FFCP PHASE1:Hg19::chr19:54710115..54710150,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:54710115..54710150,+ | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_at_chr19:54710115..54710150,+ | |||
|id=chr19:54710115..54710150,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.53e-29!42;CL:0002194!2.03e-27!63;CL:0000576!2.03e-27!63;CL:0000040!2.03e-27!63;CL:0000559!2.03e-27!63;CL:0000860!1.21e-26!45;CL:0000766!1.72e-25!76;CL:0002009!1.94e-25!65;CL:0000839!1.26e-23!70;CL:0000557!8.82e-23!71;CL:0002087!1.06e-20!119;CL:0000738!1.29e-18!140;CL:0002031!9.73e-17!124;CL:0000763!4.96e-16!112;CL:0000049!4.96e-16!112;CL:0000037!1.27e-15!172;CL:0000566!1.27e-15!172;CL:0002032!3.92e-14!165;CL:0000837!3.92e-14!165;CL:0000988!1.44e-13!182;CL:0002393!4.25e-07!9;CL:0002397!4.25e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.30e-55;33!CL:0002057;1.30e-55;33!CL:0000473;3.87e-55;39!CL:0000234;3.87e-55;39!CL:0000576;4.64e-43;48!CL:0000766;9.27e-32;69!CL:0000763;1.43e-14;100!CL:0000235;8.85e-12;6!CL:0002087;9.29e-11;104!CL:0000738;1.74e-09;136!CL:0002393;2.40e-08;6!CL:0002397;2.40e-08;6!CL:0000875;1.04e-07;3!CL:0002396;1.04e-07;3!CL:0000767;5.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.75e-85,48;CL:0000234,2.75e-85,48;CL:0000860,1.13e-74,42;CL:0002057,1.13e-74,42;CL:0002194,3.19e-71,59;CL:0000576,3.19e-71,59;CL:0000040,3.19e-71,59;CL:0000559,3.19e-71,59;CL:0002009,2.13e-68,61;CL:0000766,2.03e-66,72;CL:0000839,4.46e-62,66;CL:0000557,6.33e-61,67;CL:0000763,2.87e-42,108;CL:0000049,2.87e-42,108;CL:0002087,8.00e-40,115;CL:0000738,3.86e-37,136;CL:0002031,2.27e-34,120;CL:0000037,4.74e-29,168;CL:0002032,1.31e-28,161;CL:0000837,1.31e-28,161;CL:0000988,1.16e-26,177;CL:0002393,2.01e-14,9;CL:0002397,2.01e-14,9;CL:0000134,8.20e-13,354;CL:0002320,3.47e-12,361;CL:0000235,1.51e-11,6;CL:0000048,9.05e-11,427;CL:0000219,1.49e-10,386;CL:0000723,2.46e-10,433;CL:0000034,2.88e-10,441;CL:0000875,1.05e-07,3;CL:0002396,1.05e-07,3;CL:0000767,5.47e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-53;42!CL:0000049;4.01e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.74e-22!102;UBERON:0003061!1.74e-22!102;UBERON:0002371!7.09e-20!80;UBERON:0002193!8.44e-19!112;UBERON:0001474!2.94e-18!86;UBERON:0004765!2.72e-16!101;UBERON:0001434!2.72e-16!101;UBERON:0002405!4.72e-13!115;UBERON:0003081!1.25e-10!216;UBERON:0002204!1.32e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.39e-54,76;UBERON:0002390,9.21e-52,98;UBERON:0003061,9.21e-52,98;UBERON:0001474,3.07e-49,82;UBERON:0002193,2.08e-47,108;UBERON:0002405,1.05e-45,93;UBERON:0004765,1.74e-43,90;UBERON:0001434,1.36e-37,100;UBERON:0003081,6.45e-30,203;UBERON:0002204,3.54e-21,167;UBERON:0000926,5.06e-15,315;UBERON:0004120,5.06e-15,315;UBERON:0006603,5.06e-15,315;UBERON:0002384,2.45e-11,371 | |||
|phase1_expression=0,0.856402095563933,0.140954404095971,0,0,1.74467704820074,0,0.631719873426831,1.82829939739887,0,0.697801167972428,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,0,0.204000691244253,0.626909442956176,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0.236132343941038,3.93364276848904,4.60595277716655,7.58599004248772,0.919421224478927,0.90361775633475,1.47901604066715,0.0774672005803016,0.142169232487422,0.880801318004542,1.66198622559563,0.601633342410425,1.95309783644267,2.23915474239924,0.647787332037959,0,5.67053131240302,4.53451132426571,3.63876091781724,6.0431549595478,4.93401465626191,7.74265927237759,6.04154023876516,7.17249978281482,12.0605937243178,4.48169384957604,4.51839278508678,5.41705946377367,7.9061782607894,4.63940455098338,6.51698104890745,6.42776173978895,4.49300637906531,3.83602275479425,9.56568770541477,11.1699648268114,10.6556187633174,6.09439401120026,2.8369261234557,2.4912889959823,10.0499466102697,13.5585558789252,9.33912032232002,3.63239701580021,5.15588690382591,6.96217252369946,8.87272202510155,17.2209482971685,11.1119082119439,1.34794357375794,2.4028302854641,2.4108838004562,21.6609685243349,24.267834618289,19.5450644528158,1.75996244461323,0.546138611262131,0.889509253863555,0.853460445133014,0.400395987036012,0,0.661044872784862,0,0,1.76171156811282,0.764546456250458,0,1.12101712596307,0.263384084775077,0,1.57204305099666,0.205601498999509,0.501559486172034,0.651844533267181,0.473