FFCP PHASE1:Hg19::chr17:74136040..74136061,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=415bp_to_AB463648,AB464532_5end | |association_with_transcript=415bp_to_AB463648,AB464532_5end | ||
|cluster_id=chr17:74136040..74136061,- | |||
|coexpression_cluster_id=C2436 | |coexpression_cluster_id=C2436 | ||
|description=CAGE_peak_2_at_AB463648_5end,CAGE_peak_2_at_AB464532_5end | |description=CAGE_peak_2_at_AB463648_5end,CAGE_peak_2_at_AB464532_5end | ||
|id=chr17:74136040..74136061,- | |id=chr17:74136040..74136061,- | ||
|ontology_enrichment_celltype=CL:0002322!8.20e-15!5;CL:0000039!9.77e-07!7;CL:0000586!9.77e-07!7 | |ontology_enrichment_celltype=CL:0002322!8.20e-15!5;CL:0000039!9.77e-07!7;CL:0000586!9.77e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002322;4.58e-16;5!CL:0000313;1.65e-10;1!CL:0000167;3.71e-10;1!CL:0000164;3.71e-10;1!CL:0000502;3.71e-10;1!CL:0000172;3.71e-10;1!CL:0000173;3.71e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.69e-16,5;CL:0000313,1.65e-10,1;CL:0000167,3.71e-10,1;CL:0000164,3.71e-10,1;CL:0000502,3.71e-10,1;CL:0000172,3.71e-10,1;CL:0000173,3.71e-10,1;CL:0002351,3.71e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.95e-18;2!UBERON:0005754;2.59e-10;1!CL:0002351;3.71e-10;1 | |||
|ontology_enrichment_disease=DOID:305!3.21e-08!106;DOID:3119!4.69e-07!14 | |ontology_enrichment_disease=DOID:305!3.21e-08!106;DOID:3119!4.69e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2152;1.65e-10;1!DOID:4430;3.71e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.65e-10,1;DOID:4430,3.71e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0003135!8.43e-16!11;UBERON:0000473!2.28e-12!8;UBERON:0000058!2.25e-11!26;UBERON:0003133!4.10e-11!48;UBERON:0000464!3.56e-10!104;UBERON:0006947!3.83e-10!3;UBERON:0004054!3.83e-10!3;UBERON:0005156!1.61e-09!59;UBERON:0000990!1.61e-09!59;UBERON:0000466!4.53e-09!126;UBERON:0003101!6.01e-09!22;UBERON:0000079!6.01e-09!22;UBERON:0001896!2.25e-08!3;UBERON:0005290!2.25e-08!3;UBERON:0010096!2.25e-08!3;UBERON:0002298!8.74e-08!8;UBERON:0003886!1.05e-07!63;UBERON:0005904!1.11e-07!4;UBERON:0004175!1.38e-07!25;UBERON:0000991!2.08e-07!21;UBERON:0009196!2.08e-07!21;UBERON:0009117!2.08e-07!21;UBERON:0005564!2.08e-07!21;UBERON:0007023!2.96e-07!115;UBERON:0002113!3.26e-07!27;UBERON:0003918!3.26e-07!27;UBERON:0005095!3.26e-07!27;UBERON:0007687!3.26e-07!27;UBERON:0000489!4.43e-07!32;UBERON:0000080!4.46e-07!18;UBERON:0002120!4.46e-07!18;UBERON:0004875!4.46e-07!18;UBERON:0005721!4.46e-07!18;UBERON:0005754!4.46e-07!18;UBERON:0007297!4.46e-07!18;UBERON:0004176!5.22e-07!22 | |ontology_enrichment_uberon=UBERON:0003135!8.43e-16!11;UBERON:0000473!2.28e-12!8;UBERON:0000058!2.25e-11!26;UBERON:0003133!4.10e-11!48;UBERON:0000464!3.56e-10!104;UBERON:0006947!3.83e-10!3;UBERON:0004054!3.83e-10!3;UBERON:0005156!1.61e-09!59;UBERON:0000990!1.61e-09!59;UBERON:0000466!4.53e-09!126;UBERON:0003101!6.01e-09!22;UBERON:0000079!6.01e-09!22;UBERON:0001896!2.25e-08!3;UBERON:0005290!2.25e-08!3;UBERON:0010096!2.25e-08!3;UBERON:0002298!8.74e-08!8;UBERON:0003886!1.05e-07!63;UBERON:0005904!1.11e-07!4;UBERON:0004175!1.38e-07!25;UBERON:0000991!2.08e-07!21;UBERON:0009196!2.08e-07!21;UBERON:0009117!2.08e-07!21;UBERON:0005564!2.08e-07!21;UBERON:0007023!2.96e-07!115;UBERON:0002113!3.26e-07