FFCP PHASE1:Hg19::chr16:2041391..2041393,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:2041391..2041393,+ | |||
|coexpression_cluster_id=C123 | |coexpression_cluster_id=C123 | ||
|description=CAGE_peak_at_chr16:2041391..2041393,+ | |description=CAGE_peak_at_chr16:2041391..2041393,+ | ||
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|ontology_enrichment_celltype=CL:0000738!3.08e-37!140;CL:0002087!1.14e-33!119;CL:0002031!9.06e-32!124;CL:0000838!2.80e-30!52;CL:0000988!6.58e-30!182;CL:0000542!1.45e-29!53;CL:0000051!1.45e-29!53;CL:0000037!6.54e-28!172;CL:0000566!6.54e-28!172;CL:0002032!3.75e-25!165;CL:0000837!3.75e-25!165;CL:0000945!9.21e-17!24;CL:0000826!9.21e-17!24;CL:0000080!1.42e-16!6;CL:0002057!1.39e-10!42;CL:0002393!3.07e-10!9;CL:0002397!3.07e-10!9;CL:0000623!3.62e-10!3;CL:0000825!3.62e-10!3;CL:0000860!1.21e-09!45;CL:0000236!1.28e-09!14;CL:0000767!1.57e-09!3;CL:0000084!1.68e-09!25;CL:0000827!1.68e-09!25;CL:0000842!2.27e-09!3;CL:0000791!5.80e-09!18;CL:0000789!5.80e-09!18;CL:0002420!5.80e-09!18;CL:0002419!5.80e-09!18;CL:0000790!5.80e-09!18;CL:0000766!8.26e-08!76;CL:0000624!1.40e-07!6;CL:0000557!1.51e-07!71;CL:0002009!1.55e-07!65;CL:0000224!4.16e-07!4;CL:0000134!4.66e-07!358;CL:0001014!7.67e-07!2;CL:0001016!7.67e-07!2 | |ontology_enrichment_celltype=CL:0000738!3.08e-37!140;CL:0002087!1.14e-33!119;CL:0002031!9.06e-32!124;CL:0000838!2.80e-30!52;CL:0000988!6.58e-30!182;CL:0000542!1.45e-29!53;CL:0000051!1.45e-29!53;CL:0000037!6.54e-28!172;CL:0000566!6.54e-28!172;CL:0002032!3.75e-25!165;CL:0000837!3.75e-25!165;CL:0000945!9.21e-17!24;CL:0000826!9.21e-17!24;CL:0000080!1.42e-16!6;CL:0002057!1.39e-10!42;CL:0002393!3.07e-10!9;CL:0002397!3.07e-10!9;CL:0000623!3.62e-10!3;CL:0000825!3.62e-10!3;CL:0000860!1.21e-09!45;CL:0000236!1.28e-09!14;CL:0000767!1.57e-09!3;CL:0000084!1.68e-09!25;CL:0000827!1.68e-09!25;CL:0000842!2.27e-09!3;CL:0000791!5.80e-09!18;CL:0000789!5.80e-09!18;CL:0002420!5.80e-09!18;CL:0002419!5.80e-09!18;CL:0000790!5.80e-09!18;CL:0000766!8.26e-08!76;CL:0000624!1.40e-07!6;CL:0000557!1.51e-07!71;CL:0002009!1.55e-07!65;CL:0000224!4.16e-07!4;CL:0000134!4.66e-07!358;CL:0001014!7.67e-07!2;CL:0001016!7.67e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000623;3.88e-33;3!CL:0000542;2.04e-17;53!CL:0000236;2.30e-13;13!CL:0000084;2.40e-10;25!CL:0000791;1.60e-09;18!CL:0000789;1.60e-09;18!CL:0002419;1.60e-09;18!CL:0000625;3.78e-09;11!CL:0000945;2.54e-07;24 | |ontology_enrichment_celltype_v019=CL:0000623;3.88e-33;3!CL:0000542;2.04e-17;53!CL:0000236;2.30e-13;13!CL:0000084;2.40e-10;25!CL:0000791;1.60e-09;18!CL:0000789;1.60e-09;18!CL:0002419;1.60e-09;18!CL:0000625;3.78e-09;11!CL:0000945;2.54e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,4.33e-33,3;CL:0000825,4.33e-33,3;CL:0000838,1.33e-27,52;CL:0000542,4.75e-27,53;CL:0000051,4.75e-27,53;CL:0000738,3.71e-15,136;CL:0002087,1.63e-13,115;CL:0002031,7.04e-13,120;CL:0000988,7.17e-13,177;CL:0000236,1.72e-12,14;CL:0000037,7.28e-12,168;CL:0002032,1.03e-10,161;CL:0000837,1.03e-10,161;CL:0000084,2.23e-10,25;CL:0000827,2.23e-10,25;CL:0000791,1.30e-09,18;CL:0000789,1.30e-09,18;CL:0002420,1.30e-09,18;CL:0002419,1.30e-09,18;CL:0000790,1.30e-09,18;CL:0000625,2.90e-09,11;CL:0000945,2.33e-07,24;CL:0000826,2.33e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;2.04e-17;53!UBERON:0005425;1.01e-11;1!CL:0000790;1.60e-09;18 | |ontology_enrichment_development_v019=CL:0000051;2.04e-17;53!UBERON:0005425;1.01e-11;1!CL:0000790;1.60e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.75e-12!102;UBERON:0003061!6.75e-12!102;UBERON:0002193!3.49e-11!112 | |ontology_enrichment_uberon=UBERON:0002390!6.75e-12!102;UBERON:0003061!6.75e-12!102;UBERON:0002193!3.49e-11!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.01e-11;1!UBERON:0001785;1.01e-11;1!UBERON:0002464;1.01e-11;1!UBERON:0004904;1.01e-11;1!UBERON:0001021;1.01e-11;1 | |ontology_enrichment_uberon_v019=UBERON:0000941;1.01e-11;1!UBERON:0001785;1.01e-11;1!UBERON:0002464;1.01e-11;1!UBERON:0004904;1.01e-11;1!UBERON:0001021;1.01e-11;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.19e-11,1;UBERON:0001785,1.19e-11,1;UBERON:0002464,1.19e-11,1;UBERON:0004904,1.19e-11,1;UBERON:0001021,1.19e-11,1;UBERON:0003902,1.19e-11,1;UBERON:0005425,1.19e-11,1 | |||
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| ||
|short_description=p@chr16:2041391..2041393,+ | |short_description=p@chr16:2041391..2041393,+ | ||
}} | }} |
Latest revision as of 06:58, 25 July 2015
Short description: | p@chr16:2041391..2041393, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:2041391..2041393, + |
Coexpression cluster: | C123_CD19_Natural_CD8_CD4_CD14_Peripheral_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 4.33e-33 | 3 |
pro-NK cell | 4.33e-33 | 3 |
lymphoid lineage restricted progenitor cell | 1.33e-27 | 52 |
lymphocyte | 4.75e-27 | 53 |
common lymphoid progenitor | 4.75e-27 | 53 |
leukocyte | 3.71e-15 | 136 |
nongranular leukocyte | 1.63e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 7.04e-13 | 120 |
hematopoietic cell | 7.17e-13 | 177 |
B cell | 1.72e-12 | 14 |
hematopoietic stem cell | 7.28e-12 | 168 |
hematopoietic oligopotent progenitor cell | 1.03e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.03e-10 | 161 |
T cell | 2.23e-10 | 25 |
pro-T cell | 2.23e-10 | 25 |
mature alpha-beta T cell | 1.30e-09 | 18 |
alpha-beta T cell | 1.30e-09 | 18 |
immature T cell | 1.30e-09 | 18 |
mature T cell | 1.30e-09 | 18 |
immature alpha-beta T cell | 1.30e-09 | 18 |
CD8-positive, alpha-beta T cell | 2.90e-09 | 11 |
lymphocyte of B lineage | 2.33e-07 | 24 |
pro-B cell | 2.33e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.19e-11 | 1 |
cranial nerve | 1.19e-11 | 1 |
nerve trunk | 1.19e-11 | 1 |
nerve connecting eye with brain | 1.19e-11 | 1 |
nerve | 1.19e-11 | 1 |
retinal neural layer | 1.19e-11 | 1 |
presumptive neural retina | 1.19e-11 | 1 |