FFCP PHASE1:Hg19::chr17:48262471..48262492,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48262471..48262492,- | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48262471..48262492,- | |description=CAGE_peak_at_chr17:48262471..48262492,- | ||
|id=chr17:48262471..48262492,- | |id=chr17:48262471..48262492,- | ||
|ontology_enrichment_celltype=CL:0000055!2.73e-39!180;CL:0000057!9.51e-23!75;CL:0000183!1.58e-15!59;CL:0000680!4.09e-15!57;CL:0000056!4.09e-15!57;CL:0000355!4.09e-15!57;CL:0000187!2.24e-14!54;CL:0000048!2.38e-13!430;CL:0000723!1.18e-12!436;CL:0000393!1.99e-12!60;CL:0000211!1.99e-12!60;CL:0000034!2.94e-12!444;CL:0000192!6.11e-11!42;CL:0000514!6.11e-11!42;CL:0002334!2.51e-09!12;CL:0002371!2.03e-08!591;CL:0002620!8.53e-08!23;CL:0000499!1.72e-07!27;CL:0000144!1.83e-07!625;CL:0000359!7.62e-07!32 | |ontology_enrichment_celltype=CL:0000055!2.73e-39!180;CL:0000057!9.51e-23!75;CL:0000183!1.58e-15!59;CL:0000680!4.09e-15!57;CL:0000056!4.09e-15!57;CL:0000355!4.09e-15!57;CL:0000187!2.24e-14!54;CL:0000048!2.38e-13!430;CL:0000723!1.18e-12!436;CL:0000393!1.99e-12!60;CL:0000211!1.99e-12!60;CL:0000034!2.94e-12!444;CL:0000192!6.11e-11!42;CL:0000514!6.11e-11!42;CL:0002334!2.51e-09!12;CL:0002371!2.03e-08!591;CL:0002620!8.53e-08!23;CL:0000499!1.72e-07!27;CL:0000144!1.83e-07!625;CL:0000359!7.62e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0002334;8.32e-12;12!CL:0000134;1.50e-11;55!CL:0000723;5.20e-10;61!CL:0000048;1.08e-09;58!CL:0002320;2.90e-09;188!CL:0000057;5.46e-09;73!CL:0000499;7.90e-09;28!CL:0002570;4.19e-08;8!CL:0000187;8.43e-08;55!CL:0000034;8.78e-08;69!CL:0000327;1.20e-07;15!CL:0002620;8.67e-07;23!CL:0000192;8.81e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.14e-23,76;CL:0000048,2.38e-19,427;CL:0000723,1.85e-18,433;CL:0000034,2.56e-17,441;CL:0000187,1.83e-12,55;CL:0000680,4.44e-12,58;CL:0000056,4.44e-12,58;CL:0000355,4.44e-12,58;CL:0002334,6.65e-12,12;CL:0002320,3.26e-11,361;CL:0000134,2.27e-10,354;CL:0000393,3.30e-10,61;CL:0000211,3.30e-10,61;CL:0000192,1.76e-09,43;CL:0000514,1.76e-09,43;CL:0000499,7.25e-09,28;CL:0000219,2.42e-08,386;CL:0002570,3.73e-08,8;CL:0000327,1.26e-07,15;CL:0002620,8.66e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000355;9.47e-08;58!CL:0000514;8.81e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.13e-16!83;UBERON:0002329!4.13e-16!83;UBERON:0003077!4.13e-16!83;UBERON:0003059!4.13e-16!83;UBERON:0007282!4.13e-16!83;UBERON:0009618!4.13e-16!83;UBERON:0007285!4.13e-16!83;UBERON:0002385!2.28e-15!63;UBERON:0001015!2.28e-15!63;UBERON:0000383!2.28e-15!63;UBERON:0001134!3.03e-15!61;UBERON:0002036!3.03e-15!61;UBERON:0003082!3.03e-15!61;UBERON:0004290!6.14e-15!70;UBERON:0000486!6.20e-12!82;UBERON:0005256!2.13e-11!143;UBERON:0002100!6.81e-09!216;UBERON:0004872!1.57e-07!84;UBERON:0000475!4.03e-07!365;UBERON:0002199!7.89e-07!45;UBERON:0002416!7.89e-07!45;UBERON:0001013!9.02e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;8.24e-09;198!UBERON:0003688;4.34e-08;6!UBERON:0002358;4.34e-08;6!UBERON:0003684;4.34e-08;6!UBERON:0001178;4.34e-08;6!UBERON:0001013;5.52e-08;14!UBERON:0003104;9.98e-08;7!UBERON:0009142;9.98e-08;7!UBERON:0004457;1.21e-07;9!UBERON:0000042;1.21e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.13e-12,62;UBERON:0002036,1.13e-12,62;UBERON:0003082,1.13e-12,62;UBERON:0002385,6.44e-12,64;UBERON:0001015,6.44e-12,64;UBERON:0000383,6.44e-12,64;UBERON:0007524,2.25e-11,73;UBERON:0002384,2.25e-11,371;UBERON:0002329,4.59e-11,71;UBERON:0003059,4.59e-11,71;UBERON:0007282,4.59e-11,71;UBERON:0004290,4.59e-11,71;UBERON:0009618,4.59e-11,71;UBERON:0003077,9.48e-11,72;UBERON:0007285,9.48e-11,72;UBERON:0007503,2.81e-10,78;UBERON:0000486,4.79e-09,83;UBERON:0003688,4.37e-08,6;UBERON:0002358,4.37e-08,6;UBERON:0003684,4.37e-08,6;UBERON:0001178,4.37e-08,6;UBERON:0001013,5.07e-08,14;UBERON:0005256,1.77e-07,122;UBERON:0002199,4.31e-07,46;UBERON:0002416,4.31e-07,46;UBERON:0003104,9.76e-07,160;UBERON:0009142,9.76e-07,160 | |||
