FFCP PHASE1:Hg19::chr18:39874020..39874024,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:39874020..39874024,+ | |||
|coexpression_cluster_id=C87 | |||
|description=CAGE_peak_at_chr18:39874020..39874024,+ | |description=CAGE_peak_at_chr18:39874020..39874024,+ | ||
|id=chr18:39874020..39874024,+ | |id=chr18:39874020..39874024,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;1.33e-15;2!CL:0000243;1.06e-07;15!CL:0000125;1.06e-07;15!CL:0000095;5.50e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.33e-15,2;CL:0000243,1.06e-07,15;CL:0000125,1.06e-07,15;CL:0000030,1.06e-07,15;CL:0000339,1.06e-07,15;CL:0000095,5.50e-07,17;CL:0000123,5.50e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.35e-38;3!UBERON:0005425;2.73e-29;1!UBERON:0006238;2.18e-11;10!CL:0000339;1.06e-07;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;1.60e-10;11!DOID:4362;5.08e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.60e-10,11;DOID:4362,5.08e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001017!5.60e-07!82;UBERON:0000073!9.56e-07!94;UBERON:0001016!9.56e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.73e-29;1!UBERON:0007195;2.73e-29;1!UBERON:0001785;2.73e-29;1!UBERON:0002464;2.73e-29;1!UBERON:0004904;2.73e-29;1!UBERON:0001021;2.73e-29;1!UBERON:0006955;1.33e-15;2!UBERON:0004801;1.33e-15;2!UBERON:0003714;2.21e-15;2!UBERON:0005162;2.21e-15;2!UBERON:0000122;2.21e-15;2!UBERON:0000966;4.79e-07;5!UBERON:0005388;4.79e-07;5!UBERON:0001802;4.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.78e-29,1;UBERON:0001785,1.78e-29,1;UBERON:0002464,1.78e-29,1;UBERON:0004904,1.78e-29,1;UBERON:0001021,1.78e-29,1;UBERON:0003902,1.78e-29,1;UBERON:0005425,1.78e-29,1;UBERON:0007195,4.20e-29,1;UBERON:0000966,5.89e-20,6;UBERON:0005388,5.89e-20,6;UBERON:0001802,5.89e-20,6;UBERON:0006955,1.33e-15,2;UBERON:0004801,1.33e-15,2;UBERON:0003714,1.78e-15,2;UBERON:0005162,1.78e-15,2;UBERON:0000122,1.78e-15,2;UBERON:0001781,2.11e-08,4 | |||
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| ||
|short_description=p@chr18:39874020..39874024,+ | |short_description=p@chr18:39874020..39874024,+ | ||
}} | }} |
Latest revision as of 00:52, 26 July 2015
Short description: | p@chr18:39874020..39874024, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:39874020..39874024, + |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.33e-15 | 2 |
glial cell (sensu Vertebrata) | 1.06e-07 | 15 |
glial cell | 1.06e-07 | 15 |
glioblast | 1.06e-07 | 15 |
glioblast (sensu Vertebrata) | 1.06e-07 | 15 |
neuron associated cell | 5.50e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 5.50e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.78e-29 | 1 |
cranial nerve | 1.78e-29 | 1 |
nerve trunk | 1.78e-29 | 1 |
nerve connecting eye with brain | 1.78e-29 | 1 |
nerve | 1.78e-29 | 1 |
retinal neural layer | 1.78e-29 | 1 |
presumptive neural retina | 1.78e-29 | 1 |
stroma of bone marrow | 4.20e-29 | 1 |
retina | 5.89e-20 | 6 |
photoreceptor array | 5.89e-20 | 6 |
posterior segment of eyeball | 5.89e-20 | 6 |
uterine epithelium | 1.33e-15 | 2 |
cervix epithelium | 1.33e-15 | 2 |
neural tissue | 1.78e-15 | 2 |
multi cell component structure | 1.78e-15 | 2 |
neuron projection bundle | 1.78e-15 | 2 |
layer of retina | 2.11e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.60e-10 | 11 |
cervical cancer | 5.08e-07 | 5 |