FFCP PHASE1:Hg19::chr16:53490788..53490807,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:53490788..53490807,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_at_chr16:53490788..53490807,+ | |description=CAGE_peak_at_chr16:53490788..53490807,+ | ||
|id=chr16:53490788..53490807,+ | |id=chr16:53490788..53490807,+ | ||
|ontology_enrichment_celltype=CL:0000791!4.02e-38!18;CL:0000789!4.02e-38!18;CL:0002420!4.02e-38!18;CL:0002419!4.02e-38!18;CL:0000790!4.02e-38!18;CL:0000084!8.30e-32!25;CL:0000827!8.30e-32!25;CL:0000625!3.08e-24!11;CL:0000838!6.51e-20!52;CL:0000542!2.14e-19!53;CL:0000051!2.14e-19!53;CL:0000738!5.31e-14!140;CL:0000624!1.70e-13!6;CL:0002087!1.78e-10!119;CL:0000037!1.80e-09!172;CL:0000566!1.80e-09!172;CL:0000988!2.06e-08!182;CL:0000898!8.23e-08!3;CL:0002032!1.51e-07!165;CL:0000837!1.51e-07!165;CL:0002031!2.01e-07!124;CL:0000842!3.77e-07!3;CL:0000623!4.56e-07!3;CL:0000825!4.56e-07!3;CL:0000767!8.17e-07!3 | |ontology_enrichment_celltype=CL:0000791!4.02e-38!18;CL:0000789!4.02e-38!18;CL:0002420!4.02e-38!18;CL:0002419!4.02e-38!18;CL:0000790!4.02e-38!18;CL:0000084!8.30e-32!25;CL:0000827!8.30e-32!25;CL:0000625!3.08e-24!11;CL:0000838!6.51e-20!52;CL:0000542!2.14e-19!53;CL:0000051!2.14e-19!53;CL:0000738!5.31e-14!140;CL:0000624!1.70e-13!6;CL:0002087!1.78e-10!119;CL:0000037!1.80e-09!172;CL:0000566!1.80e-09!172;CL:0000988!2.06e-08!182;CL:0000898!8.23e-08!3;CL:0002032!1.51e-07!165;CL:0000837!1.51e-07!165;CL:0002031!2.01e-07!124;CL:0000842!3.77e-07!3;CL:0000623!4.56e-07!3;CL:0000825!4.56e-07!3;CL:0000767!8.17e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.21e-59;18!CL:0000789;1.21e-59;18!CL:0002419;1.21e-59;18!CL:0000084;2.86e-46;25!CL:0000625;1.33e-37;11!CL:0000624;2.26e-20;6!CL:0000542;6.77e-14;53!CL:0000898;1.94e-11;3!CL:0000226;1.59e-10;3!CL:0000842;1.59e-10;3!CL:0000623;2.22e-10;3!CL:0000815;3.93e-08;2!CL:0000792;3.93e-08;2!CL:0002677;3.93e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.95e-60,18;CL:0000789,7.95e-60,18;CL:0002420,7.95e-60,18;CL:0002419,7.95e-60,18;CL:0000790,7.95e-60,18;CL:0000084,2.12e-46,25;CL:0000827,2.12e-46,25;CL:0000625,1.20e-37,11;CL:0000838,7.46e-27,52;CL:0000542,3.08e-26,53;CL:0000051,3.08e-26,53;CL:0000624,1.61e-20,6;CL:0002087,2.77e-12,115;CL:0000898,1.72e-11,3;CL:0000738,1.78e-11,136;CL:0000226,1.91e-10,3;CL:0000842,1.91e-10,3;CL:0000623,2.58e-10,3;CL:0000825,2.58e-10,3;CL:0002031,1.88e-08,120;CL:0000815,3.66e-08,2;CL:0000792,3.66e-08,2;CL:0002677,3.66e-08,2;CL:0000893,3.80e-08,2;CL:0002489,3.80e-08,2;CL:0000809,3.80e-08,2;CL:0000808,3.80e-08,2;CL:0000894,3.80e-08,2;CL:0000806,3.80e-08,2;CL:0000807,3.80e-08,2;CL:0000805,3.80e-08,2;CL:0002425,3.80e-08,2;CL:0000037,4.06e-08,168;CL:0000988,2.11e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.21e-59;18!CL:0000051;6.77e-14;53!CL:0002425;3.86e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.00e-15!15;UBERON:0000179!1.00e-15!15;UBERON:0000463!1.00e-15!15;UBERON:0004177!2.04e-10!7;UBERON:0002370!3.65e-09!4;UBERON:0005058!3.65e-09!4;UBERON:0009113!3.65e-09!4;UBERON:0003295!3.65e-09!4;UBERON:0005562!3.65e-09!4;UBERON:0001042!3.94e-07!10;UBERON:0009145!3.94e-07!10 | |ontology_enrichment_uberon=UBERON:0000178!1.00e-15!15;UBERON:0000179!1.00e-15!15;UBERON:0000463!1.00e-15!15;UBERON:0004177!2.04e-10!7;UBERON:0002370!3.65e-09!4;UBERON:0005058!3.65e-09!4;UBERON:0009113!3.65e-09!4;UBERON:0003295!3.65e-09!4;UBERON:0005562!3.65e-09!4;UBERON:0001042!3.94e-07!10;UBERON:0009145!3.94e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.37e-25;15!UBERON:0000179;5.37e-25;15!UBERON:0000463;5.37e-25;15!UBERON:0002390;9.86e-12;32!UBERON:0002193;5.18e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.62e-25,15;UBERON:0000179,6.62e-25,15;UBERON:0000463,6.62e-25,15;UBERON:0002370,2.58e-08,4;UBERON:0005058,2.58e-08,4;UBERON:0009113,2.58e-08,4;UBERON:0003295,2.58e-08,4;UBERON:0005562,2.58e-08,4 | |||
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| ||
|short_description=p@chr16:53490788..53490807,+ | |short_description=p@chr16:53490788..53490807,+ | ||
}} | }} |
Latest revision as of 09:46, 25 July 2015
Short description: | p@chr16:53490788..53490807, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:53490788..53490807, + |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 6.62e-25 | 15 |
haemolymphatic fluid | 6.62e-25 | 15 |
organism substance | 6.62e-25 | 15 |
thymus | 2.58e-08 | 4 |
hemolymphoid system gland | 2.58e-08 | 4 |
thymic region | 2.58e-08 | 4 |
pharyngeal gland | 2.58e-08 | 4 |
thymus primordium | 2.58e-08 | 4 |