FFCP PHASE1:Hg19::chr17:8029934..8029968,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:8029934..8029968,-
|short_description=p@chr17:8029934..8029968,-
|description=CAGE_peak_at_chr17:8029934..8029968,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:8029934..8029968,- | |||
|description=CAGE_peak_at_chr17:8029934..8029968,- | |||
|id=chr17:8029934..8029968,- | |||
|ontology_enrichment_celltype=CL:0000542!8.73e-12!53;CL:0000051!8.73e-12!53;CL:0000838!2.48e-11!52;CL:0000084!2.61e-08!25;CL:0000827!2.61e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.65e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.61e-07,24;CL:0000826,4.61e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.08e-10!235;DOID:14566!1.60e-09!239;DOID:0050687!2.29e-07!143;DOID:0050686!4.99e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.27e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.24e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.21e-13!57;UBERON:0005068!1.21e-13!57;UBERON:0006241!1.21e-13!57;UBERON:0007135!1.21e-13!57;UBERON:0007023!1.23e-13!115;UBERON:0000955!1.03e-12!69;UBERON:0006238!1.03e-12!69;UBERON:0000073!1.09e-12!94;UBERON:0001016!1.09e-12!94;UBERON:0002020!3.17e-12!34;UBERON:0003528!3.17e-12!34;UBERON:0001017!3.52e-12!82;UBERON:0005743!4.45e-12!86;UBERON:0002616!6.63e-12!59;UBERON:0001893!6.96e-12!34;UBERON:0003080!7.30e-12!42;UBERON:0002791!1.76e-11!33;UBERON:0001869!1.85e-11!32;UBERON:0002780!2.13e-11!41;UBERON:0001890!2.13e-11!41;UBERON:0006240!2.13e-11!41;UBERON:0002346!5.83e-11!90;UBERON:0001950!1.78e-10!20;UBERON:0003075!2.91e-10!86;UBERON:0007284!2.91e-10!86;UBERON:0000956!3.06e-10!25;UBERON:0000203!3.06e-10!25;UBERON:0002619!3.23e-10!22;UBERON:0000153!1.66e-08!129;UBERON:0007811!1.66e-08!129;UBERON:0003056!2.40e-08!61;UBERON:0000033!1.78e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.75e-13;22!UBERON:0001869;3.61e-13;32!UBERON:0001950;7.86e-13;20!UBERON:0000956;8.71e-13;25!UBERON:0000203;8.71e-13;25!UBERON:0001893;6.99e-12;34!UBERON:0003528;8.91e-12;34!UBERON:0002020;8.91e-12;34!UBERON:0002791;2.17e-11;32!UBERON:0002780;2.02e-10;41!UBERON:0001890;2.02e-10;41!UBERON:0000073;4.79e-10;53!UBERON:0002616;4.79e-10;53!UBERON:0000200;2.22e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.45e-15,56;UBERON:0005068,2.45e-15,56;UBERON:0006241,2.45e-15,56;UBERON:0007135,2.45e-15,56;UBERON:0000073,3.51e-15,53;UBERON:0002616,3.51e-15,53;UBERON:0001869,2.70e-14,32;UBERON:0002780,1.90e-13,41;UBERON:0001890,1.90e-13,41;UBERON:0003080,1.90e-13,41;UBERON:0006240,1.90e-13,41;UBERON:0003528,2.31e-13,34;UBERON:0002020,2.31e-13,34;UBERON:0002619,3.68e-13,22;UBERON:0001893,3.84e-13,34;UBERON:0000955,5.08e-13,68;UBERON:0006238,5.08e-13,68;UBERON:0002791,6.16e-13,32;UBERON:0001950,1.07e-12,20;UBERON:0000956,1.08e-12,25;UBERON:0000203,1.08e-12,25;UBERON:0001017,1.58e-12,81;UBERON:0002346,6.31e-12,86;UBERON:0001016,2.87e-11,89;UBERON:0003075,2.16e-10,82;UBERON:0007284,2.16e-10,82;UBERON:0000200,4.89e-09,6;UBERON:0003056,8.36e-09,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43117993565528,0.136874425072884,0.125542639594803,1.91033514369878,2.05251473624864,2.67616656466509,0,0,0.309632246632152,0,0,0.369754010166788,5.19030243888021,4.54941543959749,1.46800219667424,1.10799081706375,0.401088894940283,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0.400395987036012,1.14950487990897,0.661044872784862,0,0,0,0,1.32171328579026,0,0.263384084775077,0.983548850569165,1.17903228824749,0.822405995998037,0.83593247695339,0.32592226663359,0,0,0.779873198196215,0.294605907474837,0.221533894583621,0.541607727530031,0.128091319725675,0.260118695119756,0.328875809207352,0,0.579606171470105,0.593146252648242,0.802622484269139,1.04535523804977,1.0197840842781,0.383220493601921,0,0.253019692019503,0.95569624297229,1.30216690771284,0.950452044448374,0.903450714466637,0.511946444617674,0,0.473554504088034,0.821127996921047,0.80642697289893,0.534880391567015,0.289648807765598,0,0,0.255725123687061,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.654895377488563,0.728590576585084,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0.17859945656816,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0.326923806226917,0.151357427644931,0,0,0,0,0,0,0,0,0,0.245668634623536,0.309977343527296,0,0,0,0.718618141816238,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0.323292113637624,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.348581828608555