|phase1_expression=15.8060189965384,17.5562429590606,17.7602549160924,11.0080628188443,18.3254048715188,8.72338524100369,37.9949817252466,0,0.261185628199839,0.245733936501509,0,1.52908960491121,1.84636884759917,0.74259811776028,1.32558950291166,2.01697543935533,0.602694528023977,0,0,0.61560529038394,3.26401105990805,3.13454721478088,0,0.136874425072884,0.87879847716362,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,6.03630773733273,3.19656404608826,4.3372698286148,9.02408239144601,6.37324683427624,19.8821486762775,6.32625331393427,0.945348171640679,3.1042115644759,1.75669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3819061161174,5.57174251324151,2.25095607382472,26.1021324881421,8.51204117276057,5.60677600142307,10.6748995729705,30.0934409068935,0.933633106199299,1.0776853765575,0.653847612453835,3.02714855289863,5.76175924479999,0,0.312160076830321,0,0.747243402759005,0.117434498643765,0,0.140450806702248,0.204154171254893,0.491337269247072,0.619954687054593,16.6320400019487,18.0504858373347,1.82032272387605,4.31170885089743,0.336672227908132,0.500474079487857,0,4.82875382968922,7.35570709917647,4.8076178850111,3.85669422744072,8.25192324168765,8.75585294156127,8.68920794754204,5.40163972951924,3.50378599410692,7.21393512127762,6.88632368426882,7.76371128309825,3.02054715999716,5.55354303337052,9.29703976287223,3.71785930683267,13.845374108148,2.01504196455281,1.69560592310488,0,0.272746120590835,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0,1.56449532329816,3.85944562915731,0,1.85747171212792,1.44375896333917,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0.738155454624648,5.60967095213783,6.5851841813024,19.1111324801205,0,0,0,0,0,1.54411029268673,0.109750285408626,0,0,0,0,0,0,0,2.34817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,3.4214489204541,0.308482478109971,0,0,0.560655421726804,3.05172048183296,1.3200891447771,8.01484637698222,7.15312891703765,5.917119267892,6.11657668145202,5.2003718455683,1.02882949704857,1.41849132023278,1.3321108950805,8.57867961948885,41.2392420097497,4.11620168390384,4.23457039581856,10.6617584622764,1.58390374586686,1.50719688529793,0.871533458600294,1.29964888536674,0,0,0,11.0227433526128,27.5668646001873,0,2.31650090668127,0.821905290201534,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.12269149171914,2.00068208423871,0.271265023699736,13.9340477225641,17.664469890919,6.46579901639132,5.15422225967938,6.92176029373754,13.6444502433591,4.1389228517002,5.97803038681893,2.94990669666725,1.73767228936166,2.54541504701563,16.8140277667319,0,0,0,0.909382714338778,11.6504807657348,7.86214762657169,24.8107807818777,10.5888761568763,36.2051521818665,31.0096741198796,11.2575594794675,50.0255694756619,10.3892646511494,2.7757744884478,12.0741973212926,1.39616165223476,2.59627214591811,3.83494248917865,0,0.200506470303285,0,5.74072240823034,2.91345868810747,4.19598127870157,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,1.35473218771926,2.50844886927427,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.640986253728404,0.41254749960294,0,1.30012049207304