FFCP PHASE1:Hg19::chr19:6707160..6707186,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:6707160..6707186,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr19:6707160..6707186,- | |description=CAGE_peak_at_chr19:6707160..6707186,- | ||
|id=chr19:6707160..6707186,- | |id=chr19:6707160..6707186,- | ||
|ontology_enrichment_celltype=CL:0000181!4.16e-07!12;CL:0000417!4.16e-07!12;CL:0000668!4.16e-07!12;CL:0000414!4.16e-07!12;CL:0000412!4.16e-07!12;CL:0000182!4.16e-07!12 | |ontology_enrichment_celltype=CL:0000181!4.16e-07!12;CL:0000417!4.16e-07!12;CL:0000668!4.16e-07!12;CL:0000414!4.16e-07!12;CL:0000412!4.16e-07!12;CL:0000182!4.16e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.33e-28;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.48e-28,12;CL:0000223,2.22e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.56e-22;11!UBERON:0009497;5.36e-19;13!UBERON:0003104;5.00e-17;31!UBERON:0007297;1.80e-14;2!UBERON:0001041;1.33e-10;30!UBERON:0010227;1.88e-08;1!UBERON:0005754;4.40e-08;1!UBERON:0005062;7.43e-08;4!UBERON:0007284;7.43e-08;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.03e-22!115;UBERON:0000477!7.93e-14!286;UBERON:0004111!1.01e-13!241;UBERON:0000025!1.08e-12!194;UBERON:0000483!1.38e-09!309;UBERON:0000481!2.66e-09!347;UBERON:0000119!2.81e-09!312;UBERON:0003914!1.81e-07!118;UBERON:0002107!1.91e-07!19;UBERON:0006925!1.91e-07!19;UBERON:0008836!1.91e-07!19;UBERON:0009497!5.31e-07!25;UBERON:0000015!5.31e-07!25;UBERON:0002423!5.31e-07!25;UBERON:0006235!5.31e-07!25;UBERON:0004161!5.31e-07!25;UBERON:0009854!9.23e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.62e-29;19!UBERON:0006925;6.62e-29;19!UBERON:0002423;1.24e-21;25!UBERON:0002365;2.61e-16;31!UBERON:0002330;2.61e-16;31!UBERON:0002081;3.36e-15;2!UBERON:0002133;7.83e-15;2!UBERON:0002368;1.55e-14;33!UBERON:0004151;1.95e-10;3!UBERON:0003978;3.42e-10;3!UBERON:0000946;3.42e-10;3!UBERON:0006947;5.94e-10;3!UBERON:0004054;5.94e-10;3!UBERON:0000949;2.04e-09;43!UBERON:0000029;1.88e-08;1!UBERON:0002079;1.88e-08;1!UBERON:0002134;1.88e-08;1!UBERON:0005208;1.88e-08;1!UBERON:0004145;1.88e-08;1!UBERON:0005946;1.88e-08;1!UBERON:0005965;1.88e-08;1!UBERON:0002078;1.88e-08;1!UBERON:0002530;3.52e-08;57!UBERON:0000998;4.40e-08;1!UBERON:0002135;4.40e-08;1!UBERON:0001301;4.40e-08;1!UBERON:0001282;4.40e-08;1!UBERON:0002171;4.40e-08;1!UBERON:0006868;4.40e-08;1!UBERON:0009842;4.40e-08;1!UBERON:0003704;4.40e-08;1!UBERON:0006518;4.40e-08;1!UBERON:0008949;4.40e-08;1!UBERON:0000101;4.40e-08;1!UBERON:0001171;4.40e-08;1!UBERON:0001172;4.40e-08;1!UBERON:0002167;4.40e-08;1!UBERON:0005904;1.12e-07;4!UBERON:0005172;9.48e-07;52!UBERON:0005173;9.48e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.46e-29,19;UBERON:0006925,5.46e-29,19;UBERON:0008836,5.46e-29,19;UBERON:0008835,7.58e-25,22;UBERON:0003894,7.58e-25,22;UBERON:0009854,1.05e-23,23;UBERON:0007499,1.07e-21,25;UBERON:0009497,1.07e-21,25;UBERON:0000015,1.07e-21,25;UBERON:0002423,1.07e-21,25;UBERON:0006235,1.07e-21,25;UBERON:0004161,1.07e-21,25;UBERON:0009856,8.30e-21,26;UBERON:0002365,3.19e-17,31;UBERON:0002330,3.19e-17,31;UBERON:0002081,2.92e-15,2;UBERON:0010227,2.92e-15,2;UBERON:0002368,4.33e-15,35;UBERON:0002133,5.92e-15,2;UBERON:0005172,7.73e-14,54;UBERON:0005173,7.73e-14,54;UBERON:0002530,1.88e-12,59;UBERON:0002417,2.94e-12,60;UBERON:0000916,2.94e-12,60;UBERON:0000949,2.04e-11,45;UBERON:0003929,2.18e-11,54;UBERON:0003914,1.49e-10,117;UBERON:0004151,1.78e-10,3;UBERON:0003978,2.84e-10,3;UBERON:0009751,2.84e-10,3;UBERON:0000946,2.84e-10,3;UBERON:0002523,2.84e-10,3;UBERON:0005983,2.84e-10,3;UBERON:0002165,2.84e-10,3;UBERON:0002062,2.84e-10,3;UBERON:0007280,2.84e-10,3;UBERON:0006947,5.68e-10,3;UBERON:0004054,5.68e-10,3;UBERON:0002079,1.41e-08,1;UBERON:0000