447805734733,0,0.557052284425868,0.294605907474837,0.664601683750863,0,0.25618263945135,0.390178042679635,0.164437904603676,0.552700035571697,0,0.444859689486181,0,0,0.339928028092699,0.383220493601921,0,0.253019692019503,1.27426165729639,0,0,0.150575119077773,0,0,0.473554504088034,0.821127996921047,0,0.534880391567015,0.434473211648397,0,0,0,0,0,0.434539556882471,0,0,0.0945348171640679,0.443458794925128,0.527008714158756,0,0.364295288292542,0,0.97364218096405,0.522389211897802,3.19099105245276,0.238490624305342,0.571994910780128,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,1.10047216776027,1.46296476575767,0.258416759169329,0,0,0,0.760272105718513,0.732186172644509,0,1.62028389576352,0.17859945656816,0,0.337834441449967,0,0,0.183201743930407,1.31780417436063,0,0.436094052142534,0,0.379891534993739,0,0,0,0.560677600142307,0,0.98667019366864,0,0,0,0,0,0,0,0,0.448346041655403,0.117434498643765,0,0,0.204154171254893,0.368502951935304,0.206651562351531,1.18800285728205,0.989067717114227,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0.612975591598039,0.45071417671979,0.453728732640084,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0.355009592516614,0,0,0.386521706326594,0,0.286804595389004,0.365921118388786,0.132529768321485,0,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0.241011029883482,0.220587945464788,0,0.71181185733329,0.404493924480493,0,0,0,0,0.4115740113314,1.47008711385542,2.53510069643662,0.982827216677626,0,0.882926198829301,0.245976877086227,0.171567810298526,0.109750285408626,0,0.402115889646523,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,1.58040879591855,0.858486162094873,3.20082107913617,4.91408956792399,3.56714789492948,0.93733833986777,0,0,0.0895585227028483,0.290633938513962,0.766765358330422,0,0.088048434013226,0,0.864719720501769,0.37872730027914,0,0.381988425558278,0,1.71072446022705,0.205654985406647,0.300343057843917,0.571652865261156,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0.845302752556,0.531876233169741,1.04007436911366,0,2.83698264046557,0.266422179016099,0,0.542621605391443,1.64648067356154,0,0,2.37585561880029,0,0.871533458600294,0.499864955910285,7.29742683847143,1.00451418286425,6.32501818449095,0,0,1.42636905040718,0,0.410952645100767,0.179060963239896,0,0,0.862510299438069,0.385029108839245,0,1.30139853857622,0,0.335032530668698,0.637938751653163,0.749007023947182,0,0,0,0,0.542530047399471,0.207970861530807,0.356857977594324,0.157702415033935,0.234282829985426,0.902838299183157,2.27407504055985,2.0694614258501,0.664225598535437,0.921845842708516,0.521301686808497,0,0,2.89475236572042,1.2942852049117,0.640365346820666,0.303127571446259,1.66435439510497,0.604780586659361,0.248107807818777,0,0.280660094433074,0,0.511707249066704,0.160853921143607,1.48418066444991,0.462629081407967,0.710246901252508,0.0821271560138091,0.519254429183621,0.116210378459959,0.120859449591622,0.200506470303285,0.368323955743585,0.34444334449382,0.910455840033585,0.655622074797121,0,0.15403067420883,0,1.46139224653261,0.105551628892876,0,0,0.215915916102139,0,0,0.501689773854853,0,0.831076008928724,0.895499018888713,0,0,0,0,0,0.721287081534056,0.183138929636687,0.082509499920588,0,1.30012049207304,1.6068392984416,0.096670718292122,0.462145851343933,0,0.275673144969061,0.107420244868274,0.145016693914229,0.340906509664404,0.0890320356467374,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0.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| |||
|short_description=p@chr19:54710115..54710150,+ | |||
}} |
Latest revision as of 17:10, 27 July 2015
Short description: | p@chr19:54710115..54710150, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:54710115..54710150, + |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.39e-54 | 76 |
hematopoietic system | 9.21e-52 | 98 |
blood island | 9.21e-52 | 98 |
bone element | 3.07e-49 | 82 |
hemolymphoid system | 2.08e-47 | 108 |
immune system | 1.05e-45 | 93 |
skeletal element | 1.74e-43 | 90 |
skeletal system | 1.36e-37 | 100 |
lateral plate mesoderm | 6.45e-30 | 203 |
musculoskeletal system | 3.54e-21 | 167 |
mesoderm | 5.06e-15 | 315 |
mesoderm-derived structure | 5.06e-15 | 315 |
presumptive mesoderm | 5.06e-15 | 315 |
connective tissue | 2.45e-11 | 371 |