FFCP PHASE1:Hg19::chr16:771593..771612,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:771593..771612,+ | |||
|description=CAGE_peak_at_chr16:771593..771612,+ | |description=CAGE_peak_at_chr16:771593..771612,+ | ||
|id=chr16:771593..771612,+ | |id=chr16:771593..771612,+ | ||
|ontology_enrichment_celltype=CL:0000084!3.14e-09!25;CL:0000827!3.14e-09!25;CL:0000791!2.08e-07!18;CL:0000789!2.08e-07!18;CL:0002420!2.08e-07!18;CL:0002419!2.08e-07!18;CL:0000790!2.08e-07!18;CL:0000625!5.52e-07!11 | |ontology_enrichment_celltype=CL:0000084!3.14e-09!25;CL:0000827!3.14e-09!25;CL:0000791!2.08e-07!18;CL:0000789!2.08e-07!18;CL:0002420!2.08e-07!18;CL:0002419!2.08e-07!18;CL:0000790!2.08e-07!18;CL:0000625!5.52e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;4.57e-16;25!CL:0000791;3.08e-11;18!CL:0000789;3.08e-11;18!CL:0002419;3.08e-11;18!CL:0000815;5.23e-10;2!CL:0000792;5.23e-10;2!CL:0002677;5.23e-10;2!CL:0000625;6.41e-10;11!CL:0000898;6.16e-07;3 | |ontology_enrichment_celltype_v019=CL:0000084;4.57e-16;25!CL:0000791;3.08e-11;18!CL:0000789;3.08e-11;18!CL:0002419;3.08e-11;18!CL:0000815;5.23e-10;2!CL:0000792;5.23e-10;2!CL:0002677;5.23e-10;2!CL:0000625;6.41e-10;11!CL:0000898;6.16e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.61e-16,25;CL:0000827,4.61e-16,25;CL:0000791,3.15e-11,18;CL:0000789,3.15e-11,18;CL:0002420,3.15e-11,18;CL:0002419,3.15e-11,18;CL:0000790,3.15e-11,18;CL:0000815,5.03e-10,2;CL:0000792,5.03e-10,2;CL:0002677,5.03e-10,2;CL:0000625,6.70e-10,11;CL:0000838,3.19e-08,52;CL:0000542,5.00e-08,53;CL:0000051,5.00e-08,53;CL:0000898,6.01e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.08e-11;18 | |ontology_enrichment_development_v019=CL:0000790;3.08e-11;18 | ||
|ontology_enrichment_disease=DOID:162!8.74e-12!235;DOID:14566!2.35e-11!239;DOID:0050687!4.04e-10!143;DOID:305!4.08e-10!106 | |ontology_enrichment_disease=DOID:162!8.74e-12!235;DOID:14566!2.35e-11!239;DOID:0050687!4.04e-10!143;DOID:305!4.08e-10!106 | ||
|ontology_enrichment_disease_v019=DOID:1036;6.60e-14;8!DOID:5093;2.93e-11;4!DOID:1612;2.93e-11;4 | |ontology_enrichment_disease_v019=DOID:1036;6.60e-14;8!DOID:5093;2.93e-11;4!DOID:1612;2.93e-11;4 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,3.75e-14,8;DOID:5093,3.16e-11,4;DOID:1612,3.16e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0002619!1.46e-08!22;UBERON:0001950!1.63e-07!20;UBERON:0000073!5.79e-07!94;UBERON:0001016!5.79e-07!94;UBERON:0000956!6.15e-07!25;UBERON:0000203!6.15e-07!25;UBERON:0005743!6.87e-07!86;UBERON:0003056!9.61e-07!61 | |ontology_enrichment_uberon=UBERON:0002619!1.46e-08!22;UBERON:0001950!1.63e-07!20;UBERON:0000073!5.79e-07!94;UBERON:0001016!5.79e-07!94;UBERON:0000956!6.15e-07!25;UBERON:0000203!6.15e-07!25;UBERON:0005743!6.87e-07!86;UBERON:0003056!9.61e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.39e-09;2!UBERON:0005058;1.39e-09;2!UBERON:0009113;1.39e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0002370;1.39e-09;2!UBERON:0005058;1.39e-09;2!UBERON:0009113;1.39e-09;2 | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0.501559486172034,3.58514493296949,5.6813736688168,5.84480185223734,0,1.47302953737419,0.443067789167242,0,0.128091319725675,0.130059347559878,0,0,0,0,0,1.04535523804977,0,0.383220493601921,0.68725489096526,0,1.27426165729639,3.90650072313851,2.85135613334512,0.602300476311091,0.639933055772092,1.24930726552346,0,1.64225599384209,0.403213486449465,0,0.724122019413995,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0,0.458426764241994,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.49333509683432,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0.609868530647977,0.265059536642971,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.220587945464788,0.435758888184812,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0.882926198829301,0.491953754172454,0.686271241194102,0.219500570817251,0,0,0.185176890317059,0,0,0,0.695582429850461,0,0,0,0,2.37061319387782,0,0,0,0,0,0.16798212819886,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