FFCP PHASE1:Hg19::chr17:79477834..79477869,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:79477834..79477869,- | |||
|coexpression_cluster_id=C845 | |||
|description=CAGE_peak_at_chr17:79477834..79477869,- | |||
|id=chr17:79477834..79477869,- | |||
|ontology_enrichment_celltype=CL:0000144!8.96e-20!625;CL:0002371!1.07e-19!591;CL:0000055!8.15e-19!180;CL:0000548!2.67e-16!679;CL:0000004!2.67e-16!679;CL:0000255!2.67e-16!679;CL:0000012!1.05e-15!682;CL:0002321!1.24e-12!248;CL:0000220!3.07e-12!246;CL:0000222!8.48e-11!119;CL:0000393!1.70e-10!60;CL:0000211!1.70e-10!60;CL:0000003!2.57e-10!722;CL:0000183!8.99e-10!59;CL:0000192!7.16e-09!42;CL:0000514!7.16e-09!42;CL:0000680!7.52e-09!57;CL:0000056!7.52e-09!57;CL:0000355!7.52e-09!57;CL:0000187!2.74e-08!54;CL:0000034!7.29e-08!444;CL:0000359!9.78e-08!32;CL:0002077!2.25e-07!33;CL:0000723!2.33e-07!436;CL:0000057!2.59e-07!75;CL:0000048!5.64e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0002077;2.61e-07;34!CL:0000359;3.57e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.65e-13,250;CL:0000222,6.67e-11,121;CL:0000393,1.72e-10,61;CL:0000211,1.72e-10,61;CL:0000680,7.57e-09,58;CL:0000056,7.57e-09,58;CL:0000355,7.57e-09,58;CL:0000192,1.26e-08,43;CL:0000514,1.26e-08,43;CL:0000034,2.57e-08,441;CL:0000187,2.78e-08,55;CL:0002077,5.23e-08,34;CL:0000359,8.72e-08,32;CL:0000723,9.44e-08,433;CL:0000048,2.35e-07,427;CL:0000057,4.13e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.79e-11!79;UBERON:0007798!5.79e-11!79;UBERON:0000914!2.43e-10!83;UBERON:0002329!2.43e-10!83;UBERON:0003077!2.43e-10!83;UBERON:0003059!2.43e-10!83;UBERON:0007282!2.43e-10!83;UBERON:0009618!2.43e-10!83;UBERON:0007285!2.43e-10!83;UBERON:0000486!3.52e-10!82;UBERON:0001637!4.44e-10!42;UBERON:0003509!4.44e-10!42;UBERON:0004572!4.44e-10!42;UBERON:0004290!1.40e-09!70;UBERON:0001981!2.68e-09!60;UBERON:0007500!2.68e-09!60;UBERON:0004537!2.68e-09!60;UBERON:0006965!2.68e-09!60;UBERON:0000055!7.85e-09!69;UBERON:0004872!2.29e-08!84;UBERON:0001134!4.51e-08!61;UBERON:0002036!4.51e-08!61;UBERON:0003082!4.51e-08!61;UBERON:0005256!6.39e-08!143;UBERON:0002385!9.04e-08!63;UBERON:0001015!9.04e-08!63;UBERON:0000383!9.04e-08!63;UBERON:0003914!1.28e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.59e-07;42!UBERON:0003509;2.59e-07;42!UBERON:0004572;2.59e-07;42!UBERON:0007500;7.33e-07;56!UBERON:0001981;7.33e-07;56!UBERON:0004537;7.33e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.88e-11,78;UBERON:0002049,3.20e-11,78;UBERON:0007798,3.20e-11,78;UBERON:0000486,3.53e-10,83;UBERON:0001637,3.79e-10,42;UBERON:0003509,3.79e-10,42;UBERON:0004572,3.79e-10,42;UBERON:0002329,1.46e-09,71;UBERON:0003059,1.46e-09,71;UBERON:0007282,1.46e-09,71;UBERON:0004290,1.46e-09,71;UBERON:0009618,1.46e-09,71;UBERON:0007500,1.47e-09,59;UBERON:0001981,1.47e-09,59;UBERON:0004