UBERON:0002464,1.56e-19,1;UBERON:0004904,1.56e-19,1;UBERON:0001021,1.56e-19,1;UBERON:0003902,1.56e-19,1;UBERON:0005425,1.56e-19,1;UBERON:0002038,4.69e-19,1;UBERON:0009661,4.69e-19,1;UBERON:0002950,4.69e-19,1;UBERON:0001891,4.69e-19,1;UBERON:0009616,4.69e-19,1;UBERON:0010286,4.69e-19,1;UBERON:0003714,1.89e-10,2;UBERON:0005162,1.89e-10,2;UBERON:0000122,1.89e-10,2 | |||
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| ||
|short_description=p@chr16:16214258..16214297,- | |short_description=p@chr16:16214258..16214297,- | ||
}} | }} |
Latest revision as of 06:40, 25 July 2015
Short description: | p@chr16:16214258..16214297, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:16214258..16214297, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.23e-33 | 5 |
basophil mast progenitor cell | 2.23e-33 | 5 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.08e-19 | 1 |
endocrine cell | 6.80e-19 | 9 |
basophil | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.56e-19 | 1 |
cranial nerve | 1.56e-19 | 1 |
nerve trunk | 1.56e-19 | 1 |
nerve connecting eye with brain | 1.56e-19 | 1 |
nerve | 1.56e-19 | 1 |
retinal neural layer | 1.56e-19 | 1 |
presumptive neural retina | 1.56e-19 | 1 |
substantia nigra | 4.69e-19 | 1 |
midbrain nucleus | 4.69e-19 | 1 |
regional part of midbrain | 4.69e-19 | 1 |
midbrain | 4.69e-19 | 1 |
presumptive midbrain | 4.69e-19 | 1 |
midbrain neural tube | 4.69e-19 | 1 |
neural tissue | 1.89e-10 | 2 |
multi cell component structure | 1.89e-10 | 2 |
neuron projection bundle | 1.89e-10 | 2 |