FFCP PHASE1:Hg19::chr1:152412443..152412445,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:152412443..152412445,+ | |||
|description=CAGE_peak_at_chr1:152412443..152412445,+ | |description=CAGE_peak_at_chr1:152412443..152412445,+ | ||
|id=chr1:152412443..152412445,+ | |id=chr1:152412443..152412445,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002579;1.93e-07;3!CL:0000632;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,1.93e-07,3;CL:0000632,2.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.71e-19;1!UBERON:0003852;2.71e-19;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3571;2.71e-19;1!DOID:3350;2.48e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,3.91e-19,1;DOID:3350,2.99e-10,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0005705;2.71e-19;1!UBERON:0008193;2.71e-19;1!UBERON:0010912;2.71e-19;1!UBERON:0002514;2.71e-19;1!UBERON:0003457;2.71e-19;1!UBERON:0008907;2.71e-19;1!UBERON:0008001;2.71e-19;1!UBERON:0007213;2.71e-19;1!UBERON:0009891;2.71e-19;1!UBERON:0007914;2.71e-19;1!UBERON:0007375;2.71e-19;1!UBERON:0003323;2.71e-19;1!UBERON:0010258;2.71e-19;1!UBERON:0005253;2.71e-19;1!UBERON:0007842;2.71e-19;1!UBERON:0002397;2.71e-19;1!UBERON:0003113;2.71e-19;1!UBERON:0003277;2.71e-19;1!UBERON:0001709;2.71e-19;1!UBERON:0002244;2.71e-19;1!UBERON:0005620;2.71e-19;1!UBERON:0010364;2.71e-19;1!UBERON:0004288;2.71e-19;1!UBERON:0004089;2.48e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,1.30e-19,1;UBERON:0008193,1.30e-19,1;UBERON:0010912,1.30e-19,1;UBERON:0002514,1.30e-19,1;UBERON:0003457,1.30e-19,1;UBERON:0008907,1.30e-19,1;UBERON:0008001,1.30e-19,1;UBERON:0007213,1.30e-19,1;UBERON:0009891,1.30e-19,1;UBERON:0007914,1.30e-19,1;UBERON:0009292,1.30e-19,1;UBERON:0003099,1.30e-19,1;UBERON:0007375,1.30e-19,1;UBERON:0003323,1.30e-19,1;UBERON:0010258,1.30e-19,1;UBERON:0007842,1.30e-19,1;UBERON:0009494,1.30e-19,1;UBERON:0010042,1.30e-19,1;UBERON:0010045,1.30e-19,1;UBERON:0010259,1.30e-19,1;UBERON:0010359,1.30e-19,1;UBERON:0009526,1.30e-19,1;UBERON:0002397,1.30e-19,1;UBERON:0003113,1.30e-19,1;UBERON:0003277,1.30e-19,1;UBERON:0001709,1.30e-19,1;UBERON:0004066,1.30e-19,1;UBERON:0002244,1.30e-19,1;UBERON:0005620,1.30e-19,1;UBERON:0004362,1.30e-19,1;UBERON:0010364,1.30e-19,1;UBERON:0010046,1.30e-19,1;UBERON:0005868,1.30e-19,1;UBERON:0007238,1.30e-19,1;UBERON:0004288,1.30e-19,1;UBERON:0004068,1.30e-19,1;UBERON:0010334,1.30e-19,1;UBERON:0003852,1.30e-19,1;UBERON:0010253,1.30e-19,1;UBERON:0005253,1.72e-10,2;UBERON:0004089,1.72e-10,2 | |||
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| ||
|short_description=p@chr1:152412443..152412445,+ | |short_description=p@chr1:152412443..152412445,+ | ||
}} | }} |
Latest revision as of 21:34, 27 July 2015
Short description: | p@chr1:152412443..152412445, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:152412443..152412445, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 1.93e-07 | 3 |
hepatic stellate cell | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 3.91e-19 | 1 |
mesenchymal cell neoplasm | 2.99e-10 | 2 |