FFCP PHASE1:Hg19::chr16:28319806..28319807,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:28319806..28319807,+ | |||
|description=CAGE_peak_at_chr16:28319806..28319807,+ | |||
|id=chr16:28319806..28319807,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.37e-07!6;CL:0000031!5.37e-07!6;CL:0000404!5.37e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000625;9.27e-11;11!CL:0000123;1.59e-07;2!CL:0000242;1.59e-07;2!CL:0000791;8.92e-07;18!CL:0000789;8.92e-07;18!CL:0002419;8.92e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,9.13e-11,11;CL:0000242,1.45e-07,2;CL:0000791,8.84e-07,18;CL:0000789,8.84e-07,18;CL:0002420,8.84e-07,18;CL:0002419,8.84e-07,18;CL:0000790,8.84e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.37e-18;3!UBERON:0005425;9.12e-14;1!CL:0000790;8.92e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.68e-17!94;UBERON:0001016!5.68e-17!94;UBERON:0001017!1.46e-16!82;UBERON:0005743!3.15e-16!86;UBERON:0001869!6.45e-14!32;UBERON:0002346!6.49e-14!90;UBERON:0000955!7.43e-14!69;UBERON:0006238!7.43e-14!69;UBERON:0000956!9.65e-14!25;UBERON:0000203!9.65e-14!25;UBERON:0001049!1.00e-13!57;UBERON:0005068!1.00e-13!57;UBERON:0006241!1.00e-13!57;UBERON:0007135!1.00e-13!57;UBERON:0002616!5.38e-13!59;UBERON:0003075!7.81e-13!86;UBERON:0007284!7.81e-13!86;UBERON:0001893!8.67e-13!34;UBERON:0002020!1.16e-12!34;UBERON:0003528!1.16e-12!34;UBERON:0000924!1.44e-12!173;UBERON:0006601!1.44e-12!173;UBERON:0002780!2.50e-12!41;UBERON:0001890!2.50e-12!41;UBERON:0006240!2.50e-12!41;UBERON:0002619!3.08e-12!22;UBERON:0003080!6.77e-12!42;UBERON:0001950!7.53e-12!20;UBERON:0002791!7.56e-12!33;UBERON:0004121!1.21e-11!169;UBERON:0000153!2.77e-11!129;UBERON:0007811!2.77e-11!129;UBERON:0007023!3.11e-11!115;UBERON:0003056!1.32e-09!61;UBERON:0000033!9.58e-09!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;3.28e-14;1!UBERON:0003831;3.28e-14;1!UBERON:0003898;3.28e-14;1!UBERON:0004830;3.28e-14;1!UBERON:0003830;3.28e-14;1!UBERON:0005175;3.28e-14;1!UBERON:0001774;3.28e-14;1!UBERON:0001103;3.28e-14;1!UBERON:0000941;9.12e-14;1!UBERON:0001785;9.12e-14;1!UBERON:0002464;9.12e-14;1!UBERON:0004904;9.12e-14;1!UBERON:0001021;9.12e-14;1!UBERON:0002037;2.25e-09;6!UBERON:0004732;2.75e-09;13!UBERON:0005090;9.54e-08;2!UBERON:0001630;9.54e-08;2!UBERON:0003714;1.59e-07;2!UBERON:0005162;1.59e-07;2!UBERON:0000122;1.59e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,3.50e-14,1;UBERON:0003831,3.50e-14,1;UBERON:0003898,3.50e-14,1;UBERON:0004830,3.50e-14,1;UBERON:0003830,3.50e-14,1;UBERON:0005175,3.50e-14,1;UBERON:0001774,3.50e-14,1;UBERON:0001103,3.50e-14,1;UBERON:0010084,3.50e-14,1;UBERON:0000941,6.65e-14,1;UBERON:0001785,6.65e-14,1;UBERON:0002464,6.65e-14,1;UBERON:0004904,6.65e-14,1;UBERON:0001021,6.65e-14,1;UBERON:0003902,6.65e-14,1;UBERON:0005425,6.65e-14,1;UBERON:0002037,1.83e-09,6;UBERON:0006215,1.83e-09,6;UBERON:0004732,2.23e-09,13;UBERON:0005090,9.87e-08,2;UBERON:0001630,9.87e-08,2;UBERON:0003714,1.36e-07,2;UBERON:0005162,1.36e-07,2;UBERON:0000122,1.36e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0.393010762749165,0.616804496998528,0,0,0,0,0,0,0,0,0,0.390178042679635,0.164437904603676,0,0,0.14828656316206,0,0,0.113309342697566,0.383220493601921,0,0,0,1.30216690771284,0,0,0,0,0.236777252044017,1.64225599384209,0.604820229674197,0.267