FFCP PHASE1:Hg19::chr16:66423348..66423366,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:66423348..66423366,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_at_chr16:66423348..66423366,+ | |description=CAGE_peak_at_chr16:66423348..66423366,+ | ||
|id=chr16:66423348..66423366,+ | |id=chr16:66423348..66423366,+ | ||
|ontology_enrichment_celltype=CL:0002139!3.28e-30!24;CL:0000115!6.51e-29!35;CL:0000071!1.79e-22!18;CL:0002546!1.79e-22!18;CL:0002078!8.81e-21!44;CL:0000213!9.80e-14!57;CL:0000215!9.80e-14!57;CL:1000413!1.23e-13!9;CL:0002544!1.78e-09!6;CL:0005020!2.75e-09!6;CL:0002138!2.75e-09!6;CL:0005022!2.75e-09!6 | |ontology_enrichment_celltype=CL:0002139!3.28e-30!24;CL:0000115!6.51e-29!35;CL:0000071!1.79e-22!18;CL:0002546!1.79e-22!18;CL:0002078!8.81e-21!44;CL:0000213!9.80e-14!57;CL:0000215!9.80e-14!57;CL:1000413!1.23e-13!9;CL:0002544!1.78e-09!6;CL:0005020!2.75e-09!6;CL:0002138!2.75e-09!6;CL:0005022!2.75e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;7.19e-60;24!CL:0000115;1.74e-53;36!CL:0000071;3.18e-44;18!CL:0002078;1.13e-30;45!CL:1000413;7.57e-26;9!CL:0000213;5.00e-22;58!CL:0000215;5.00e-22;58!CL:0002544;1.88e-17;6!CL:0002138;4.87e-17;6!CL:0002543;3.70e-12;6!CL:0002188;3.43e-10;5!CL:0002144;7.28e-10;3!CL:0002618;3.20e-09;3!CL:0002262;2.44e-07;2!CL:1000398;2.44e-07;2!CL:1000746;3.02e-07;7!CL:1000612;3.02e-07;7!CL:0002545;3.98e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,8.28e-63,36;CL:0002139,5.54e-60,24;CL:0002078,1.71e-48,45;CL:0000071,2.76e-44,18;CL:0002546,2.76e-44,18;CL:0000213,1.10e-35,58;CL:0000215,1.10e-35,58;CL:1000413,7.55e-26,9;CL:0002544,1.81e-17,6;CL:0005020,4.32e-17,6;CL:0002138,4.32e-17,6;CL:0005022,4.32e-17,6;CL:0000222,5.03e-15,121;CL:0002543,3.19e-12,6;CL:0002188,3.64e-10,5;CL:0002144,7.52e-10,3;CL:0000076,2.41e-09,63;CL:0002618,2.64e-09,3;CL:0002262,2.45e-07,2;CL:1000398,2.45e-07,2;CL:1000746,3.15e-07,7;CL:1000612,3.15e-07,7;CL:0002545,3.71e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;3.18e-44;18!CL:0005022;4.87e-17;6!CL:0000222;3.98e-07;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.35e-34!115;UBERON:0000477!1.88e-26!286;UBERON:0004111!1.20e-24!241;UBERON:0000025!3.79e-23!194;UBERON:0001986!1.79e-22!18;UBERON:0004638!1.79e-22!18;UBERON:0004852!1.79e-22!18;UBERON:0000487!4.38e-19!22;UBERON:0000055!2.34e-18!69;UBERON:0004872!5.33e-17!84;UBERON:0001009!2.22e-16!113;UBERON:0002049!2.79e-16!79;UBERON:0007798!2.79e-16!79;UBERON:0006914!5.22e-16!25;UBERON:0004535!2.25e-14!110;UBERON:0001981!2.58e-14!60;UBERON:0007500!2.58e-14!60;UBERON:0004537!2.58e-14!60;UBERON:0006965!2.58e-14!60;UBERON:0003914!5.43e-14!118;UBERON:0000119!7.98e-14!312;UBERON:0000483!1.15e-13!309;UBERON:0003915!1.23e-13!9;UBERON:0004700!1.23e-13!9;UBERON:0001917!1.23e-13!9;UBERON:0001049!6.58e-11!57;UBERON:0005068!6.58e-11!57;UBERON:0006241!6.58e-11!57;UBERON:0007135!6.58e-11!57;UBERON:0000468!1.33e-10!659;UBERON:0000467!1.93e-10!625;UBERON:0000480!2.32e-10!626;UBERON:0003075!2.08e-09!86;UBERON:0007284!2.08e-09!86;UBERON:0002346!1.45e-08!90;UBERON:0002616!1.64e-08!59;UBERON:0003103!1.69e-08!69;UBERON:0002465!3.75e-08!10;UBERON:0002298!6.35e-08!8;UBERON:0000922!2.44e-07!612;UBERON:0000064!2.50e-07!219;UBERON:0007100!3.26e-07!27;UBERON:0000481!4.64e-07!347;UBERON:0002050!6.39e-07!605;UBERON:0005423!6.39e-07!605;UBERON:0003076!7.89e-07!15;UBERON:0003057!7.89e-07!15;UBERON:0004732!9.47e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.18e-44;18!UBERON:0001986;3.18e-44;18!UBERON:0004852;3.18e-44;18!UBERON:0000487;2.75e-35;22!UBERON:0006914;1.83e-30;25!UBERON:0003915;7.57e-26;9!UBERON:0004700;7.57e-26;9!UBERON:0001917;7.57e-26;9!UBERON:0000490;5.30e-20;33!UBERON:0000055;2.09e-17;65!UBERON