!27;UBERON:0003918!3.26e-07!27;UBERON:0005095!3.26e-07!27;UBERON:0007687!3.26e-07!27;UBERON:0000489!4.43e-07!32;UBERON:0000080!4.46e-07!18;UBERON:0002120!4.46e-07!18;UBERON:0004875!4.46e-07!18;UBERON:0005721!4.46e-07!18;UBERON:0005754!4.46e-07!18;UBERON:0007297!4.46e-07!18;UBERON:0004176!5.22e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;5.78e-27;3!UBERON:0004054;5.78e-27;3!UBERON:0005904;2.16e-20;4!UBERON:0003135;6.33e-13;11!UBERON:0004911;1.65e-10;1!UBERON:0001000;2.59e-10;1!UBERON:0000998;2.59e-10;1!UBERON:0006868;2.59e-10;1!UBERON:0005352;2.59e-10;1!UBERON:0001301;7.22e-10;1!UBERON:0000058;1.75e-08;10!UBERON:0004175;6.00e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.25e-27,3;UBERON:0004054,4.25e-27,3;UBERON:0005904,1.72e-20,4;UBERON:0003135,5.42e-13,11;UBERON:0004911,1.65e-10,1;UBERON:0000998,2.37e-10,1;UBERON:0006868,2.37e-10,1;UBERON:0001000,2.84e-10,1;UBERON:0005352,2.84e-10,1;UBERON:0001301,5.30e-10,1;UBERON:0000080,2.56e-09,9;UBERON:0002120,2.56e-09,9;UBERON:0004875,2.56e-09,9;UBERON:0005721,2.56e-09,9;UBERON:0005754,2.56e-09,9;UBERON:0007297,2.56e-09,9;UBERON:0002113,3.37e-08,26;UBERON:0003918,3.37e-08,26;UBERON:0011143,3.37e-08,26;UBERON:0005095,3.37e-08,26;UBERON:0007687,3.37e-08,26;UBERON:0004876,1.04e-07,11;UBERON:0000058,1.35e-07,19;UBERON:0003887,4.18e-07,12;UBERON:0000489,7.58e-07,31 | |||
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| ||
|short_description=p2@AB463648,p2@AB464532 | |short_description=p2@AB463648,p2@AB464532 | ||
}} | }} |
Latest revision as of 21:20, 25 July 2015
Short description: | p2@AB463648, p2@AB464532 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AB463648_5end, CAGE_peak_2_at_AB464532_5end |
Coexpression cluster: | C2436_serous_gastric_argyrophil_gall_smallcell_gastrointestinal_acantholytic |
Association with transcript: | 415bp_to_AB463648, AB464532_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.69e-16 | 5 |
serous secreting cell | 1.65e-10 | 1 |
peptide hormone secreting cell | 3.71e-10 | 1 |
enteroendocrine cell | 3.71e-10 | 1 |
type D enteroendocrine cell | 3.71e-10 | 1 |
somatostatin secreting cell | 3.71e-10 | 1 |
pancreatic D cell | 3.71e-10 | 1 |
progenitor cell of endocrine pancreas | 3.71e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 4.25e-27 | 3 |
internal male genitalia | 4.25e-27 | 3 |
duct of male reproductive system | 1.72e-20 | 4 |
male reproductive organ | 5.42e-13 | 11 |
epithelium of female gonad | 1.65e-10 | 1 |
seminal vesicle | 2.37e-10 | 1 |
seminal fluid secreting gland | 2.37e-10 | 1 |
vas deferens | 2.84e-10 | 1 |
spermatic cord | 2.84e-10 | 1 |
epididymis | 5.30e-10 | 1 |
mesonephros | 2.56e-09 | 9 |
pronephros | 2.56e-09 | 9 |
nephrogenic cord | 2.56e-09 | 9 |
pronephric mesoderm | 2.56e-09 | 9 |
rostral part of nephrogenic cord | 2.56e-09 | 9 |
presumptive pronephric mesoderm | 2.56e-09 | 9 |
kidney | 3.37e-08 | 26 |
kidney mesenchyme | 3.37e-08 | 26 |
upper urinary tract | 3.37e-08 | 26 |
kidney rudiment | 3.37e-08 | 26 |
kidney field | 3.37e-08 | 26 |
urogenital ridge | 1.04e-07 | 11 |
duct | 1.35e-07 | 19 |
intraembryonic coelom | 4.18e-07 | 12 |
cavitated compound organ | 7.58e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.65e-10 | 1 |
somatostatinoma | 3.71e-10 | 1 |