440195783507,1.01377082717959,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.431255149719035,0.898401253958239,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,1.13929437434833,0,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.703347082052564,0,0,1.05562704063997,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0,1.52581736317083,2.76448149828062,0.886642856860642,0.219385397153973,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,2.40773294189637,0.234264445725339,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.408610218334727,0.803765742325096,0.412618309791701,0,0,0,0.182248669974074,0.335434687599266,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0.665574309221114,0.0620964029413835,0.415045904808692,0,0,0,0,1.40500471742064,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27894371303652,0.215649622793364,0,0,0,0.425149840203366,1.48722917110803,0,0,0,0,0,0,0.128458450192919,0,0.957803154342908,0.41023272848151,1.00828678488687,0.138314504928436,0.322951291263702,1.42769420259154,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0.620060389503552,0.126831620387814,1.09394961803644,0,0,0,0,0,0,0,0.91064876540519,0,0,0,0,0.197318320688547,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.0714765441766563,0.158013611732727,0.116241425368125,0.173858272302579,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.098150233615243,0,0.647428837187895,0.307988420568741,0,0.485710993059139,0.233939463462106,0.198950775161368,0.118920090777569,0.22589216407792,0.109940516745429,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,1.74540276136151,0,0,0,0,0,0,0,0.203977659483963,0.534434810531121,0,0,0,0.267964130156178,0,0,0.639701945702943,0.23806443146374,0.0645889098360061,0.248298857183432,0,0,0.202117188958219,0.435433495793923,0.684466602170562,0,0,0,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr16:28319806..28319807,+ | |||
}} |
Latest revision as of 07:38, 25 July 2015
Short description: | p@chr16:28319806..28319807, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:28319806..28319807, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 9.13e-11 | 11 |
Merkel cell | 1.45e-07 | 2 |
mature alpha-beta T cell | 8.84e-07 | 18 |
alpha-beta T cell | 8.84e-07 | 18 |
immature T cell | 8.84e-07 | 18 |
mature T cell | 8.84e-07 | 18 |
immature alpha-beta T cell | 8.84e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 3.50e-14 | 1 |
respiratory system muscle | 3.50e-14 | 1 |
skeletal muscle of trunk | 3.50e-14 | 1 |
respiratory system skeletal muscle | 3.50e-14 | 1 |
thoracic segment muscle | 3.50e-14 | 1 |
chest organ | 3.50e-14 | 1 |
muscle of trunk | 3.50e-14 | 1 |
diaphragm | 3.50e-14 | 1 |
future diaphragm | 3.50e-14 | 1 |
cranial nerve II | 6.65e-14 | 1 |
cranial nerve | 6.65e-14 | 1 |
nerve trunk | 6.65e-14 | 1 |
nerve connecting eye with brain | 6.65e-14 | 1 |
nerve | 6.65e-14 | 1 |
retinal neural layer | 6.65e-14 | 1 |
presumptive neural retina | 6.65e-14 | 1 |
cerebellum | 1.83e-09 | 6 |
rhombic lip | 1.83e-09 | 6 |
segmental subdivision of nervous system | 2.23e-09 | 13 |
muscle structure | 9.87e-08 | 2 |
muscle organ | 9.87e-08 | 2 |
neural tissue | 1.36e-07 | 2 |
multi cell component structure | 1.36e-07 | 2 |
neuron projection bundle | 1.36e-07 | 2 |