,14.4615536859744,1.45006077438183,0.616194468458578,1.22802939780904,0.827019434907183,2.57808587683857,2.75531718437034,1.27839941124151,14.6902858817117,0,0,0,0,4.64845549297286,24.8701753996206,0,1.23213432070436,1.06461206063404,0.869932992075073,0.9266210955196,0.715624433709956,1.86079184679834,3.16379424718726,7.05331717518152,2.55897791311334,3.85145089230528,1.27281299170375,3.13979456079692,4.31693898199955,7.13796277313742,4.24124648444471,1.01091240786658,0,0,6.33923860816467,2.68084838594413,0,2.59349831675173,15.5545975149084,4.52032466480971,1.65409603063837,0.66343897524122,0.876901770507525,2.31510213706675,2.62357900818653,1.21746226177622,0.6196469961995,1.97186921772569,1.29070216983646,6.484436706866,3.5667105148125,0.354761064070598,3.37772216476263,1.97576935775941,0.379473173765715,1.04980416073495,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0.20453736500431,0,10.2643063928396,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38545801361771,0.113942055847001,0,0,0,0,3.57230614267263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0.123563938946503,0,0,10.4335094148843,0.234264445725339,0,0,0,0.394584402849391,7.25944296291983,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0.0882561266915003,6.77942222341597,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,2.14882720709979,0,0.279282401272254,0,0,0.3993580009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| ||
|short_description=p@chr17:48262471..48262492,- | |short_description=p@chr17:48262471..48262492,- | ||
}} | }} |
Latest revision as of 18:29, 25 July 2015
Short description: | p@chr17:48262471..48262492, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48262471..48262492, - |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.14e-23 | 76 |
multi fate stem cell | 2.38e-19 | 427 |
somatic stem cell | 1.85e-18 | 433 |
stem cell | 2.56e-17 | 441 |
muscle cell | 1.83e-12 | 55 |
muscle precursor cell | 4.44e-12 | 58 |
myoblast | 4.44e-12 | 58 |
multi-potent skeletal muscle stem cell | 4.44e-12 | 58 |
preadipocyte | 6.65e-12 | 12 |
connective tissue cell | 3.26e-11 | 361 |
mesenchymal cell | 2.27e-10 | 354 |
electrically responsive cell | 3.30e-10 | 61 |
electrically active cell | 3.30e-10 | 61 |
smooth muscle cell | 1.76e-09 | 43 |
smooth muscle myoblast | 1.76e-09 | 43 |
stromal cell | 7.25e-09 | 28 |
motile cell | 2.42e-08 | 386 |
mesenchymal stem cell of adipose | 3.73e-08 | 8 |
extracellular matrix secreting cell | 1.26e-07 | 15 |
skin fibroblast | 8.66e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.13e-12 | 62 |
striated muscle tissue | 1.13e-12 | 62 |
myotome | 1.13e-12 | 62 |
muscle tissue | 6.44e-12 | 64 |
musculature | 6.44e-12 | 64 |
musculature of body | 6.44e-12 | 64 |
dense mesenchyme tissue | 2.25e-11 | 73 |
connective tissue | 2.25e-11 | 371 |
somite | 4.59e-11 | 71 |
presomitic mesoderm | 4.59e-11 | 71 |
presumptive segmental plate | 4.59e-11 | 71 |
dermomyotome | 4.59e-11 | 71 |
trunk paraxial mesoderm | 4.59e-11 | 71 |
paraxial mesoderm | 9.48e-11 | 72 |
presumptive paraxial mesoderm | 9.48e-11 | 72 |
epithelial vesicle | 2.81e-10 | 78 |
multilaminar epithelium | 4.79e-09 | 83 |
omentum | 4.37e-08 | 6 |
peritoneum | 4.37e-08 | 6 |
abdominal cavity | 4.37e-08 | 6 |
visceral peritoneum | 4.37e-08 | 6 |
adipose tissue | 5.07e-08 | 14 |
trunk mesenchyme | 1.77e-07 | 122 |
integument | 4.31e-07 | 46 |
integumental system | 4.31e-07 | 46 |
mesenchyme | 9.76e-07 | 160 |
entire embryonic mesenchyme | 9.76e-07 | 160 |