029,1.52e-08,1;UBERON:0005911,1.96e-08,82;UBERON:0002134,2.17e-08,1;UBERON:0005208,2.17e-08,1;UBERON:0005946,2.17e-08,1;UBERON:0005965,2.17e-08,1;UBERON:0002078,2.17e-08,1;UBERON:0002135,2.89e-08,1;UBERON:0002171,3.10e-08,1;UBERON:0006518,3.10e-08,1;UBERON:0008949,3.10e-08,1;UBERON:0000101,3.10e-08,1;UBERON:0002167,3.10e-08,1;UBERON:0000025,3.79e-08,192;UBERON:0001301,3.83e-08,1;UBERON:0001282,4.11e-08,1;UBERON:0009842,4.11e-08,1;UBERON:0003704,4.11e-08,1;UBERON:0001171,4.11e-08,1;UBERON:0001172,4.11e-08,1;UBERON:0000998,4.72e-08,1;UBERON:0006868,4.72e-08,1;UBERON:0005177,8.14e-08,101;UBERON:0005904,1.08e-07,4;UBERON:0004111,1.30e-07,240;UBERON:0005256,3.29e-07,122;UBERON:0001048,5.74e-07,160;UBERON:0003104,6.82e-07,160;UBERON:0009142,6.82e-07,160;UBERON:0009569,7.75e-07,112 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22031028774085,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0.448346041655403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423863802319124,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,65.912618107352,44.2272247504932,7.68026878685825,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1100756394171,0.871533458600294,1.3996218765488,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0.519254429183621,0,0.241718899183244,1.00253235151642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0.661139661443912,0,0,0,0,0,0,0.616067160352178,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0.974853958525138,0,0,0,0,0,0.66343897524122,0,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,2.44773882019626,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.422008249231538,0.222617410045812,0,0,0.996239941255349,0.552567831062295,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0.153900517007594,1.36730467016401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.979396848954886,0,0,0,0.176915129006678,0,0,0,0,0.269604531922708,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0.387025325156341,0.0730893170861856,0.246346371159628,0.290967049465258,0,0.225980740780532,0,0,0,0,0.480952921509202,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,1.67569440763353,0.229160424011684,2.15361907373044,0,0.429226048136571,0.223171457441873,0,0,0,2.28471228690949,2.39005989305383,1.61768505250044,0,0,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.394028536495991,0.0524545881349981,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0,0,0,0,0,14.215566666774,7.95041333473328,0,0.52893040697076,0,0,0.533937062838473,0.314408610199332,1.65695622138878,2.48083010905975,0,0,0,0,0,0,0,0,0,0.244052529803926,0.500763722825999,0.573409195690071,0.887432412294818,0.310482014706917,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.457680136793847,0.151230923763239,0,0.147855149989634,0,0.899606224327209,0.155262956876259,0,0,0,0.901545653983311,0.380805212168795,0.406870733204662,0,0.644463342254931,0,0,0,0,0,0,0,0.428883182749851,0.260994291965212,0,0,0.489473409012935,0,0.617602894321944,0.219284049578707,0,0.38582807654183,0.675769762612291,0,0,0,0.414775308455192,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,1.27857558193737,0,0,0,0.163771917510097,0,0.0675375846183947,0,1.03343398250592,0,0,0,0,0,1.91643641459393,0,0,0,0,0,0,0.342976018874837,0.0679697329768317,0.197318320688547,0,0,0.313972371402056,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0,0.17071847709395,0.691259661814092,0,0.118332000730565,0,1.27016115057279,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0.245148321753905,0,0,0.594092800654172,0,0,0,0.128915775947154,0,0.178553938605658,0,0,0,0.458729283404541,0.573358332605805,0,0.0679914901909147,0,0.5290268405154,0.371995018166751,0,0,0,0.109265571963696,0,0,0.26721