:0007500;3.76e-13;56!UBERON:0001981;3.76e-13;56!UBERON:0004537;3.76e-13;56!UBERON:0001473;1.40e-12;8!UBERON:0004536;1.40e-12;8!UBERON:0006558;1.40e-12;8!UBERON:0002049;5.12e-11;75!UBERON:0007798;5.12e-11;75!UBERON:0001638;5.91e-11;9!UBERON:0003920;5.91e-11;9!UBERON:0004582;5.91e-11;9!UBERON:0002465;6.62e-10;10!UBERON:0010523;7.28e-10;3!UBERON:0001915;7.28e-10;3!UBERON:0001982;7.28e-10;3!UBERON:0003914;7.63e-10;74!UBERON:0001009;7.09e-09;112!UBERON:0004535;1.61e-08;109!UBERON:0000025;2.87e-08;93!UBERON:0001281;2.44e-07;2!UBERON:0003497;2.44e-07;2!UBERON:0003909;2.44e-07;2!UBERON:0003835;2.44e-07;2!UBERON:0000074;3.02e-07;7!UBERON:0001229;3.02e-07;7!UBERON:0005800;3.98e-07;2!UBERON:0001515;3.98e-07;2!UBERON:0000353;7.83e-07;15!UBERON:0001637;8.09e-07;42!UBERON:0003509;8.09e-07;42!UBERON:0004572;8.09e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.76e-44,18;UBERON:0001986,2.76e-44,18;UBERON:0004852,2.76e-44,18;UBERON:0000487,2.46e-35,22;UBERON:0000055,1.23e-32,68;UBERON:0006914,1.65e-30,25;UBERON:0002049,2.58e-27,78;UBERON:0007798,2.58e-27,78;UBERON:0003915,7.55e-26,9;UBERON:0004700,7.55e-26,9;UBERON:0001917,7.55e-26,9;UBERON:0001009,3.65e-25,112;UBERON:0007500,5.89e-24,59;UBERON:0001981,5.89e-24,59;UBERON:0004537,5.89e-24,59;UBERON:0006965,5.89e-24,59;UBERON:0004872,7.09e-23,83;UBERON:0004535,7.40e-23,109;UBERON:0003914,1.35e-20,117;UBERON:0004111,1.32e-17,240;UBERON:0000025,8.14e-15,192;UBERON:0001473,1.28e-12,8;UBERON:0004536,1.28e-12,8;UBERON:0006558,1.28e-12,8;UBERON:0001638,4.83e-11,9;UBERON:0003920,4.83e-11,9;UBERON:0004582,4.83e-11,9;UBERON:0002465,6.18e-10,10;UBERON:0010523,7.52e-10,3;UBERON:0001915,7.52e-10,3;UBERON:0001982,7.52e-10,3;UBERON:0003081,1.94e-09,203;UBERON:0000483,6.06e-09,306;UBERON:0000119,9.50e-09,309;UBERON:0001281,2.45e-07,2;UBERON:0003497,2.45e-07,2;UBERON:0003909,2.45e-07,2;UBERON:0003835,2.45e-07,2;UBERON:0010532,3.15e-07,7;UBERON:0000074,3.15e-07,7;UBERON:0001229,3.15e-07,7;UBERON:0001230,3.15e-07,7;UBERON:0003220,3.15e-07,7;UBERON:0005749,3.15e-07,7;UBERON:0004199,3.15e-07,7;UBERON:0004209,3.15e-07,7;UBERON:0004198,3.15e-07,7;UBERON:0001637,3.55e-07,42;UBERON:0003509,3.55e-07,42;UBERON:0004572,3.55e-07,42;UBERON:0005800,3.71e-07,2;UBERON:0001515,3.71e-07,2;UBERON:0000490,4.90e-07,148;UBERON:0000353,8.05e-07,15;UBERON:0000058,9.68e-07,19 | |||
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|short_description=p@chr16:66423348..66423366,+ | |short_description=p@chr16:66423348..66423366,+ | ||
}} | }} |
Latest revision as of 11:01, 25 July 2015
Short description: | p@chr16:66423348..66423366, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:66423348..66423366, + |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 8.28e-63 | 36 |
endothelial cell of vascular tree | 5.54e-60 | 24 |
meso-epithelial cell | 1.71e-48 | 45 |
blood vessel endothelial cell | 2.76e-44 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.76e-44 | 18 |
lining cell | 1.10e-35 | 58 |
barrier cell | 1.10e-35 | 58 |
endothelial cell of artery | 7.55e-26 | 9 |
aortic endothelial cell | 1.81e-17 | 6 |
lymphangioblast | 4.32e-17 | 6 |
endothelial cell of lymphatic vessel | 4.32e-17 | 6 |
vascular lymphangioblast | 4.32e-17 | 6 |
mesodermal cell | 5.03e-15 | 121 |
vein endothelial cell | 3.19e-12 | 6 |
glomerular endothelial cell | 3.64e-10 | 5 |
capillary endothelial cell | 7.52e-10 | 3 |
squamous epithelial cell | 2.41e-09 | 63 |
endothelial cell of umbilical vein | 2.64e-09 | 3 |
endothelial cell of sinusoid | 2.45e-07 | 2 |
endothelial cell of hepatic sinusoid | 2.45e-07 | 2 |
glomerular cell | 3.15e-07 | 7 |
kidney corpuscule cell | 3.15e-07 | 7 |
thoracic aorta endothelial cell | 3.71e-07 | 2 |