FFCP PHASE1:Hg19::chr16:28319806..28319807,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:28319806..28319807,+
|short_description=p@chr16:28319806..28319807,+
|description=CAGE_peak_at_chr16:28319806..28319807,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:28319806..28319807,+ | |||
|description=CAGE_peak_at_chr16:28319806..28319807,+ | |||
|id=chr16:28319806..28319807,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.37e-07!6;CL:0000031!5.37e-07!6;CL:0000404!5.37e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000625;9.27e-11;11!CL:0000123;1.59e-07;2!CL:0000242;1.59e-07;2!CL:0000791;8.92e-07;18!CL:0000789;8.92e-07;18!CL:0002419;8.92e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,9.13e-11,11;CL:0000242,1.45e-07,2;CL:0000791,8.84e-07,18;CL:0000789,8.84e-07,18;CL:0002420,8.84e-07,18;CL:0002419,8.84e-07,18;CL:0000790,8.84e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.37e-18;3!UBERON:0005425;9.12e-14;1!CL:0000790;8.92e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002426;3.28e-14;1!UBERON:0003831;3.28e-14;1!UBERON:0003898;3.28e-14;1!UBERON:0004830;3.28e-14;1!UBERON:0003830;3.28e-14;1!UBERON:0005175;3.28e-14;1!UBERON:0001774;3.28e-14;1!UBERON:0001103;3.28e-14;1!UBERON:0000941;9.12e-14;1!UBERON:0001785;9.12e-14;1!UBERON:0002464;9.12e-14;1!UBERON:0004904;9.12e-14;1!UBERON:0001021;9.12e-14;1!UBERON:0002037;2.25e-09;6!UBERON:0004732;2.75e-09;13!UBERON:0005090;9.54e-08;2!UBERON:0001630;9.54e-08;2!UBERON:0003714;1.59e-07;2!UBERON:0005162;1.59e-07;2!UBERON:0000122;1.59e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,3.50e-14,1;UBERON:0003831,3.50e-14,1;UBERON:0003898,3.50e-14,1;UBERON:0004830,3.50e-14,1;UBERON:0003830,3.50e-14,1;UBERON:0005175,3.50e-14,1;UBERON:0001774,3.50e-14,1;UBERON:0001103,3.50e-14,1;UBERON:0010084,3.50e-14,1;UBERON:0000941,6.65e-14,1;UBERON:0001785,6.65e-14,1;UBERON:0002464,6.65e-14,1;UBERON:0004904,6.65e-14,1;UBERON:0001021,6.65e-14,1;UBERON:0003902,6.65e-14,1;UBERON:0005425,6.65e-14,1;UBERON:0002037,1.83e-09,6;UBERON:0006215,1.83e-09,6;UBERON:0004732,2.23e-09,13;UBERON:0005090,9.87e-08,2;UBERON:0001630,9.87e-08,2;UBERON:0003714,1.36e-07,2;UBERON:0005162,1.36e-07,2;UBERON:0000122,1.36e-07,2 | |||
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| ||
|short_description=p@chr16:28319806..28319807,+ | |||
}} | }} |
Latest revision as of 07:38, 25 July 2015
Short description: | p@chr16:28319806..28319807, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:28319806..28319807, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 9.13e-11 | 11 |
Merkel cell | 1.45e-07 | 2 |
mature alpha-beta T cell | 8.84e-07 | 18 |
alpha-beta T cell | 8.84e-07 | 18 |
immature T cell | 8.84e-07 | 18 |
mature T cell | 8.84e-07 | 18 |
immature alpha-beta T cell | 8.84e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 3.50e-14 | 1 |
respiratory system muscle | 3.50e-14 | 1 |
skeletal muscle of trunk | 3.50e-14 | 1 |
respiratory system skeletal muscle | 3.50e-14 | 1 |
thoracic segment muscle | 3.50e-14 | 1 |
chest organ | 3.50e-14 | 1 |
muscle of trunk | 3.50e-14 | 1 |
diaphragm | 3.50e-14 | 1 |
future diaphragm | 3.50e-14 | 1 |
cranial nerve II | 6.65e-14 | 1 |
cranial nerve | 6.65e-14 | 1 |
nerve trunk | 6.65e-14 | 1 |
nerve connecting eye with brain | 6.65e-14 | 1 |
nerve | 6.65e-14 | 1 |
retinal neural layer | 6.65e-14 | 1 |
presumptive neural retina | 6.65e-14 | 1 |
cerebellum | 1.83e-09 | 6 |
rhombic lip | 1.83e-09 | 6 |
segmental subdivision of nervous system | 2.23e-09 | 13 |
muscle structure | 9.87e-08 | 2 |
muscle organ | 9.87e-08 | 2 |
neural tissue | 1.36e-07 | 2 |
multi cell component structure | 1.36e-07 | 2 |
neuron projection bundle | 1.36e-07 | 2 |