,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0,0.330881918197182,0.217879444092406,0.474541238222193,0.269662616320329,0.588664395376038,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0.441463099414651,0,0,0,0,0.201057944823262,0.277765335475589,0.651616610620649,0,0,0.34779121492523,0,0,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.581267877027924,0.383382679165211,0,0,0,0.288239906833923,0.12624243342638,0.317489471460845,0.763976851116555,0,0,0.205654985406647,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03506518376698,0.788123040807709,0.646882724578552,0.641715181398742,0.254094624222463,3.90419561572865,0,1.67516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,0,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.460404944679482,0,0,0,0,0.308061348417659,0,0,0.422206515571503,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0.984043937099117,0,0.824328093181778,0.366277859273374,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.893288987462089,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.430234056612155,0,0,0,0,0,0.379473173765715,0,0.288666338176536,0,0,0.941438007767792,0,0,0.886860307073351,0.229723400206959,0.507447609232169,0.764637207142375,1.13929437434833,0,0.411362273086194,0.648473311192717,0,0,0.320472213382419,5.77487913158015,1.71528151186722,1.48642540100575,3.75099953738757,4.26851060090485,0.956557636372934,0.399158742865633,0,0.846694330895531,0,0.280797178113459,0.684704037099577,0,0,0.169291777801603,0,0,0,1.71752672377882,0,0,0,0,0,1.23087398947712,0.270455678475983,0,1.4098700508785,0,0.293016358543788,10.0729233052096,13.9304230346848,0.568272293612826,0,0,0.307160702099232,0.994147647766298,1.68803299692615,0.556543525114529,1.81284261649436,0,0.597743964753209,0.276283915531148,0.503865495708552,1.84083628503879,2.09244169283818,0,0.269605053441981,0.537063524026827,0,0.887790650732402,2.3948309234694,1.11136990144637,0,0.834912883456661,3.99227596002388,0.260427761085233,0.0874599999961957,1.44999915086959,0,0.254253650292766,0.709163045303809,4.48166385213904,1.45802306691627,1.56262495439963,1.77148277162768,1.32656082487949,10.6807215421958,27.7553942427374,1.18219047581419,0,1.96089234334182,0.41827123283581,1.84680620409113,0.113942055847001,1.38338342632836,0.538545866458633,0.434589487688032,0,0.274792780205587,0,1.02193298195737,0.156980256395025,0,0.902382642468723,0.392125068635479,0.671286347903371,0.189753732724185,0.317873157960757,0.632994193584081,0,0,6.49165919226273,0,0.265372693510018,0.611030144933625,6.22694370229306,3.33622635155558,4.69898772774549,0.337005664903385,0,0,1.094728735294,1.17398771359254,0.485560759068186,0,0,13.7732742733721,0.442306057399416,2.25485129121739,0.414752765588989,0.664653872707185,1.65495977937749,2.82539626566503,1.19472429772959,0,8.04313103476204,0,0.783939179315021,1.48000651186684,0.34945333648406,0,2.12863928835987,1.16942907337897,2.7098100827559,0.290967049465258,2.55942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| ||
|short_description=p@chr17:8029934..8029968,- | |||
}} | }} |
Latest revision as of 23:06, 25 July 2015
Short description: | p@chr17:8029934..8029968, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:8029934..8029968, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.61e-07 | 24 |
pro-B cell | 4.61e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
neural tube | 2.45e-15 | 56 |
neural rod | 2.45e-15 | 56 |
future spinal cord | 2.45e-15 | 56 |
neural keel | 2.45e-15 | 56 |
regional part of nervous system | 3.51e-15 | 53 |
regional part of brain | 3.51e-15 | 53 |
cerebral hemisphere | 2.70e-14 | 32 |
regional part of forebrain | 1.90e-13 | 41 |
forebrain | 1.90e-13 | 41 |
anterior neural tube | 1.90e-13 | 41 |
future forebrain | 1.90e-13 | 41 |
brain grey matter | 2.31e-13 | 34 |
gray matter | 2.31e-13 | 34 |
regional part of cerebral cortex | 3.68e-13 | 22 |
telencephalon | 3.84e-13 | 34 |
brain | 5.08e-13 | 68 |
future brain | 5.08e-13 | 68 |
regional part of telencephalon | 6.16e-13 | 32 |
neocortex | 1.07e-12 | 20 |
cerebral cortex | 1.08e-12 | 25 |
pallium | 1.08e-12 | 25 |
central nervous system | 1.58e-12 | 81 |
neurectoderm | 6.31e-12 | 86 |
nervous system | 2.87e-11 | 89 |
neural plate | 2.16e-10 | 82 |
presumptive neural plate | 2.16e-10 | 82 |
gyrus | 4.89e-09 | 6 |
pre-chordal neural plate | 8.36e-09 | 61 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.24e-07 | 10 |