0,0,0.197030760201927,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.846016147141356,0.40101294060657,0.460404944679482,0.229628896329213,0,0.131124414959424,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0.270946437543853,0,0.764628819135115,1.66215201785745,0.223874754722178,0,0,0.769350375349168,0.328014645699706,0.325378394664303,0,0,0,0,0.650060246036521,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0,0.0890320356467374,0.330569830721956,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.320472213382419,0,0.735120647943095,0.557409525377156,0.28853842595289,0.0711418433484141,1.4348364545594,0.59873811429845,0,0,0,0,0,1.25343916618419,0,0,0,0,0,0,0,0,0.166849141711909,0.19538809540204,5.2897173040096,0,0.270455678475983,0,0,0.748562161632879,0,0.242721043499027,0,0,0,0,0,1.9882952955326,0.281338832821026,0,2.63686198762815,0,0,0,11.3369736534424,0,0.123084805461069,0,0,0,0,0,0,0,1.93866549219044,0.278304294485554,0,3.38556089410803,19.2411999991631,0.724999575434793,0.455173793141999,1.5255219017566,0.472775363535873,0.689486746482929,0,0.173624994933292,0,0,0,0.110579259931225,0,1.75508317723178,1.19832309870889,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,38.8334533143799,0,0.166211681900156,4.06072189110925,1.9606253431774,1.84603745673427,1.3282761290693,0,0,0,1.27217764290547,0.865554558968364,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0.242780379534093,0,0,0.30607276163049,0,0.751617097072463,0.207376382794494,0,0.330991955875499,0,0,0.284609546029793,0.138674673013139,0.173559738335131,0,0.174118413160805,0,0.343972064943233,0,0,0,0,0.529536760149002,0,0,0,0.633107959558787,0.195551382734803,0.0801588202515337,0.213452994739353,0,0.288180834308212,0,0.171594997861965,0,0.248505071130865,0,0,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,1.16495949527454,0.236349546921671,0.329663433524666,0.0674035438541849,0,0.0846733320657845,1.59045937961861,0.136203406111576,0,0.275078873194468,0,0,0,1.15424157650247,0,0.0788057072991982,0.0524545881349981,0,0.896436696664224,0,0,0,1.5256112259285,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0.60896299190448,0,0,0,0,0,0.314108192500469,0.886068179966986,0.366078794705889,0.500763722825999,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0.303298235083296,0,0.235265819698172,0,2.17381542916238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0.57785949122191,0,0.260994291965212,0,0,1.22368352253234,0.179088841081487,0,0.219284049578707,0,0,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.699397538597222,1.86623178009892,0.127894371303652,0.646948868380091,0,0.218419276384028,0.169732529954025,0,0.123935764259002,0,0,0,2.40171224485641,0,0,0.706521476061055,1.41696576325585,0,0.82046545696302,0,0.96820153449905,0.322951291263702,0,0,0.471878893390961,0,0,0,0,0.198916222116275,0,0,0,0.261906694481422,0,0,1.01306376927592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| ||
|short_description=p@chr16:771593..771612,+ | |short_description=p@chr16:771593..771612,+ | ||
}} | }} |
Latest revision as of 12:29, 25 July 2015
Short description: | p@chr16:771593..771612, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:771593..771612, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 4.61e-16 | 25 |
pro-T cell | 4.61e-16 | 25 |
mature alpha-beta T cell | 3.15e-11 | 18 |
alpha-beta T cell | 3.15e-11 | 18 |
immature T cell | 3.15e-11 | 18 |
mature T cell | 3.15e-11 | 18 |
immature alpha-beta T cell | 3.15e-11 | 18 |
regulatory T cell | 5.03e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.03e-10 | 2 |
naive regulatory T cell | 5.03e-10 | 2 |
CD8-positive, alpha-beta T cell | 6.70e-10 | 11 |
lymphoid lineage restricted progenitor cell | 3.19e-08 | 52 |
lymphocyte | 5.00e-08 | 53 |
common lymphoid progenitor | 5.00e-08 | 53 |
naive T cell | 6.01e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.75e-14 | 8 |
thoracic cancer | 3.16e-11 | 4 |
breast cancer | 3.16e-11 | 4 |