FFCP PHASE1:Hg19::chr1:158326653..158326662,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:158326653..158326662,+ | |||
|coexpression_cluster_id=C419 | |coexpression_cluster_id=C419 | ||
|description=CAGE_peak_at_chr1:158326653..158326662,+ | |description=CAGE_peak_at_chr1:158326653..158326662,+ | ||
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|ontology_enrichment_celltype=CL:0000840!3.40e-30!5;CL:0001029!3.40e-30!5;CL:0000990!2.11e-20!8;CL:0000451!7.90e-17!10;CL:0001014!3.70e-11!2;CL:0001016!3.70e-11!2 | |ontology_enrichment_celltype=CL:0000840!3.40e-30!5;CL:0001029!3.40e-30!5;CL:0000990!2.11e-20!8;CL:0000451!7.90e-17!10;CL:0001014!3.70e-11!2;CL:0001016!3.70e-11!2 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.03e-11;25 | |ontology_enrichment_celltype_v019=CL:0000084;1.03e-11;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.03e-11,25;CL:0000827,1.03e-11,25 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1036;1.30e-09;8 | |ontology_enrichment_disease_v019=DOID:1036;1.30e-09;8 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,1.35e-09,8;DOID:1240,6.60e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002370!6.33e-21!4;UBERON:0005058!6.33e-21!4;UBERON:0009113!6.33e-21!4;UBERON:0003295!6.33e-21!4;UBERON:0005562!6.33e-21!4;UBERON:0003351!2.66e-14!6;UBERON:0004177!2.12e-12!7;UBERON:0000974!5.80e-09!10;UBERON:0003408!5.80e-09!10;UBERON:0001042!5.80e-09!10;UBERON:0009145!5.80e-09!10;UBERON:0006562!3.14e-08!11;UBERON:0009722!3.14e-08!11;UBERON:0007690!3.14e-08!11 | |ontology_enrichment_uberon=UBERON:0002370!6.33e-21!4;UBERON:0005058!6.33e-21!4;UBERON:0009113!6.33e-21!4;UBERON:0003295!6.33e-21!4;UBERON:0005562!6.33e-21!4;UBERON:0003351!2.66e-14!6;UBERON:0004177!2.12e-12!7;UBERON:0000974!5.80e-09!10;UBERON:0003408!5.80e-09!10;UBERON:0001042!5.80e-09!10;UBERON:0009145!5.80e-09!10;UBERON:0006562!3.14e-08!11;UBERON:0009722!3.14e-08!11;UBERON:0007690!3.14e-08!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;7.04e-34;2!UBERON:0005058;7.04e-34;2!UBERON:0009113;7.04e-34;2!UBERON:0004177;1.83e-14;5!UBERON:0005057;1.83e-14;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;7.04e-34;2!UBERON:0005058;7.04e-34;2!UBERON:0009113;7.04e-34;2!UBERON:0004177;1.83e-14;5!UBERON:0005057;1.83e-14;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.03e-17,4;UBERON:0005058,1.03e-17,4;UBERON:0009113,1.03e-17,4;UBERON:0003295,1.03e-17,4;UBERON:0005562,1.03e-17,4;UBERON:0003351,2.74e-12,6;UBERON:0004177,9.89e-11,7;UBERON:0005057,9.89e-11,7;UBERON:0000974,6.56e-08,10;UBERON:0003408,6.56e-08,10;UBERON:0001042,6.56e-08,10;UBERON:0009145,6.56e-08,10;UBERON:0006562,2.63e-07,11;UBERON:0009722,2.63e-07,11;UBERON:0007690,2.63e-07,11 | |||
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|short_description=p@chr1:158326653..158326662,+ | |short_description=p@chr1:158326653..158326662,+ | ||
}} | }} |
Latest revision as of 22:57, 27 July 2015
Short description: | p@chr1:158326653..158326662, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:158326653..158326662, + |
Coexpression cluster: | C419_acute_chronic_thymus_xeroderma_Burkitt_Hodgkin_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.03e-11 | 25 |
pro-T cell | 1.03e-11 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.03e-17 | 4 |
hemolymphoid system gland | 1.03e-17 | 4 |
thymic region | 1.03e-17 | 4 |
pharyngeal gland | 1.03e-17 | 4 |
thymus primordium | 1.03e-17 | 4 |
pharyngeal epithelium | 2.74e-12 | 6 |
hemopoietic organ | 9.89e-11 | 7 |
immune organ | 9.89e-11 | 7 |
neck | 6.56e-08 | 10 |
gland of gut | 6.56e-08 | 10 |
chordate pharynx | 6.56e-08 | 10 |
pharyngeal region of foregut | 6.56e-08 | 10 |
pharynx | 2.63e-07 | 11 |
entire pharyngeal arch endoderm | 2.63e-07 | 11 |
early pharyngeal endoderm | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.35e-09 | 8 |
leukemia | 6.60e-08 | 39 |