537,1.47e-09,59;UBERON:0006965,1.47e-09,59;UBERON:0007524,2.06e-09,73;UBERON:0000055,4.18e-09,68;UBERON:0003077,5.08e-09,72;UBERON:0007285,5.08e-09,72;UBERON:0000926,9.21e-09,315;UBERON:0004120,9.21e-09,315;UBERON:0006603,9.21e-09,315;UBERON:0004872,1.35e-08,83;UBERON:0001134,4.78e-08,62;UBERON:0002036,4.78e-08,62;UBERON:0003082,4.78e-08,62;UBERON:0003914,7.39e-08,117;UBERON:0002385,1.20e-07,64;UBERON:0001015,1.20e-07,64;UBERON:0000383,1.20e-07,64;UBERON:0000490,3.83e-07,148;UBERON:0004535,9.24e-07,109 | |||
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| |||
|short_description=p@chr17:79477834..79477869,- | |||
}} |
Latest revision as of 22:43, 25 July 2015
Short description: | p@chr17:79477834..79477869, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79477834..79477869, - |
Coexpression cluster: | C845_Alveolar_Hair_Olfactory_Osteoblast_Endothelial_Fibroblast_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.65e-13 | 250 |
mesodermal cell | 6.67e-11 | 121 |
electrically responsive cell | 1.72e-10 | 61 |
electrically active cell | 1.72e-10 | 61 |
muscle precursor cell | 7.57e-09 | 58 |
myoblast | 7.57e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.57e-09 | 58 |
smooth muscle cell | 1.26e-08 | 43 |
smooth muscle myoblast | 1.26e-08 | 43 |
stem cell | 2.57e-08 | 441 |
muscle cell | 2.78e-08 | 55 |
ecto-epithelial cell | 5.23e-08 | 34 |
vascular associated smooth muscle cell | 8.72e-08 | 32 |
somatic stem cell | 9.44e-08 | 433 |
multi fate stem cell | 2.35e-07 | 427 |
fibroblast | 4.13e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.88e-11 | 78 |
vasculature | 3.20e-11 | 78 |
vascular system | 3.20e-11 | 78 |
multilaminar epithelium | 3.53e-10 | 83 |
artery | 3.79e-10 | 42 |
arterial blood vessel | 3.79e-10 | 42 |
arterial system | 3.79e-10 | 42 |
somite | 1.46e-09 | 71 |
presomitic mesoderm | 1.46e-09 | 71 |
presumptive segmental plate | 1.46e-09 | 71 |
dermomyotome | 1.46e-09 | 71 |
trunk paraxial mesoderm | 1.46e-09 | 71 |
epithelial tube open at both ends | 1.47e-09 | 59 |
blood vessel | 1.47e-09 | 59 |
blood vasculature | 1.47e-09 | 59 |
vascular cord | 1.47e-09 | 59 |
dense mesenchyme tissue | 2.06e-09 | 73 |
vessel | 4.18e-09 | 68 |
paraxial mesoderm | 5.08e-09 | 72 |
presumptive paraxial mesoderm | 5.08e-09 | 72 |
mesoderm | 9.21e-09 | 315 |
mesoderm-derived structure | 9.21e-09 | 315 |
presumptive mesoderm | 9.21e-09 | 315 |
splanchnic layer of lateral plate mesoderm | 1.35e-08 | 83 |
skeletal muscle tissue | 4.78e-08 | 62 |
striated muscle tissue | 4.78e-08 | 62 |
myotome | 4.78e-08 | 62 |
epithelial tube | 7.39e-08 | 117 |
muscle tissue | 1.20e-07 | 64 |
musculature | 1.20e-07 | 64 |
musculature of body | 1.20e-07 | 64 |
unilaminar epithelium | 3.83e-07 | 148 |
cardiovascular system | 9.24e-07 | 109 |