740526556,0,0,0.454672189309436,0,0,0.620597975171371,0.213233981900981,0,0,0.186224142887574,0,0.25458863311266,0,0,0,0.202056159043763,0.430333232356058,0.332660356546013,0.162806537221949,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22031028774085,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0.448346041655403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423863802319124,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,65.912618107352,44.2272247504932,7.68026878685825,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1100756394171,0.871533458600294,1.3996218765488,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0.519254429183621,0,0.241718899183244,1.00253235151642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0.661139661443912,0,0,0,0,0,0,0.616067160352178,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0.974853958525138,0,0,0,0,0,0.66343897524122,0,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,2.44773882019626,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.422008249231538,0.222617410045812,0,0,0.996239941255349,0.552567831062295,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0.153900517007594,1.36730467016401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.979396848954886,0,0,0,0.176915129006678,0,0,0,0,0.269604531922708,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0.387025325156341,0.0730893170861856,0.246346371159628,0.290967049465258,0,0.225980740780532,0,0,0,0,0.480952921509202,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,1.67569440763353,0.229160424011684,2.15361907373044,0,0.429226048136571,0.223171457441873,0,0,0,2.28471228690949,2.39005989305383,1.61768505250044,0,0,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.394028536495991,0.0524545881349981,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0,0,0,0,0,14.215566666774,7.95041333473328,0,0.52893040697076,0,0,0.533937062838473,0.314408610199332,1.65695622138878,2.48083010905975,0,0,0,0,0,0,0,0,0,0.244052529803926,0.500763722825999,0.573409195690071,0.887432412294818,0.310482014706917,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.457680136793847,0.151230923763239,0,0.147855149989634,0,0.899606224327209,0.155262956876259,0,0,0,0.901545653983311,0.380805212168795,0.406870733204662,0,0.644463342254931,0,0,0,0,0,0,0,0.428883182749851,0.260994291965212,0,0,0.489473409012935,0,0.617602894321944,0.219284049578707,0,0.38582807654183,0.675769762612291,0,0,0,0.414775308455192,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,1.27857558193737,0,0,0,0.163771917510097,0,0.0675375846183947,0,1.03343398250592,0,0,0,0,0,1.91643641459393,0,0,0,0,0,0,0.342976018874837,0.0679697329768317,0.197318320688547,0,0,0.313972371402056,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0,0.17071847709395,0.691259661814092,0,0.118332000730565,0,1.27016115057279,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0.245148321753905,0,0,0.594092800654172,0,0,0,0.128915775947154,0,0.178553938605658,0,0,0,0.458729283404541,0.573358332605805,0,0.0679914901909147,0,0.5290268405154,0.371995018166751,0,0,0,0.109265571963696,0,0,0.26721740526556,0,0,0.454672189309436,0,0,0.620597975171371,0.213233981900981,0,0,0.186224142887574,0,0.25458863311266,0,0,0,0.202056159043763,0.430333232356058,0.332660356546013,0.162806537221949,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr19:6707160..6707186,- | |short_description=p@chr19:6707160..6707186,- | ||
}} | }} |
Latest revision as of 18:16, 27 July 2015
Short description: | p@chr19:6707160..6707186, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:6707160..6707186, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.48e-28 | 12 |
endodermal cell | 2.22e-08 | 58 |