FFCP PHASE1:Hg19::chr19:47231612..47231624,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:47231612..47231624,- | |||
|coexpression_cluster_id=C140 | |coexpression_cluster_id=C140 | ||
|description=CAGE_peak_at_chr19:47231612..47231624,- | |description=CAGE_peak_at_chr19:47231612..47231624,- | ||
|id=chr19:47231612..47231624,- | |id=chr19:47231612..47231624,- | ||
|ontology_enrichment_celltype=CL:0000115!1.51e-52!35;CL:0002139!3.53e-52!24;CL:0002078!1.24e-40!44;CL:0000071!7.77e-31!18;CL:0002546!7.77e-31!18;CL:0000213!4.49e-30!57;CL:0000215!4.49e-30!57;CL:0005020!6.67e-25!6;CL:0002138!6.67e-25!6;CL:0005022!6.67e-25!6;CL:0002543!6.75e-17!6;CL:0002618!1.57e-12!3;CL:0000222!1.48e-11!119;CL:1000413!1.52e-11!9;CL:0002544!1.65e-11!6;CL:0002262!1.06e-09!2;CL:1000398!1.06e-09!2;CL:0002545!1.74e-09!2;CL:0000076!4.25e-07!62 | |ontology_enrichment_celltype=CL:0000115!1.51e-52!35;CL:0002139!3.53e-52!24;CL:0002078!1.24e-40!44;CL:0000071!7.77e-31!18;CL:0002546!7.77e-31!18;CL:0000213!4.49e-30!57;CL:0000215!4.49e-30!57;CL:0005020!6.67e-25!6;CL:0002138!6.67e-25!6;CL:0005022!6.67e-25!6;CL:0002543!6.75e-17!6;CL:0002618!1.57e-12!3;CL:0000222!1.48e-11!119;CL:1000413!1.52e-11!9;CL:0002544!1.65e-11!6;CL:0002262!1.06e-09!2;CL:1000398!1.06e-09!2;CL:0002545!1.74e-09!2;CL:0000076!4.25e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.50e-37;24!CL:0000115;1.99e-36;36!CL:0002262;2.06e-29;2!CL:1000398;2.06e-29;2!CL:0002078;3.71e-23;45!CL:0002138;6.93e-22;6!CL:0002144;5.63e-20;3!CL:0000071;8.86e-20;18!CL:0000213;7.77e-17;58!CL:0000215;7.77e-17;58!CL:0002544;2.40e-10;6!CL:0002545;2.31e-08;2!CL:1000413;3.44e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.80e-46,36;CL:0002139,3.91e-37,24;CL:0002078,5.39e-37,45;CL:0002262,2.22e-29,2;CL:1000398,2.22e-29,2;CL:0000213,1.73e-28,58;CL:0000215,1.73e-28,58;CL:0005020,8.29e-22,6;CL:0002138,8.29e-22,6;CL:0005022,8.29e-22,6;CL:0002144,6.50e-20,3;CL:0000071,7.14e-20,18;CL:0002546,7.14e-20,18;CL:0000222,4.36e-13,121;CL:0002544,1.73e-10,6;CL:0002545,1.86e-08,2;CL:1000413,2.77e-07,9 | |||
|ontology_enrichment_development_v019=CL:0005022;6.93e-22;6!CL:0002546;8.86e-20;18!UBERON:0004872;4.13e-09;7!CL:0000222;3.42e-07;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!7.77e-31!18;UBERON:0004638!7.77e-31!18;UBERON:0004852!7.77e-31!18;UBERON:0000487!9.87e-25!22;UBERON:0006914!1.95e-21!25;UBERON:0002465!1.74e-19!10;UBERON:0000055!2.49e-19!69;UBERON:0001473!1.63e-18!8;UBERON:0004536!1.63e-18!8;UBERON:0006558!1.63e-18!8;UBERON:0002049!2.98e-16!79;UBERON:0007798!2.98e-16!79;UBERON:0000477!9.46e-13!286;UBERON:0004111!2.02e-12!241;UBERON:0003915!1.52e-11!9;UBERON:0004700!1.52e-11!9;UBERON:0001917!1.52e-11!9;UBERON:0004535!1.61e-11!110;UBERON:0001638!3.62e-11!9;UBERON:0003920!3.62e-11!9;UBERON:0004582!3.62e-11!9;UBERON:0001009!4.42e-11!113;UBERON:0001981!1.90e-10!60;UBERON:0007500!1.90e-10!60;UBERON:0004537!1.90e-10!60;UBERON:0006965!1.90e-10!60;UBERON:0004872!2.96e-10!84;UBERON:0005800!1.74e-09!2;UBERON:0001515!1.74e-09!2;UBERON:0003914!4.73e-08!118;UBERON:0002066!1.08e-07!5;UBERON:0000025!5.42e-07!194 | |ontology_enrichment_uberon=UBERON:0001986!7.77e-31!18;UBERON:0004638!7.77e-31!18;UBERON:0004852!7.77e-31!18;UBERON:0000487!9.87e-25!22;UBERON:0006914!1.95e-21!25;UBERON:0002465!1.74e-19!10;UBERON:0000055!2.49e-19!69;UBERON:0001473!1.63e-18!8;UBERON:0004536!1.63e-18!8;UBERON:0006558!1.63e-18!8;UBERON:0002049!2.98e-16!79;UBERON:0007798!2.98e-16!79;UBERON:0000477!9.46e-13!286;UBERON:0004111!2.02e-12!241;UBERON:0003915!1.52e-11!9;UBERON:0004700!1.52e-11!9;UBERON:0001917!1.52e-11!9;UBERON:0004535!1.61e-11!110;UBERON:0001638!3.62e-11!9;UBERON:0003920!3.62e-11!9;UBERON:0004582!3.62e-11!9;UBERON:0001009!4.42e-11!113;UBERON:0001981!1.90e-10!60;UBERON:0007500!1.90e-10!60;UBERON:0004537!1.90e-10!60;UBERON:0006965!1.90e-10!60;UBERON:0004872!2.96e-10!84;UBERON:0005800!1.74e-09!2;UBERON:0001515!1.74e-09!2;UBERON:0003914!4.73e-08!118;UBERON:0002066!1.08e-07!5;UBERON:0000025!5.42e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;2.06e-29;2!UBERON:0003497;2.06e-29;2!UBERON:0003909;2.06e-29;2!UBERON:0003835;2.06e-29;2!UBERON:0002106;5.63e-20;3!UBERON:0010523;5.63e-20;3!UBERON:0001915;5.63e-20;3!UBERON:0001280;5.63e-20;3!UBERON:0004647;5.63e-20;3!UBERON:0001982;5.63e-20;3!UBERON:0004638;8.86e-20;18!UBERON:0001986;8.86e-20;18!UBERON:0004852;8.86e-20;18!UBERON:0001473;1.37e-16;8!UBERON:0004536;1.37e-16;8!UBERON:0006558;1.37e-16;8!UBERON:0000487;3.39e-16;22!UBERON:0000996;2.06e-15;1!UBERON:0006914;2.94e-14;25!UBERON:0002465;2.11e-13;10!UBERON:0000077;3.55e-13;27!UBERON:0002405;3.55e-13;27!UBERON:0004177;2.18e-12;5!UBERON:0005057;2.18e-12;5!UBERON:0000055;3.81e-12;65!UBERON:0000490;4.39e-11;33!UBERON:0000353;3.96e-09;15!UBERON:0003513;4.13e-09;7!UBERON:0004535;1.41e-08;109!UBERON:0005800;2.31e-08;2!UBERON:0001515;2.31e-08;2!UBERON:0002049;6.16e-08;75!UBERON:0007798;6.16e-08;75!UBERON:0007500;1.28e-07;56!UBERON:0001981;1.28e-07;56!UBERON:0004537;1.28e-07;56!UBERON:0003915;3.44e-07;9!UBERON:0004700;3.44e-07;9!UBERON:0001917;3.44e-07;9 | |||
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|short_description=p@chr19:47231612..47231624,- | |short_description=p@chr19:47231612..47231624,- | ||
}} | }} |
Latest revision as of 15:21, 27 July 2015
Short description: | p@chr19:47231612..47231624, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:47231612..47231624, - |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.80e-46 | 36 |
endothelial cell of vascular tree | 3.91e-37 | 24 |
meso-epithelial cell | 5.39e-37 | 45 |
endothelial cell of sinusoid | 2.22e-29 | 2 |
endothelial cell of hepatic sinusoid | 2.22e-29 | 2 |
lining cell | 1.73e-28 | 58 |
barrier cell | 1.73e-28 | 58 |
lymphangioblast | 8.29e-22 | 6 |
endothelial cell of lymphatic vessel | 8.29e-22 | 6 |
vascular lymphangioblast | 8.29e-22 | 6 |
capillary endothelial cell | 6.50e-20 | 3 |
blood vessel endothelial cell | 7.14e-20 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.14e-20 | 18 |
mesodermal cell | 4.36e-13 | 121 |
aortic endothelial cell | 1.73e-10 | 6 |
thoracic aorta endothelial cell | 1.86e-08 | 2 |
endothelial cell of artery | 2.77e-07 | 9 |